BLASTX nr result

ID: Panax21_contig00022872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022872
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18786.1| class S F-box protein [Nicotiana alata]                 50   2e-19
gb|AAX19999.1| S-locus F-box protein [Prunus avium]                    52   7e-16
gb|ADZ76518.1| S-haplotype-specific F-box protein [Prunus pseudo...    48   1e-15
gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudo...    50   2e-15
gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifoli...    49   3e-15

>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score = 49.7 bits (117), Expect(3) = 2e-19
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
 Frame = -3

Query: 404 FHPIGNDYKFVRVVEV--------RKNSKGAEVYSANKNSWREIEGAPLNLPCY---SIF 258
           F  IGNDYKFVR+ EV         +  +  EVY    +SWR++      LP       F
Sbjct: 166 FDSIGNDYKFVRISEVFLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQCF 225

Query: 257 DVGLKGVLYWATLSCL----FTFDLNTEVFVVNHFPD--NVYD 147
           ++   G  +W  +  L      FD +TE+F     P+  N YD
Sbjct: 226 EMLHNGAFHWYAVGDLTYEILCFDFSTEIFRSMKMPESCNAYD 268



 Score = 48.9 bits (115), Expect(3) = 2e-19
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -1

Query: 826 ILSRLPIKSLLRFMIVSKRWYSLISYPSFIQLHLNLAT 713
           ILSR  +KSLLRF  +SK WY+LI   +FI +HLN +T
Sbjct: 18  ILSRFSVKSLLRFKFISKSWYTLIQSSTFINVHLNRST 55



 Score = 43.9 bits (102), Expect(3) = 2e-19
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
 Frame = -2

Query: 612 DLELPYCKGDFPLLPNFF---LVGCCNGIVCVTISGLYEDQLTYLWNPATKHSKLLPPS 445
           DL+LPY        PN+    LVG CNG++ +T     +D +  L+NPATK+  LLPPS
Sbjct: 96  DLDLPY----LTFTPNYHFNELVGPCNGLIVLTD----DDDIIVLFNPATKNYMLLPPS 146


>gb|AAX19999.1| S-locus F-box protein [Prunus avium]
          Length = 364

 Score = 51.6 bits (122), Expect(3) = 7e-16
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
 Frame = -3

Query: 431 WATLLSRVWFHPIGNDYKFVRVVEVRKNSKGAEVYSANKNSWREIEGAPLNLPCY----- 267
           +A L     FHP  NDYK VR++   KN+   EVYS   +SW+ IE  P  L C      
Sbjct: 153 FAYLALHFGFHPGINDYKAVRMMRTNKNALAVEVYSLRTDSWKMIEAIPPWLKCTWQHHK 212

Query: 266 -SIFDVGLKGVLYWATLSCLFTFDLNTEVFVVNHFPDNV 153
            + FD     ++    +  + +FD ++EVF     PD +
Sbjct: 213 GTFFDGVSYHIIEKGPIFSIVSFDSSSEVFEEFIAPDAI 251



 Score = 43.9 bits (102), Expect(3) = 7e-16
 Identities = 23/65 (35%), Positives = 32/65 (49%)
 Frame = -1

Query: 829 DILSRLPIKSLLRFMIVSKRWYSLISYPSFIQLHLNLATKNPQNDDSYIIHRTTTSKITY 650
           DIL RLP KSL+RF+  SK W  LI   SF  +HL+       +     +H     +  +
Sbjct: 12  DILVRLPAKSLVRFLCTSKLWSDLIGSSSFASMHLHRNVAKHAHVYLLCLHHPNVRRQVH 71

Query: 649 PSLPH 635
           P  P+
Sbjct: 72  PDDPY 76



 Score = 35.0 bits (79), Expect(3) = 7e-16
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -2

Query: 645 LFHINSPQNCLDLELPYCKGDFPLLPNFFLVGCCNGIVCVTISGLYEDQLTYLWNPATKH 466
           LF   + + C  L  P    ++     F + G  NG+VCV+   L  D   ++WNP+ + 
Sbjct: 85  LFSNETSEKCFKLCHPLGSTEY-----FVIYGSSNGLVCVSDEILNFDSPIHIWNPSVRK 139

Query: 465 SKLLPPS 445
            + +P S
Sbjct: 140 FRTIPMS 146


>gb|ADZ76518.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 377

 Score = 47.8 bits (112), Expect(3) = 1e-15
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = -1

Query: 829 DILSRLPIKSLLRFMIVSKRWYSLISYPSFIQLHLNLATKNPQNDDSYIIHRTTTSKITY 650
           DIL RLP KSL+RF+   K W  LI   SF+ +HLN   K   +     +H     ++  
Sbjct: 13  DILVRLPAKSLVRFLCTCKSWSDLIGSSSFVSIHLNRNVKKHAHVYLLCLHHPNFERLAD 72

Query: 649 PSLPH 635
           P  P+
Sbjct: 73  PDDPY 77



 Score = 46.6 bits (109), Expect(3) = 1e-15
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -3

Query: 404 FHPIGNDYKFVRVVEVRKNSKGAEVYSANKNSWREIEGAPLNLPCYSIFDVG--LKGVLY 231
           FHP  NDYK VR++   K++   EVYS   +SW+ IE  P  L C      G  L G+ Y
Sbjct: 163 FHPRVNDYKAVRLMRTNKSALAVEVYSLTTDSWKMIEVIPPWLKCSWKHHHGTFLNGIAY 222

Query: 230 W----ATLSCLFTFDLNTEVFVVNHFPDNVYDS 144
                  +  + +FD   E F     PD +  S
Sbjct: 223 HIIEKGPIFSIMSFDSGGEEFEEFIVPDAISSS 255



 Score = 35.4 bits (80), Expect(3) = 1e-15
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -2

Query: 645 LFHINSPQNCLDLELPYCKGDFPLLPNFFLVGCCNGIVCVTISGLYEDQLTYLWNPATKH 466
           LF   + + C  L  P  + ++     + + G  NG+VC++   L  D   ++WNP+ K 
Sbjct: 86  LFSNETFEECSKLTHPLGRTEY-----YGIYGTSNGLVCISDEILNFDSPIHIWNPSVKK 140

Query: 465 SKLLPPS 445
            +  PPS
Sbjct: 141 FRTPPPS 147


>gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 373

 Score = 50.1 bits (118), Expect(3) = 2e-15
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
 Frame = -3

Query: 404 FHPIGNDYKFVRVVEVRKNSKGAEVYSANKNSWREIEGAPLNLPCY------SIFDVGLK 243
           FHP  NDYK VR++   K++   EVYS   NSW+ IE  P  L C       + F+    
Sbjct: 163 FHPRVNDYKIVRMLRTNKDALAVEVYSLRTNSWKMIEAIPPWLKCTWQNHKGTFFNGVAY 222

Query: 242 GVLYWATLSCLFTFDLNTEVFVVNHFPDNVYDS 144
            ++    +  + +FD  +E F     PD +  S
Sbjct: 223 HIIQKGPIFSIMSFDSGSEEFEEFIAPDAISSS 255



 Score = 45.1 bits (105), Expect(3) = 2e-15
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = -1

Query: 832 LDILSRLPIKSLLRFMIVSKRWYSLISYPSFIQLHLNLATKNPQNDDSYIIHRTTTSKIT 653
           +DIL RLP KSL+RF+   K W  LI  PSF+  HL        +     +H     ++ 
Sbjct: 12  IDILVRLPAKSLVRFLCTCKSWSDLIGSPSFVSTHLYRNVTKHAHVYLLCLHHPDFERLV 71

Query: 652 YPSLPH 635
            P  P+
Sbjct: 72  NPDDPY 77



 Score = 33.9 bits (76), Expect(3) = 2e-15
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = -2

Query: 645 LFHINSPQNCLDLELPYCKGDFPLLPNFFLVGCCNGIVCVTISGLYEDQLTYLWNPATKH 466
           LF   + + C  L  P    ++     + + G  NG+VC++   L  D   ++WNP+ + 
Sbjct: 86  LFSSETFEECYKLSHPLGNTEY-----YGIYGSSNGLVCISDEILNFDSPIHIWNPSVRK 140

Query: 465 SKLLPPS 445
            + LP S
Sbjct: 141 FRALPMS 147


>gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifolia subsp. inflata]
          Length = 394

 Score = 48.9 bits (115), Expect(3) = 3e-15
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -1

Query: 826 ILSRLPIKSLLRFMIVSKRWYSLISYPSFIQLHLNLAT 713
           ILSR P+K+LLRF  +SK W +LI   +FI +HLN AT
Sbjct: 18  ILSRFPVKALLRFKFISKTWSTLIESSTFINIHLNRAT 55



 Score = 41.6 bits (96), Expect(3) = 3e-15
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
 Frame = -3

Query: 404 FHPIGNDYKFVRVVEVRKNSKGA--------EVYSANKNSWREIEGAPLNLPC---YSIF 258
           F  I  DYK V + EV K+S+          EVY    +SWR++      LP    Y  F
Sbjct: 165 FDSIVKDYKLVAISEVFKDSEWGTDEKEQKVEVYDMRIDSWRDLNHVDQQLPTVYYYPCF 224

Query: 257 DVGLKGVLYWATLS-----CLFTFDLNTEVF 180
           +    G  +W  ++      + +FD++TE+F
Sbjct: 225 ERLYNGAFHWYAINDRFDHVILSFDISTEIF 255



 Score = 37.7 bits (86), Expect(3) = 3e-15
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -2

Query: 612 DLELPYCKGDFPLLPNFFLVGCCNGIVCVTISGLYEDQLTYLWNPATKHSKLLPPS 445
           DL+LPY       L N  LVG CNG++ +T     + ++  L+NPATK   L+PPS
Sbjct: 96  DLDLPYLTFTQRYLFNK-LVGPCNGLIVLT-----DFEIIVLFNPATKIYMLIPPS 145


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