BLASTX nr result
ID: Panax21_contig00022783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022783
(863 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2... 159 8e-37
ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|2... 158 2e-36
ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like... 156 7e-36
emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera] 156 7e-36
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like... 154 2e-35
>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
predicted protein [Populus trichocarpa]
Length = 509
Score = 159 bits (402), Expect = 8e-37
Identities = 79/114 (69%), Positives = 93/114 (81%)
Frame = +3
Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440
+QN+P +N+DRLF SHRVR++ID I TT KLVE+YEDKD+AR+DEIAALGGQTA GTNV
Sbjct: 27 LQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVEVYEDKDNARRDEIAALGGQTAMGTNV 86
Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
FSAFYDRLKE IREYHRRHPAARVVDA ++YE +LK+EP I F+G
Sbjct: 87 FSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAMLKEEPVIEFTG 130
Score = 63.5 bits (153), Expect = 6e-08
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +1
Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
N KF +P EYSTYL++FSQ N + KLK +R+YREY+ +LEYL+Y
Sbjct: 149 NLKFEKPIEYSTYLDIFSQPNIVPHKLKFSRRYREYMENLLEYLVY 194
>ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|222869008|gb|EEF06139.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 158 bits (399), Expect = 2e-36
Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 8/130 (6%)
Frame = +3
Query: 237 ANHRDGHRV--------QNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARK 392
A+H + R+ QN+P +N+DRLF SHRVR++I+ I TT KLVE+YED+D+ARK
Sbjct: 6 ASHEEAERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIIATTEKLVEVYEDRDNARK 65
Query: 393 DEIAALGGQTAAGTNVFSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLL 572
DEIAALGGQTA GTNVFSAFYDRLKE IREYHRRHPAARVVDA ++YE +L
Sbjct: 66 DEIAALGGQTATGTNVFSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAML 115
Query: 573 KDEPHIVFSG 602
K+EP I F+G
Sbjct: 116 KEEPVIEFTG 125
Score = 65.1 bits (157), Expect = 2e-08
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
N KF +P EYSTYL++FSQ + + RK+K TRQYREY+ +LEYL Y
Sbjct: 144 NLKFEKPIEYSTYLDIFSQPHNLPRKVKFTRQYREYMENLLEYLFY 189
>ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like [Vitis vinifera]
gi|302144037|emb|CBI23142.3| unnamed protein product
[Vitis vinifera]
Length = 509
Score = 156 bits (394), Expect = 7e-36
Identities = 90/171 (52%), Positives = 105/171 (61%)
Frame = +3
Query: 90 MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269
MSSTLLE+TRAGH +QN
Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29
Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449
+P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA
Sbjct: 30 EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89
Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
FYDRLKE IREYHR+H AARVVDA +EYE+LLK+E I F G
Sbjct: 90 FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130
Score = 73.2 bits (178), Expect = 7e-11
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
NSKFGE EYS Y+EVFS+ KI RKLKLTRQYREYL +LEYLIY
Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194
>emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera]
Length = 244
Score = 156 bits (394), Expect = 7e-36
Identities = 90/171 (52%), Positives = 105/171 (61%)
Frame = +3
Query: 90 MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269
MSSTLLE+TRAGH +QN
Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29
Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449
+P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA
Sbjct: 30 EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89
Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
FYDRLKE IREYHR+H AARVVDA +EYE+LLK+E I F G
Sbjct: 90 FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130
Score = 73.2 bits (178), Expect = 7e-11
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
NSKFGE EYS Y+EVFS+ KI RKLKLTRQYREYL +LEYLIY
Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194
>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 154 bits (390), Expect = 2e-35
Identities = 76/114 (66%), Positives = 89/114 (78%)
Frame = +3
Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440
+QNDP SN++RL+ SHRVR++ID I+ TT KL+ +YED D+ARKDEIAALGGQTA G NV
Sbjct: 27 LQNDPASNKERLYQSHRVRNMIDTITSTTEKLIGVYEDNDNARKDEIAALGGQTATGINV 86
Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
FSAFYDRLKE IREYHR+HP ARVVDA D+YE LL +EP I FSG
Sbjct: 87 FSAFYDRLKE----------IREYHRKHPVARVVDANDDYETLLNEEPQIEFSG 130
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +1
Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
NSKFGEP EYS YL+VFS T+KI RK+K+TRQYREYL +LEYL+Y
Sbjct: 149 NSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQYREYLANLLEYLLY 194