BLASTX nr result

ID: Panax21_contig00022859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022859
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera]   109   2e-28
ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067...    91   9e-24
ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|22...    89   3e-23
ref|XP_002298169.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-23
ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812...    97   4e-23

>emb|CAN83928.1| hypothetical protein VITISV_036910 [Vitis vinifera]
          Length = 673

 Score =  109 bits (272), Expect(2) = 2e-28
 Identities = 54/94 (57%), Positives = 63/94 (67%)
 Frame = +3

Query: 3   PDFHITSSTILASTLHITRVNNRNPGPTNIDLAPGSGLRGGPDVSMTTSGATALSEQHQR 182
           PDFHITSSTILASTLHITR+N RNPGP N ++ PG GLR GPD +M  +GA      +Q 
Sbjct: 530 PDFHITSSTILASTLHITRLNTRNPGPVNTEVMPGPGLRPGPDPAMPANGAAGAPGLYQE 589

Query: 183 PDNQNSDGLDHSPQIEGQPALRQEENGANPGAMN 284
               ++     + QI GQP LRQ E GANPG MN
Sbjct: 590 GSENDNLSRGGNLQIPGQPELRQAETGANPGTMN 623



 Score = 42.4 bits (98), Expect(2) = 2e-28
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = +2

Query: 356 GAYSESFNSILSMFRDGRVQGHVFPESPRPENPTAQ 463
           GA SE  NS LS+FRD R QG V+ ESP+ EN   Q
Sbjct: 635 GASSEGLNSFLSIFRDVRDQGQVYAESPQRENRATQ 670


>ref|XP_003593019.1| Membralin [Medicago truncatula] gi|355482067|gb|AES63270.1|
           Membralin [Medicago truncatula]
          Length = 675

 Score = 90.5 bits (223), Expect(2) = 9e-24
 Identities = 49/94 (52%), Positives = 59/94 (62%)
 Frame = +3

Query: 3   PDFHITSSTILASTLHITRVNNRNPGPTNIDLAPGSGLRGGPDVSMTTSGATALSEQHQR 182
           PDFHITSSTILASTLHITR+N RNPG +  +L  G+G R G D  M  +G    + Q + 
Sbjct: 531 PDFHITSSTILASTLHITRLNTRNPGLSATNLPSGTGFRPGFDQPMPQNGPGVTAPQGR- 589

Query: 183 PDNQNSDGLDHSPQIEGQPALRQEENGANPGAMN 284
               N DG+ +  QI GQ   RQ E G NPG+MN
Sbjct: 590 -SESNPDGVANPTQIPGQADTRQAERGPNPGSMN 622



 Score = 45.8 bits (107), Expect(2) = 9e-24
 Identities = 22/39 (56%), Positives = 27/39 (69%)
 Frame = +2

Query: 356 GAYSESFNSILSMFRDGRVQGHVFPESPRPENPTAQGAE 472
           GA SES NS  SMFRD R QG V+ E+PR +NP  Q ++
Sbjct: 634 GASSESLNSFFSMFRDVRDQGQVYTEAPRHDNPQNQESD 672


>ref|XP_002529547.1| Membralin, putative [Ricinus communis] gi|223530995|gb|EEF32850.1|
           Membralin, putative [Ricinus communis]
          Length = 672

 Score = 89.4 bits (220), Expect(2) = 3e-23
 Identities = 48/94 (51%), Positives = 58/94 (61%)
 Frame = +3

Query: 3   PDFHITSSTILASTLHITRVNNRNPGPTNIDLAPGSGLRGGPDVSMTTSGATALSEQHQR 182
           PDFHITSSTILAST+HITR+N RN GP N D A G   R G D +M  +G      Q Q+
Sbjct: 530 PDFHITSSTILASTVHITRLNTRNEGPVNTDAASGLAFRPGSDQAMPANGIEPPGPQ-QQ 588

Query: 183 PDNQNSDGLDHSPQIEGQPALRQEENGANPGAMN 284
             N N   + +  QI G+  LRQ E G +PG+MN
Sbjct: 589 LGNDNLGRVSNPMQIPGEADLRQTETGPSPGSMN 622



 Score = 45.4 bits (106), Expect(2) = 3e-23
 Identities = 23/36 (63%), Positives = 23/36 (63%)
 Frame = +2

Query: 356 GAYSESFNSILSMFRDGRVQGHVFPESPRPENPTAQ 463
           GA SE  NS  SMFRD R QG  F ESPRPEN   Q
Sbjct: 634 GASSEGLNSFFSMFRDVRDQGQGFDESPRPENAADQ 669


>ref|XP_002298169.1| predicted protein [Populus trichocarpa] gi|222845427|gb|EEE82974.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 88.6 bits (218), Expect(2) = 3e-23
 Identities = 47/94 (50%), Positives = 60/94 (63%)
 Frame = +3

Query: 3   PDFHITSSTILASTLHITRVNNRNPGPTNIDLAPGSGLRGGPDVSMTTSGATALSEQHQR 182
           PDFHITSSTILAST+HITR+N RNPG  N D+A G  LR GPD ++  +G  A   + Q 
Sbjct: 527 PDFHITSSTILASTVHITRLNTRNPGSVNADMASGPALRPGPDQAIPANGIGAPGLE-QP 585

Query: 183 PDNQNSDGLDHSPQIEGQPALRQEENGANPGAMN 284
            +N   + +D+  Q  GQ  L+Q E   N G+MN
Sbjct: 586 SENDIRERVDNPMQNPGQADLQQSETNPNSGSMN 619



 Score = 46.2 bits (108), Expect(2) = 3e-23
 Identities = 22/31 (70%), Positives = 24/31 (77%)
 Frame = +2

Query: 356 GAYSESFNSILSMFRDGRVQGHVFPESPRPE 448
           GA SE FNS LS+FRD R QG V+ ESPRPE
Sbjct: 631 GASSEGFNSFLSIFRDVRDQGQVYAESPRPE 661


>ref|XP_003547536.1| PREDICTED: uncharacterized protein LOC100812436 [Glycine max]
          Length = 680

 Score = 96.7 bits (239), Expect(2) = 4e-23
 Identities = 52/94 (55%), Positives = 65/94 (69%)
 Frame = +3

Query: 3   PDFHITSSTILASTLHITRVNNRNPGPTNIDLAPGSGLRGGPDVSMTTSGATALSEQHQR 182
           PDFHITSSTILASTLHITR+N RN G  N+DLA G+GLR G D SM  +G   +++   R
Sbjct: 531 PDFHITSSTILASTLHITRLNTRNQGLNNVDLATGAGLRPGFDQSMPQNG-PGVADPQDR 589

Query: 183 PDNQNSDGLDHSPQIEGQPALRQEENGANPGAMN 284
            +N N D + +  QI GQ  ++Q E G NPG+MN
Sbjct: 590 SEN-NRDRVANPAQIPGQADIQQAERGPNPGSMN 622



 Score = 37.4 bits (85), Expect(2) = 4e-23
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = +2

Query: 356 GAYSESFNSILSMFRDGRVQGHVFPESP 439
           GA SE  NS  SMFRD R QG VF E+P
Sbjct: 634 GASSEGLNSFFSMFRDVREQGQVFNETP 661


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