BLASTX nr result
ID: Panax21_contig00022783
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022783 (863 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2... 159 8e-37 ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|2... 158 2e-36 ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like... 156 7e-36 emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera] 156 7e-36 ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like... 154 2e-35 >ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1| predicted protein [Populus trichocarpa] Length = 509 Score = 159 bits (402), Expect = 8e-37 Identities = 79/114 (69%), Positives = 93/114 (81%) Frame = +3 Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440 +QN+P +N+DRLF SHRVR++ID I TT KLVE+YEDKD+AR+DEIAALGGQTA GTNV Sbjct: 27 LQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVEVYEDKDNARRDEIAALGGQTAMGTNV 86 Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602 FSAFYDRLKE IREYHRRHPAARVVDA ++YE +LK+EP I F+G Sbjct: 87 FSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAMLKEEPVIEFTG 130 Score = 63.5 bits (153), Expect = 6e-08 Identities = 27/46 (58%), Positives = 36/46 (78%) Frame = +1 Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861 N KF +P EYSTYL++FSQ N + KLK +R+YREY+ +LEYL+Y Sbjct: 149 NLKFEKPIEYSTYLDIFSQPNIVPHKLKFSRRYREYMENLLEYLVY 194 >ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|222869008|gb|EEF06139.1| predicted protein [Populus trichocarpa] Length = 495 Score = 158 bits (399), Expect = 2e-36 Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 8/130 (6%) Frame = +3 Query: 237 ANHRDGHRV--------QNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARK 392 A+H + R+ QN+P +N+DRLF SHRVR++I+ I TT KLVE+YED+D+ARK Sbjct: 6 ASHEEAERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIIATTEKLVEVYEDRDNARK 65 Query: 393 DEIAALGGQTAAGTNVFSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLL 572 DEIAALGGQTA GTNVFSAFYDRLKE IREYHRRHPAARVVDA ++YE +L Sbjct: 66 DEIAALGGQTATGTNVFSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAML 115 Query: 573 KDEPHIVFSG 602 K+EP I F+G Sbjct: 116 KEEPVIEFTG 125 Score = 65.1 bits (157), Expect = 2e-08 Identities = 28/46 (60%), Positives = 36/46 (78%) Frame = +1 Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861 N KF +P EYSTYL++FSQ + + RK+K TRQYREY+ +LEYL Y Sbjct: 144 NLKFEKPIEYSTYLDIFSQPHNLPRKVKFTRQYREYMENLLEYLFY 189 >ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like [Vitis vinifera] gi|302144037|emb|CBI23142.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 156 bits (394), Expect = 7e-36 Identities = 90/171 (52%), Positives = 105/171 (61%) Frame = +3 Query: 90 MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269 MSSTLLE+TRAGH +QN Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29 Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449 +P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA Sbjct: 30 EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89 Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602 FYDRLKE IREYHR+H AARVVDA +EYE+LLK+E I F G Sbjct: 90 FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130 Score = 73.2 bits (178), Expect = 7e-11 Identities = 35/46 (76%), Positives = 38/46 (82%) Frame = +1 Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861 NSKFGE EYS Y+EVFS+ KI RKLKLTRQYREYL +LEYLIY Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194 >emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera] Length = 244 Score = 156 bits (394), Expect = 7e-36 Identities = 90/171 (52%), Positives = 105/171 (61%) Frame = +3 Query: 90 MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269 MSSTLLE+TRAGH +QN Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29 Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449 +P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA Sbjct: 30 EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89 Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602 FYDRLKE IREYHR+H AARVVDA +EYE+LLK+E I F G Sbjct: 90 FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130 Score = 73.2 bits (178), Expect = 7e-11 Identities = 35/46 (76%), Positives = 38/46 (82%) Frame = +1 Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861 NSKFGE EYS Y+EVFS+ KI RKLKLTRQYREYL +LEYLIY Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194 >ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max] Length = 509 Score = 154 bits (390), Expect = 2e-35 Identities = 76/114 (66%), Positives = 89/114 (78%) Frame = +3 Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440 +QNDP SN++RL+ SHRVR++ID I+ TT KL+ +YED D+ARKDEIAALGGQTA G NV Sbjct: 27 LQNDPASNKERLYQSHRVRNMIDTITSTTEKLIGVYEDNDNARKDEIAALGGQTATGINV 86 Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602 FSAFYDRLKE IREYHR+HP ARVVDA D+YE LL +EP I FSG Sbjct: 87 FSAFYDRLKE----------IREYHRKHPVARVVDANDDYETLLNEEPQIEFSG 130 Score = 77.0 bits (188), Expect = 5e-12 Identities = 34/46 (73%), Positives = 40/46 (86%) Frame = +1 Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861 NSKFGEP EYS YL+VFS T+KI RK+K+TRQYREYL +LEYL+Y Sbjct: 149 NSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQYREYLANLLEYLLY 194