BLASTX nr result
ID: Panax21_contig00022697
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022697
(600 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera] 140 1e-32
emb|CBI30685.3| unnamed protein product [Vitis vinifera] 140 1e-32
ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|2... 124 3e-28
ref|XP_002305069.1| predicted protein [Populus trichocarpa] gi|2... 128 3e-28
ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|3... 113 7e-25
>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
Length = 1135
Score = 140 bits (352), Expect(2) = 1e-32
Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 8/141 (5%)
Frame = +3
Query: 3 PPLPPVEWRAMKPNSDVAIEKQDTSFEALKHAIDLKHSPSTTSQQPKPAPVKHDQNTDAL 182
PPLPP++WRA+KP+SD+A EKQ EAL H DLK ST SQ +P + QN +A
Sbjct: 979 PPLPPLQWRALKPDSDMAEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNVEAN 1038
Query: 183 ICTTRS--------KQPDGQKDAKQPSHGKEMNEKEDFLQQIKTKSFSLRRTMTDRQTTT 338
C +S ++ +GQK+ + ++GK+M+E+EDFL+QI+TKSFSLRRT T R T
Sbjct: 1039 ACKPKSNVIEKQDRQKSNGQKEVNEAANGKKMDEREDFLEQIRTKSFSLRRTATPRLTVM 1098
Query: 339 PGAPANVKVTAILEKSNAIRQ 401
P NV VTAILEK+NAIRQ
Sbjct: 1099 PTPATNVSVTAILEKANAIRQ 1119
Score = 25.4 bits (54), Expect(2) = 1e-32
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 460 KSICQDVGGDDDSWSDT 510
+++ D G DDD+WSDT
Sbjct: 1119 QAVGSDDGEDDDNWSDT 1135
>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 140 bits (352), Expect(2) = 1e-32
Identities = 73/141 (51%), Positives = 95/141 (67%), Gaps = 8/141 (5%)
Frame = +3
Query: 3 PPLPPVEWRAMKPNSDVAIEKQDTSFEALKHAIDLKHSPSTTSQQPKPAPVKHDQNTDAL 182
PPLPP++WRA+KP+SD+A EKQ EAL H DLK ST SQ +P + QN +A
Sbjct: 685 PPLPPLQWRALKPDSDMAEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNVEAN 744
Query: 183 ICTTRS--------KQPDGQKDAKQPSHGKEMNEKEDFLQQIKTKSFSLRRTMTDRQTTT 338
C +S ++ +GQK+ + ++GK+M+E+EDFL+QI+TKSFSLRRT T R T
Sbjct: 745 ACKPKSNVIEKQDRQKSNGQKEVNEAANGKKMDEREDFLEQIRTKSFSLRRTATPRLTVM 804
Query: 339 PGAPANVKVTAILEKSNAIRQ 401
P NV VTAILEK+NAIRQ
Sbjct: 805 PTPATNVSVTAILEKANAIRQ 825
Score = 25.4 bits (54), Expect(2) = 1e-32
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 460 KSICQDVGGDDDSWSDT 510
+++ D G DDD+WSDT
Sbjct: 825 QAVGSDDGEDDDNWSDT 841
>ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|222859890|gb|EEE97437.1|
predicted protein [Populus trichocarpa]
Length = 937
Score = 124 bits (311), Expect(2) = 3e-28
Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = +3
Query: 3 PPLPPVEWRAMKPNSDVAIEKQDTSFEALKHAIDLKHSPSTTSQQPKPAPVKHDQNTDAL 182
PPLPPV+WR KP+S ++ KQ + +A +HA D+K ST QQPKPAP + +
Sbjct: 792 PPLPPVQWRVSKPHSGISEGKQHSLSKAHEHAFDIKPLESTVPQQPKPAPAVEQKMKE-- 849
Query: 183 ICTTRSKQPDGQKDAKQPSHGKEMNEKEDFLQQIKTKSFSLRRTMTDRQTTT-PGAPANV 359
T + +P +K+A Q ++GK+++EKEDFL QI+TKSF+LRRT T + TT G A+
Sbjct: 850 --DTIAFKPKSKKEANQSANGKDIDEKEDFLHQIRTKSFTLRRTATAKPTTLFSGPTASN 907
Query: 360 KVTAILEKSNAIRQ 401
KV+AILEK+NAIRQ
Sbjct: 908 KVSAILEKANAIRQ 921
Score = 26.6 bits (57), Expect(2) = 3e-28
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 460 KSICQDVGGDDDSWSDT 510
+++ D G DDD+WSDT
Sbjct: 921 QAVASDDGEDDDTWSDT 937
>ref|XP_002305069.1| predicted protein [Populus trichocarpa] gi|222848033|gb|EEE85580.1|
predicted protein [Populus trichocarpa]
Length = 298
Score = 128 bits (321), Expect(2) = 3e-28
Identities = 68/139 (48%), Positives = 91/139 (65%), Gaps = 6/139 (4%)
Frame = +3
Query: 3 PPLPPVEWRAMKPNSDVAIEKQDTSFEALKHAIDLKHSPSTTSQQPKPAPVK-HDQNTDA 179
PPLPPV+WR KPNSD++ K E +H D+K ST QQPKP+P H N D
Sbjct: 145 PPLPPVQWRVSKPNSDISEGKLHALSEGHEHGFDIKPLESTVPQQPKPSPADDHKMNEDT 204
Query: 180 LICTTRSKQPDGQK-----DAKQPSHGKEMNEKEDFLQQIKTKSFSLRRTMTDRQTTTPG 344
+ +SK+ D QK +A Q ++GK+++EK+DFL QI+TKSF+LRRT + + + G
Sbjct: 205 IAFKPKSKEQDQQKLNCHKEANQYANGKDIDEKDDFLHQIRTKSFTLRRTGKAKPSLSSG 264
Query: 345 APANVKVTAILEKSNAIRQ 401
AN KV+AILEK+NAIRQ
Sbjct: 265 PTANNKVSAILEKANAIRQ 283
Score = 22.7 bits (47), Expect(2) = 3e-28
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1
Query: 484 GDDDSWSDT 510
G+DD+WSDT
Sbjct: 290 GEDDTWSDT 298
>ref|XP_003629765.1| SCAR-like protein [Medicago truncatula] gi|355523787|gb|AET04241.1|
SCAR-like protein [Medicago truncatula]
Length = 1210
Score = 113 bits (283), Expect(2) = 7e-25
Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Frame = +3
Query: 3 PPLPPVEWRAMKPNSDVAIEKQDTSFEALKHAIDLKHSPSTTSQQPKPAPVK-----HD- 164
PP+PP +WR KP D + E Q++ E +H D ST QQP+ A V+ HD
Sbjct: 1051 PPVPPTQWRVTKPQLDKSNETQNSMSEDAEHLSDQNLPESTIFQQPRHAKVEKIQRNHDG 1110
Query: 165 -QNTDALICTTRSK----QPDGQKDAKQPSHGKEMNEKEDFLQQIKTKSFSLRRTMTDRQ 329
++ DA+I + K + + QK+A Q GK+++EKEDFL QI+TKSF+LR T+T +
Sbjct: 1111 FESYDAIINKLKEKLGPPKLNVQKEANQLRMGKDIDEKEDFLYQIRTKSFNLRPTVTGKS 1170
Query: 330 TTTPGAPANVKVTAILEKSNAIRQV 404
T G NVKVTAILEK+NAIRQV
Sbjct: 1171 NVTTGPTTNVKVTAILEKANAIRQV 1195
Score = 25.8 bits (55), Expect(2) = 7e-25
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 466 ICQDVGGDDDSWSDT 510
+ D G DDD+WSDT
Sbjct: 1196 VASDDGEDDDNWSDT 1210