BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022723
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             301   e-108
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   290   2e-98
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             271   3e-98
emb|CAE05579.3| OSJNBa0032N05.7 [Oryza sativa Japonica Group]         271   8e-98
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     278   4e-97

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  301 bits (770), Expect(2) = e-108
 Identities = 141/263 (53%), Positives = 191/263 (72%)
 Frame = +1

Query: 94   KTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVPGVSRKIAEHRLEVDPSKKLVR*KR 273
            + V +G+ +   +R+ LI LL   +  FAW  +D+ G+   I  H L VDP+ K V+ KR
Sbjct: 770  RCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKR 829

Query: 274  RIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANVVLVQKQNGKWRVCIDYTDLNKACP 453
            R   PER R ++EE+ KLL    I E+ YP+W+AN V+V+K+NGKWRVC+DYTDLNKACP
Sbjct: 830  RKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACP 889

Query: 454  KDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISMCKEDIPKTAFITHRSVYAYKKMTF 633
            KD YPLPHID+L++ATSG  LLSFMDAFSGY+QI M K+D  KT+F+T R  Y YK M+F
Sbjct: 890  KDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSF 949

Query: 634  GLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKSMVVQKHLDDLEECFQTVRHHNLRL 813
            GL NAGATYQR +N +   ++GR +EVY+DDM+VKS+  + H++ L +CF  +  + ++L
Sbjct: 950  GLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKL 1009

Query: 814  NSTKCTFGLRVG*FLGYLVSQRG 882
            N TKCTFG+  G FLGY+V++RG
Sbjct: 1010 NPTKCTFGVTSGEFLGYVVTKRG 1032



 Score =  119 bits (299), Expect(2) = e-108
 Identities = 64/139 (46%), Positives = 89/139 (64%)
 Frame = +2

Query: 875  RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054
            RG+EANP++I+AIL + +P++ ++VQRLTGRIAAL RF+SRS ++CLPF++ L   K+  
Sbjct: 1031 RGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLL---KRRA 1087

Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234
             F W  D E+AF+ +K YLS+ P+LVK                 V + LV E  G    +
Sbjct: 1088 QFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPI 1147

Query: 1235 YYVSHVLRDAETRYPNIEK 1291
            +Y S  L +AETRYP IEK
Sbjct: 1148 FYTSKSLVEAETRYPVIEK 1166


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  290 bits (742), Expect(2) = 2e-98
 Identities = 138/277 (49%), Positives = 190/277 (68%)
 Frame = +1

Query: 52   GETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVPGVSRKIAEHR 231
            G   +  +     ++ V I   LP  L+  L+  L   A  FAW  +D+PG+   +  H 
Sbjct: 714  GTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHE 773

Query: 232  LEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANVVLVQKQNGKW 411
            L VDP+ K ++ KRR   P+R + ++EE+ KLL    I E+ YP W+ N V+V+K+NGKW
Sbjct: 774  LNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGKW 833

Query: 412  RVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISMCKEDIPKTAF 591
            RVCID+TDLNKACPKD +PLPHID+L++AT+G  LLSFMDAFSGY+QI M + D  KT F
Sbjct: 834  RVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVF 893

Query: 592  ITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKSMVVQKHLDDL 771
            IT +  Y YK M FGL NAGATY R++N +F  +L  +MEVY+DDM+VKS+  ++H+  L
Sbjct: 894  ITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHL 953

Query: 772  EECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882
             +CFQ +  +N++LN +KCTFG+  G FLGYLV++RG
Sbjct: 954  RQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRG 990



 Score = 97.1 bits (240), Expect(2) = 2e-98
 Identities = 56/139 (40%), Positives = 79/139 (56%)
 Frame = +2

Query: 875  RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054
            RG+EANP++I AI+++ +P++ ++VQRL GRIAAL RF+SRS ++CLPF+  L+  K+  
Sbjct: 989  RGIEANPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKR-- 1046

Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234
             F+W   CE   +G  +YL  A                      V   LV E  G  H +
Sbjct: 1047 -FEWDEKCE---EGETLYLYIA-----------------VSTSAVSGVLVREDRGEQHPI 1085

Query: 1235 YYVSHVLRDAETRYPNIEK 1291
            +YVS  L  AE RYP +EK
Sbjct: 1086 FYVSKTLDGAELRYPTLEK 1104


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  271 bits (693), Expect(2) = 3e-98
 Identities = 128/229 (55%), Positives = 173/229 (75%)
 Frame = +1

Query: 196 VPGVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMA 375
           +PG++  I  H L VDPS K V+ KRR    ER +I+++E+ KLL +  I E+ YP+W+A
Sbjct: 1   MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKIVNDEVDKLLKIGSIREVQYPEWVA 60

Query: 376 NVVLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQI 555
           N V+V+K+NGK RVCID+TDLNKACPKD +PLPHID+L+++T+G  LL+FMDAFSG +QI
Sbjct: 61  NTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFSGSNQI 120

Query: 556 SMCKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIV 735
            M  ED  KT+FIT R +Y YK M FGL NAGATYQR++N +F + LG+ MEVY+DDM+V
Sbjct: 121 MMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLV 180

Query: 736 KSMVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882
           KS+  + H+  LEECF  +  + ++LN  KCTFG+  G FLGY+V++RG
Sbjct: 181 KSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERG 229



 Score =  115 bits (288), Expect(2) = 3e-98
 Identities = 64/139 (46%), Positives = 82/139 (58%)
 Frame = +2

Query: 875  RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054
            RG+EAN  +I A LNM +P++FK+VQRLTGRIAAL RF+SRS ++ LPF+  LKG    K
Sbjct: 228  RGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTDKSLPFYQILKG---NK 284

Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234
             F W   CE+AF  +K YL++ P+L K                 V   LV E  G    +
Sbjct: 285  GFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVREDRGEQKPI 344

Query: 1235 YYVSHVLRDAETRYPNIEK 1291
            YYVS  + D ETRY  +EK
Sbjct: 345  YYVSKSMTDPETRYTMMEK 363


>emb|CAE05579.3| OSJNBa0032N05.7 [Oryza sativa Japonica Group]
          Length = 1154

 Score =  271 bits (693), Expect(2) = 8e-98
 Identities = 136/294 (46%), Positives = 186/294 (63%)
 Frame = +1

Query: 1    EIEPFTESSSKPLVMPAGETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFA 180
            E EP   +   P   P G+    ++      + V +G  + E    N++E+L    D+FA
Sbjct: 438  EAEPHDRAKHMPKPAPHGKVIRVQVDDADPTRFVSLGGDMGEREAENILEVLKKNIDIFA 497

Query: 181  WEPKDVPGVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDY 360
            W P +V GVS  +  H L V P  K  + K R  + +RQ     E+ KLL    I EID+
Sbjct: 498  WGPDEVGGVSADLIMHYLAVKPDAKPRKQKLRKMSVDRQEAAKAEVQKLLKTGVIQEIDH 557

Query: 361  PQWMANVVLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFS 540
            P+W+AN VLV+K NGKWR+C+D+TDLNKACPKD +PLP IDQL+D+T+G  L+SF+DA+S
Sbjct: 558  PEWLANPVLVRKSNGKWRMCVDFTDLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYS 617

Query: 541  GYHQISMCKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYV 720
            GYHQI M    IPKTAFIT    + + +M FGL NAGAT+ R++  +   +LGRN+E YV
Sbjct: 618  GYHQIHMNPAHIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGRNVEAYV 677

Query: 721  DDMIVKSMVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882
            DD++VKS     H+ DL+E F  +R   ++LN  KC FG+R G  LG+LVS+RG
Sbjct: 678  DDIVVKSRKAFDHVSDLQETFDNLRVAGMKLNPEKCVFGVRAGKLLGFLVSERG 731



 Score =  114 bits (284), Expect(2) = 8e-98
 Identities = 64/140 (45%), Positives = 81/140 (57%)
 Frame = +2

Query: 875  RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054
            RG+EANPEKI AI  MK P S ++VQ+L G+IAAL RF+S++AER LPFF TL+G  K  
Sbjct: 730  RGIEANPEKIDAIQQMKPPSSVREVQKLAGQIAALSRFLSKAAERGLPFFKTLRGAGK-- 787

Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234
             F WT +C+ AF  +K Y  S P LV                  V A LV E       V
Sbjct: 788  -FSWTPECQAAFDEVKQYPQSPPTLVSPALGSELLLYLAASPVAVSAALVQETESGQKPV 846

Query: 1235 YYVSHVLRDAETRYPNIEKF 1294
            Y++S  L+ A+ RY  +EKF
Sbjct: 847  YFISEALQGAKLRYIEMEKF 866


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  278 bits (710), Expect(2) = 4e-97
 Identities = 139/287 (48%), Positives = 194/287 (67%)
 Frame = +1

Query: 22   SSSKPLVMPAGETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVP 201
            S++   ++   ET++ ++  G+   TV +G GL    R +L++LL    DVFA+   ++P
Sbjct: 235  STNNVSMVEGAETEQVEIDPGR---TVTVGVGLEPKFRADLLDLLRKNKDVFAYSAAEMP 291

Query: 202  GVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANV 381
            GVSR++  H+L V  + + V+ K R  + E+   I  E+ KLL   FI    YP+W+ANV
Sbjct: 292  GVSREVIVHKLNVLSNARPVKQKMRNSSAEKDDAIKAEVDKLLEAGFIMPCTYPEWLANV 351

Query: 382  VLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISM 561
            V+V+K +G WR+C+D+T+LNKACPKD YPLP ID LIDAT+ Y +LS +DAFSGYHQ+ M
Sbjct: 352  VMVKKSSGGWRMCVDFTNLNKACPKDCYPLPRIDSLIDATASYTMLSLLDAFSGYHQVFM 411

Query: 562  CKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKS 741
             +ED+ K AFIT    Y YK M+FGL NAGATY R+++ +F+ + GRN+E YVDD IVKS
Sbjct: 412  AEEDVLKCAFITIHGTYMYKMMSFGLKNAGATYTRLVDKVFQDQKGRNIEAYVDDAIVKS 471

Query: 742  MVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882
                +HL DL E F ++R + ++LN  KC FG+R G FLG LVS RG
Sbjct: 472  KSDSEHLADLSETFCSLRKYKMKLNPMKCNFGVRAGKFLGVLVSARG 518



 Score =  105 bits (261), Expect(2) = 4e-97
 Identities = 58/144 (40%), Positives = 82/144 (56%)
 Frame = +2

Query: 860  VIWLVRGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKG 1039
            V+   RG++ANPEK+QAIL++  P++ K+V  LTGR+AAL RF+SRS ++  PFF  LKG
Sbjct: 512  VLVSARGIDANPEKVQAILDLLEPRNRKEVMMLTGRMAALARFISRSTDKSTPFFKVLKG 571

Query: 1040 PKKEKTFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGG 1219
                K F W  +   AF+ +K +L + P L +                 V A ++ E   
Sbjct: 572  ---NKDFSWGEEQSTAFRQLKAHLITLPTLSRPMLGETLYLYIAVTSATVSAVIIREEDK 628

Query: 1220 N*HQVYYVSHVLRDAETRYPNIEK 1291
              H +Y++SH L  AET YP IEK
Sbjct: 629  QQHPIYFISHTLLAAETNYPLIEK 652