BLASTX nr result
ID: Panax21_contig00022723
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022723 (1294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 301 e-108 gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 290 2e-98 gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 271 3e-98 emb|CAE05579.3| OSJNBa0032N05.7 [Oryza sativa Japonica Group] 271 8e-98 gb|AAY99339.1| pol-polyprotein [Silene latifolia] 278 4e-97 >gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] Length = 1838 Score = 301 bits (770), Expect(2) = e-108 Identities = 141/263 (53%), Positives = 191/263 (72%) Frame = +1 Query: 94 KTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVPGVSRKIAEHRLEVDPSKKLVR*KR 273 + V +G+ + +R+ LI LL + FAW +D+ G+ I H L VDP+ K V+ KR Sbjct: 770 RCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKR 829 Query: 274 RIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANVVLVQKQNGKWRVCIDYTDLNKACP 453 R PER R ++EE+ KLL I E+ YP+W+AN V+V+K+NGKWRVC+DYTDLNKACP Sbjct: 830 RKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACP 889 Query: 454 KDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISMCKEDIPKTAFITHRSVYAYKKMTF 633 KD YPLPHID+L++ATSG LLSFMDAFSGY+QI M K+D KT+F+T R Y YK M+F Sbjct: 890 KDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSF 949 Query: 634 GLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKSMVVQKHLDDLEECFQTVRHHNLRL 813 GL NAGATYQR +N + ++GR +EVY+DDM+VKS+ + H++ L +CF + + ++L Sbjct: 950 GLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKL 1009 Query: 814 NSTKCTFGLRVG*FLGYLVSQRG 882 N TKCTFG+ G FLGY+V++RG Sbjct: 1010 NPTKCTFGVTSGEFLGYVVTKRG 1032 Score = 119 bits (299), Expect(2) = e-108 Identities = 64/139 (46%), Positives = 89/139 (64%) Frame = +2 Query: 875 RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054 RG+EANP++I+AIL + +P++ ++VQRLTGRIAAL RF+SRS ++CLPF++ L K+ Sbjct: 1031 RGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLL---KRRA 1087 Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234 F W D E+AF+ +K YLS+ P+LVK V + LV E G + Sbjct: 1088 QFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPI 1147 Query: 1235 YYVSHVLRDAETRYPNIEK 1291 +Y S L +AETRYP IEK Sbjct: 1148 FYTSKSLVEAETRYPVIEK 1166 >gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1787 Score = 290 bits (742), Expect(2) = 2e-98 Identities = 138/277 (49%), Positives = 190/277 (68%) Frame = +1 Query: 52 GETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVPGVSRKIAEHR 231 G + + ++ V I LP L+ L+ L A FAW +D+PG+ + H Sbjct: 714 GTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHE 773 Query: 232 LEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANVVLVQKQNGKW 411 L VDP+ K ++ KRR P+R + ++EE+ KLL I E+ YP W+ N V+V+K+NGKW Sbjct: 774 LNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGKW 833 Query: 412 RVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISMCKEDIPKTAF 591 RVCID+TDLNKACPKD +PLPHID+L++AT+G LLSFMDAFSGY+QI M + D KT F Sbjct: 834 RVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVF 893 Query: 592 ITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKSMVVQKHLDDL 771 IT + Y YK M FGL NAGATY R++N +F +L +MEVY+DDM+VKS+ ++H+ L Sbjct: 894 ITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHL 953 Query: 772 EECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882 +CFQ + +N++LN +KCTFG+ G FLGYLV++RG Sbjct: 954 RQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRG 990 Score = 97.1 bits (240), Expect(2) = 2e-98 Identities = 56/139 (40%), Positives = 79/139 (56%) Frame = +2 Query: 875 RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054 RG+EANP++I AI+++ +P++ ++VQRL GRIAAL RF+SRS ++CLPF+ L+ K+ Sbjct: 989 RGIEANPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKR-- 1046 Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234 F+W CE +G +YL A V LV E G H + Sbjct: 1047 -FEWDEKCE---EGETLYLYIA-----------------VSTSAVSGVLVREDRGEQHPI 1085 Query: 1235 YYVSHVLRDAETRYPNIEK 1291 +YVS L AE RYP +EK Sbjct: 1086 FYVSKTLDGAELRYPTLEK 1104 >gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] Length = 1103 Score = 271 bits (693), Expect(2) = 3e-98 Identities = 128/229 (55%), Positives = 173/229 (75%) Frame = +1 Query: 196 VPGVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMA 375 +PG++ I H L VDPS K V+ KRR ER +I+++E+ KLL + I E+ YP+W+A Sbjct: 1 MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKIVNDEVDKLLKIGSIREVQYPEWVA 60 Query: 376 NVVLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQI 555 N V+V+K+NGK RVCID+TDLNKACPKD +PLPHID+L+++T+G LL+FMDAFSG +QI Sbjct: 61 NTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFSGSNQI 120 Query: 556 SMCKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIV 735 M ED KT+FIT R +Y YK M FGL NAGATYQR++N +F + LG+ MEVY+DDM+V Sbjct: 121 MMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLV 180 Query: 736 KSMVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882 KS+ + H+ LEECF + + ++LN KCTFG+ G FLGY+V++RG Sbjct: 181 KSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERG 229 Score = 115 bits (288), Expect(2) = 3e-98 Identities = 64/139 (46%), Positives = 82/139 (58%) Frame = +2 Query: 875 RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054 RG+EAN +I A LNM +P++FK+VQRLTGRIAAL RF+SRS ++ LPF+ LKG K Sbjct: 228 RGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTDKSLPFYQILKG---NK 284 Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234 F W CE+AF +K YL++ P+L K V LV E G + Sbjct: 285 GFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVREDRGEQKPI 344 Query: 1235 YYVSHVLRDAETRYPNIEK 1291 YYVS + D ETRY +EK Sbjct: 345 YYVSKSMTDPETRYTMMEK 363 >emb|CAE05579.3| OSJNBa0032N05.7 [Oryza sativa Japonica Group] Length = 1154 Score = 271 bits (693), Expect(2) = 8e-98 Identities = 136/294 (46%), Positives = 186/294 (63%) Frame = +1 Query: 1 EIEPFTESSSKPLVMPAGETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFA 180 E EP + P P G+ ++ + V +G + E N++E+L D+FA Sbjct: 438 EAEPHDRAKHMPKPAPHGKVIRVQVDDADPTRFVSLGGDMGEREAENILEVLKKNIDIFA 497 Query: 181 WEPKDVPGVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDY 360 W P +V GVS + H L V P K + K R + +RQ E+ KLL I EID+ Sbjct: 498 WGPDEVGGVSADLIMHYLAVKPDAKPRKQKLRKMSVDRQEAAKAEVQKLLKTGVIQEIDH 557 Query: 361 PQWMANVVLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFS 540 P+W+AN VLV+K NGKWR+C+D+TDLNKACPKD +PLP IDQL+D+T+G L+SF+DA+S Sbjct: 558 PEWLANPVLVRKSNGKWRMCVDFTDLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYS 617 Query: 541 GYHQISMCKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYV 720 GYHQI M IPKTAFIT + + +M FGL NAGAT+ R++ + +LGRN+E YV Sbjct: 618 GYHQIHMNPAHIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGRNVEAYV 677 Query: 721 DDMIVKSMVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882 DD++VKS H+ DL+E F +R ++LN KC FG+R G LG+LVS+RG Sbjct: 678 DDIVVKSRKAFDHVSDLQETFDNLRVAGMKLNPEKCVFGVRAGKLLGFLVSERG 731 Score = 114 bits (284), Expect(2) = 8e-98 Identities = 64/140 (45%), Positives = 81/140 (57%) Frame = +2 Query: 875 RGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKGPKKEK 1054 RG+EANPEKI AI MK P S ++VQ+L G+IAAL RF+S++AER LPFF TL+G K Sbjct: 730 RGIEANPEKIDAIQQMKPPSSVREVQKLAGQIAALSRFLSKAAERGLPFFKTLRGAGK-- 787 Query: 1055 TFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGGN*HQV 1234 F WT +C+ AF +K Y S P LV V A LV E V Sbjct: 788 -FSWTPECQAAFDEVKQYPQSPPTLVSPALGSELLLYLAASPVAVSAALVQETESGQKPV 846 Query: 1235 YYVSHVLRDAETRYPNIEKF 1294 Y++S L+ A+ RY +EKF Sbjct: 847 YFISEALQGAKLRYIEMEKF 866 >gb|AAY99339.1| pol-polyprotein [Silene latifolia] Length = 1307 Score = 278 bits (710), Expect(2) = 4e-97 Identities = 139/287 (48%), Positives = 194/287 (67%) Frame = +1 Query: 22 SSSKPLVMPAGETKEFKLIHGKKNKTVKIGSGLPEPLRMNLIELL*CYADVFAWEPKDVP 201 S++ ++ ET++ ++ G+ TV +G GL R +L++LL DVFA+ ++P Sbjct: 235 STNNVSMVEGAETEQVEIDPGR---TVTVGVGLEPKFRADLLDLLRKNKDVFAYSAAEMP 291 Query: 202 GVSRKIAEHRLEVDPSKKLVR*KRRIFAPERQRIIDEEIAKLLAVDFIFEIDYPQWMANV 381 GVSR++ H+L V + + V+ K R + E+ I E+ KLL FI YP+W+ANV Sbjct: 292 GVSREVIVHKLNVLSNARPVKQKMRNSSAEKDDAIKAEVDKLLEAGFIMPCTYPEWLANV 351 Query: 382 VLVQKQNGKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLSFMDAFSGYHQISM 561 V+V+K +G WR+C+D+T+LNKACPKD YPLP ID LIDAT+ Y +LS +DAFSGYHQ+ M Sbjct: 352 VMVKKSSGGWRMCVDFTNLNKACPKDCYPLPRIDSLIDATASYTMLSLLDAFSGYHQVFM 411 Query: 562 CKEDIPKTAFITHRSVYAYKKMTFGLINAGATYQRMMNHIFRHRLGRNMEVYVDDMIVKS 741 +ED+ K AFIT Y YK M+FGL NAGATY R+++ +F+ + GRN+E YVDD IVKS Sbjct: 412 AEEDVLKCAFITIHGTYMYKMMSFGLKNAGATYTRLVDKVFQDQKGRNIEAYVDDAIVKS 471 Query: 742 MVVQKHLDDLEECFQTVRHHNLRLNSTKCTFGLRVG*FLGYLVSQRG 882 +HL DL E F ++R + ++LN KC FG+R G FLG LVS RG Sbjct: 472 KSDSEHLADLSETFCSLRKYKMKLNPMKCNFGVRAGKFLGVLVSARG 518 Score = 105 bits (261), Expect(2) = 4e-97 Identities = 58/144 (40%), Positives = 82/144 (56%) Frame = +2 Query: 860 VIWLVRGVEANPEKIQAILNMKTPQSFKDVQRLTGRIAALRRFMSRSAERCLPFFDTLKG 1039 V+ RG++ANPEK+QAIL++ P++ K+V LTGR+AAL RF+SRS ++ PFF LKG Sbjct: 512 VLVSARGIDANPEKVQAILDLLEPRNRKEVMMLTGRMAALARFISRSTDKSTPFFKVLKG 571 Query: 1040 PKKEKTFQWTSDCEDAFQGIKMYLSSAPLLVKFXXXXXXXXXXXXXXXXVRAFLV*EVGG 1219 K F W + AF+ +K +L + P L + V A ++ E Sbjct: 572 ---NKDFSWGEEQSTAFRQLKAHLITLPTLSRPMLGETLYLYIAVTSATVSAVIIREEDK 628 Query: 1220 N*HQVYYVSHVLRDAETRYPNIEK 1291 H +Y++SH L AET YP IEK Sbjct: 629 QQHPIYFISHTLLAAETNYPLIEK 652