BLASTX nr result

ID: Panax21_contig00022905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022905
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   176   1e-42
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
gb|EAZ32514.1| hypothetical protein OsJ_16734 [Oryza sativa Japo...   152   4e-35
gb|EAY96160.1| hypothetical protein OsI_18041 [Oryza sativa Indi...   152   4e-35

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  176 bits (447), Expect = 1e-42
 Identities = 91/117 (77%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350  APPVERFLHDLLQYALGVLHIVTLVPYSRKLIVNATLSNDRVGITVILDAANGAGYVEPE 171
            APPVER+LHDLLQYALGVLHIVTLVPYSRKLIVN TLSN+RVGI VILDAANGA +V+PE
Sbjct: 959  APPVERYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLSNNRVGIAVILDAANGASFVDPE 1018

Query: 170  IIQPALSLLVNLVCPPPSISNKPPLLTQGQQSI-VQTSNGPTVEMRDRNAERNITDR 3
            IIQPAL++LVNLVCPPPSIS KPP+L QGQQS  VQTSNGP +E R      N T +
Sbjct: 1019 IIQPALNVLVNLVCPPPSISLKPPVLAQGQQSASVQTSNGPAMEARVSAVSINSTSQ 1075


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  167 bits (423), Expect = 8e-40
 Identities = 85/99 (85%), Positives = 92/99 (92%), Gaps = 1/99 (1%)
 Frame = -1

Query: 350  APPVERFLHDLLQYALGVLHIVTLVPYSRKLIVNATLSNDRVGITVILDAANGAGYVEPE 171
            APPVER+LHDLLQYALGVLHIVTLVPYSRKLIVN TLSN+RVGI VILDAANGA +V+PE
Sbjct: 803  APPVERYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLSNNRVGIAVILDAANGASFVDPE 862

Query: 170  IIQPALSLLVNLVCPPPSISNKPPLLTQGQQSI-VQTSN 57
            IIQPAL++LVNLVCPPPSIS KPP+L QGQQS  VQTSN
Sbjct: 863  IIQPALNVLVNLVCPPPSISLKPPVLAQGQQSASVQTSN 901


>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
            predicted protein [Populus trichocarpa]
          Length = 1791

 Score =  152 bits (385), Expect = 2e-35
 Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 5/121 (4%)
 Frame = -1

Query: 350  APP-VERFLHDLLQYALGVLHIVTLVPYSRKLIVNATLSNDRVGITVILDAAN-GAGYVE 177
            APP VER+LHDLLQYA GVLHIVTLV  SRK+IVNATLSN+RVGI +ILDAAN  + YV+
Sbjct: 754  APPIVERYLHDLLQYAFGVLHIVTLVNDSRKMIVNATLSNNRVGIAIILDAANISSNYVD 813

Query: 176  PEIIQPALSLLVNLVCPPPSISNKPPLLTQGQQSIVQTSNGPTV---EMRDRNAERNITD 6
            PEIIQPAL++L+NLVCPPPSISNKPPL+  GQQS+   S+ P     +   RN E +  D
Sbjct: 814  PEIIQPALNVLINLVCPPPSISNKPPLIAPGQQSVSGQSSNPVQMPGQTEQRNGESSAVD 873

Query: 5    R 3
            R
Sbjct: 874  R 874


>gb|EAZ32514.1| hypothetical protein OsJ_16734 [Oryza sativa Japonica Group]
          Length = 1921

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/116 (65%), Positives = 89/116 (76%)
 Frame = -1

Query: 350  APPVERFLHDLLQYALGVLHIVTLVPYSRKLIVNATLSNDRVGITVILDAANGAGYVEPE 171
            APP +R+LHDL QYA GVLHI TLVPY RKLIV+ATLSN+RVG++V+LDAAN  GYV+PE
Sbjct: 858  APPTDRYLHDLTQYAFGVLHITTLVPYCRKLIVHATLSNNRVGMSVLLDAANSFGYVDPE 917

Query: 170  IIQPALSLLVNLVCPPPSISNKPPLLTQGQQSIVQTSNGPTVEMRDRNAERNITDR 3
            +I PAL++LVNLVCPPPSISNK       Q +  Q   G   E RDRNAE+  TDR
Sbjct: 918  VICPALNVLVNLVCPPPSISNKSSSTGNQQPAATQAVGGAFSENRDRNAEKCTTDR 973


>gb|EAY96160.1| hypothetical protein OsI_18041 [Oryza sativa Indica Group]
          Length = 1735

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/116 (65%), Positives = 89/116 (76%)
 Frame = -1

Query: 350  APPVERFLHDLLQYALGVLHIVTLVPYSRKLIVNATLSNDRVGITVILDAANGAGYVEPE 171
            APP +R+LHDL QYA GVLHI TLVPY RKLIV+ATLSN+RVG++V+LDAAN  GYV+PE
Sbjct: 777  APPTDRYLHDLTQYAFGVLHITTLVPYCRKLIVHATLSNNRVGMSVLLDAANSFGYVDPE 836

Query: 170  IIQPALSLLVNLVCPPPSISNKPPLLTQGQQSIVQTSNGPTVEMRDRNAERNITDR 3
            +I PAL++LVNLVCPPPSISNK       Q +  Q   G   E RDRNAE+  TDR
Sbjct: 837  VICPALNVLVNLVCPPPSISNKSSSTGNQQPAATQAVGGAFSENRDRNAEKCTTDR 892


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