BLASTX nr result

ID: Panax21_contig00022783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022783
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2...   159   8e-37
ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like...   156   7e-36
emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera]   156   7e-36
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like...   154   2e-35

>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  159 bits (402), Expect = 8e-37
 Identities = 79/114 (69%), Positives = 93/114 (81%)
 Frame = +3

Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440
           +QN+P +N+DRLF SHRVR++ID I  TT KLVE+YEDKD+AR+DEIAALGGQTA GTNV
Sbjct: 27  LQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVEVYEDKDNARRDEIAALGGQTAMGTNV 86

Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
           FSAFYDRLKE          IREYHRRHPAARVVDA ++YE +LK+EP I F+G
Sbjct: 87  FSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAMLKEEPVIEFTG 130



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +1

Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
           N KF +P EYSTYL++FSQ N +  KLK +R+YREY+  +LEYL+Y
Sbjct: 149 NLKFEKPIEYSTYLDIFSQPNIVPHKLKFSRRYREYMENLLEYLVY 194


>ref|XP_002322012.1| predicted protein [Populus trichocarpa] gi|222869008|gb|EEF06139.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  158 bits (399), Expect = 2e-36
 Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 8/130 (6%)
 Frame = +3

Query: 237 ANHRDGHRV--------QNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARK 392
           A+H +  R+        QN+P +N+DRLF SHRVR++I+ I  TT KLVE+YED+D+ARK
Sbjct: 6   ASHEEAERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIIATTEKLVEVYEDRDNARK 65

Query: 393 DEIAALGGQTAAGTNVFSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLL 572
           DEIAALGGQTA GTNVFSAFYDRLKE          IREYHRRHPAARVVDA ++YE +L
Sbjct: 66  DEIAALGGQTATGTNVFSAFYDRLKE----------IREYHRRHPAARVVDANEDYEAML 115

Query: 573 KDEPHIVFSG 602
           K+EP I F+G
Sbjct: 116 KEEPVIEFTG 125



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
           N KF +P EYSTYL++FSQ + + RK+K TRQYREY+  +LEYL Y
Sbjct: 144 NLKFEKPIEYSTYLDIFSQPHNLPRKVKFTRQYREYMENLLEYLFY 189


>ref|XP_002268036.2| PREDICTED: splicing factor 3A subunit 3-like [Vitis vinifera]
           gi|302144037|emb|CBI23142.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score =  156 bits (394), Expect = 7e-36
 Identities = 90/171 (52%), Positives = 105/171 (61%)
 Frame = +3

Query: 90  MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269
           MSSTLLE+TRAGH                                            +QN
Sbjct: 1   MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29

Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449
           +P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA
Sbjct: 30  EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89

Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
           FYDRLKE          IREYHR+H AARVVDA +EYE+LLK+E  I F G
Sbjct: 90  FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +1

Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
           NSKFGE  EYS Y+EVFS+  KI RKLKLTRQYREYL  +LEYLIY
Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194


>emb|CAN69292.1| hypothetical protein VITISV_028881 [Vitis vinifera]
          Length = 244

 Score =  156 bits (394), Expect = 7e-36
 Identities = 90/171 (52%), Positives = 105/171 (61%)
 Frame = +3

Query: 90  MSSTLLELTRAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGANHRDGHRVQN 269
           MSSTLLE+TRAGH                                            +QN
Sbjct: 1   MSSTLLEVTRAGHEEIERLERLIVKD-------------------------------LQN 29

Query: 270 DPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNVFSA 449
           +P S++DRLF SHRVR++ID I+ TT KL++IYEDKD+ARKDEIAALGGQTA GTNVFSA
Sbjct: 30  EPASSKDRLFQSHRVRNMIDTITITTEKLIDIYEDKDNARKDEIAALGGQTATGTNVFSA 89

Query: 450 FYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
           FYDRLKE          IREYHR+H AARVVDA +EYE+LLK+E  I F G
Sbjct: 90  FYDRLKE----------IREYHRKHQAARVVDANEEYEELLKEELRIEFRG 130



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = +1

Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
           NSKFGE  EYS Y+EVFS+  KI RKLKLTRQYREYL  +LEYLIY
Sbjct: 149 NSKFGEHIEYSAYVEVFSEPQKIPRKLKLTRQYREYLENLLEYLIY 194


>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  154 bits (390), Expect = 2e-35
 Identities = 76/114 (66%), Positives = 89/114 (78%)
 Frame = +3

Query: 261 VQNDPYSNRDRLFHSHRVRSLIDQISDTTHKLVEIYEDKDSARKDEIAALGGQTAAGTNV 440
           +QNDP SN++RL+ SHRVR++ID I+ TT KL+ +YED D+ARKDEIAALGGQTA G NV
Sbjct: 27  LQNDPASNKERLYQSHRVRNMIDTITSTTEKLIGVYEDNDNARKDEIAALGGQTATGINV 86

Query: 441 FSAFYDRLKETNHIRAKTNHIREYHRRHPAARVVDATDEYEQLLKDEPHIVFSG 602
           FSAFYDRLKE          IREYHR+HP ARVVDA D+YE LL +EP I FSG
Sbjct: 87  FSAFYDRLKE----------IREYHRKHPVARVVDANDDYETLLNEEPQIEFSG 130



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +1

Query: 724 NSKFGEPTEYSTYLEVFSQTNKISRKLKLTRQYREYLGKILEYLIY 861
           NSKFGEP EYS YL+VFS T+KI RK+K+TRQYREYL  +LEYL+Y
Sbjct: 149 NSKFGEPIEYSAYLDVFSDTDKIPRKMKMTRQYREYLANLLEYLLY 194


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