BLASTX nr result

ID: Panax21_contig00022688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022688
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   379   e-103
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   370   e-100
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   370   e-100
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   352   6e-95
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   351   2e-94

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  379 bits (974), Expect = e-103
 Identities = 189/272 (69%), Positives = 213/272 (78%), Gaps = 1/272 (0%)
 Frame = +3

Query: 3   KHKMEGSTVRLVVKWADTEKERQARRDQKSQAQAPNIANADFPQHSTLFGAVPMGYMSPY 182
           KHKMEGS+V LVVKWADTEKERQARR QK Q+QA N+ NAD  QH +LFGA+PMGY+  Y
Sbjct: 166 KHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNAD-SQHPSLFGALPMGYVPQY 224

Query: 183 NGYGYQAPGTYGLMRYRLPPLQNQHALHNMLSPVNRGNALRS-VSLDVAPGMAPRNYTLP 359
           NGYGYQAPGTYGLM YRLPPLQ+Q A H+++ PVN+GNALR  V  D+ P M PRNY LP
Sbjct: 225 NGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALP 284

Query: 360 PSSYLGSAYPAVTGLQYPLAYHGGMMNNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 539
           P+SY+GSAYPAV G+QYP+AY GGMM+ R                              Q
Sbjct: 285 PASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQ 344

Query: 540 LEGPPGANLFIYHIPQEFGDQELANAFQPFGSILSAKVFVDKATGVSKCFGFVSYDSQAA 719
           LEGPPG+NLFIYHIPQEFGDQELA+AFQP+G +LSAKVFVDKATGVSKCFGFVSYDS  A
Sbjct: 345 LEGPPGSNLFIYHIPQEFGDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTA 404

Query: 720 AESAINMMNGCQLGSKKLKVQLKRDNKQNKPY 815
           A++AINMMNGCQLG KKLKVQLKRDNKQ+KPY
Sbjct: 405 AQTAINMMNGCQLGGKKLKVQLKRDNKQSKPY 436


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  370 bits (951), Expect = e-100
 Identities = 178/272 (65%), Positives = 216/272 (79%), Gaps = 1/272 (0%)
 Frame = +3

Query: 3   KHKMEGSTVRLVVKWADTEKERQARRDQKSQAQAPNIANADFPQHSTLFGAVPMGYMSPY 182
           KHKMEGS+V LVVKWADTEKERQAR+ QK+Q+QA N+ +AD  QH +LFGA+P+GY+ PY
Sbjct: 176 KHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPY 235

Query: 183 NGYGYQAPGTYGLMRYRLPPLQNQHALHNMLSPVNRGNALRSVSLDVAPGMAPRNYTLPP 362
           NGYGYQAPG YGLM+YR+PP+Q+Q A HNM+  VN+G+A+R+++ D+A  +APRNY +P 
Sbjct: 236 NGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPS 295

Query: 363 SSYLGSAYPAVTGLQYPLAYHGGMMNNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQL 542
           +SY+GSAYPA+ GLQYP+AYHGG+M+++                              Q+
Sbjct: 296 ASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQV 355

Query: 543 EGPPGANLFIYHIPQEFGDQELANAFQPFGSILSAKVFVDKATGVSKCFGFVSYDSQAAA 722
           EGPPGANLFIYHIPQEFGD ELA+AFQ FG +LSAKVFVDKATG SKCFGFVSYDS A+A
Sbjct: 356 EGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASA 415

Query: 723 ESAINMMNGCQLGSKKLKVQLKRD-NKQNKPY 815
           +SAI+MMNGCQLG KKLKVQLKRD NKQNKPY
Sbjct: 416 QSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 447


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  370 bits (951), Expect = e-100
 Identities = 178/272 (65%), Positives = 216/272 (79%), Gaps = 1/272 (0%)
 Frame = +3

Query: 3   KHKMEGSTVRLVVKWADTEKERQARRDQKSQAQAPNIANADFPQHSTLFGAVPMGYMSPY 182
           KHKMEGS+V LVVKWADTEKERQAR+ QK+Q+QA N+ +AD  QH +LFGA+P+GY+ PY
Sbjct: 166 KHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPY 225

Query: 183 NGYGYQAPGTYGLMRYRLPPLQNQHALHNMLSPVNRGNALRSVSLDVAPGMAPRNYTLPP 362
           NGYGYQAPG YGLM+YR+PP+Q+Q A HNM+  VN+G+A+R+++ D+A  +APRNY +P 
Sbjct: 226 NGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPS 285

Query: 363 SSYLGSAYPAVTGLQYPLAYHGGMMNNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQL 542
           +SY+GSAYPA+ GLQYP+AYHGG+M+++                              Q+
Sbjct: 286 ASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQV 345

Query: 543 EGPPGANLFIYHIPQEFGDQELANAFQPFGSILSAKVFVDKATGVSKCFGFVSYDSQAAA 722
           EGPPGANLFIYHIPQEFGD ELA+AFQ FG +LSAKVFVDKATG SKCFGFVSYDS A+A
Sbjct: 346 EGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASA 405

Query: 723 ESAINMMNGCQLGSKKLKVQLKRD-NKQNKPY 815
           +SAI+MMNGCQLG KKLKVQLKRD NKQNKPY
Sbjct: 406 QSAISMMNGCQLGGKKLKVQLKRDNNKQNKPY 437


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  352 bits (904), Expect = 6e-95
 Identities = 178/271 (65%), Positives = 204/271 (75%)
 Frame = +3

Query: 3   KHKMEGSTVRLVVKWADTEKERQARRDQKSQAQAPNIANADFPQHSTLFGAVPMGYMSPY 182
           KHKMEGS+V LVVKWADTEKERQARR QK+Q+QA N+ + D  QH +LFGA+PM Y+ PY
Sbjct: 166 KHKMEGSSVPLVVKWADTEKERQARRAQKAQSQASNVPHTD-SQHPSLFGALPMSYVPPY 224

Query: 183 NGYGYQAPGTYGLMRYRLPPLQNQHALHNMLSPVNRGNALRSVSLDVAPGMAPRNYTLPP 362
           NGYGYQAP  YGLM YR+PP+Q+QH  HNM+  +N+GNALR    D+ P M PRNY +PP
Sbjct: 225 NGYGYQAPVGYGLMPYRMPPMQSQHGYHNMMPHMNQGNALRP---DLGPNMNPRNYHVPP 281

Query: 363 SSYLGSAYPAVTGLQYPLAYHGGMMNNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQL 542
           +SY+GS YPAV GLQ+P+AY  GM++ R                              Q 
Sbjct: 282 ASYVGS-YPAVPGLQHPMAYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQA 340

Query: 543 EGPPGANLFIYHIPQEFGDQELANAFQPFGSILSAKVFVDKATGVSKCFGFVSYDSQAAA 722
           EGPPGANLFIYHIPQEFGDQELA AFQPFG +LSAKVFVDKATGVSKCFGFVSYD+  AA
Sbjct: 341 EGPPGANLFIYHIPQEFGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAA 400

Query: 723 ESAINMMNGCQLGSKKLKVQLKRDNKQNKPY 815
           +SAI+MMNGCQLG KKLKVQLKRDNKQ KPY
Sbjct: 401 QSAISMMNGCQLGGKKLKVQLKRDNKQGKPY 431


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  351 bits (900), Expect = 2e-94
 Identities = 179/271 (66%), Positives = 205/271 (75%), Gaps = 1/271 (0%)
 Frame = +3

Query: 3   KHKMEGSTVRLVVKWADTEKERQARRDQKSQAQAPNIANADFPQHSTLFGAVPMGYMSPY 182
           KHKMEGS+V LVVKWADTEKERQARR QK+Q+QA  + N D  QH +LFGA+PMGY  PY
Sbjct: 167 KHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA--MPNTD-SQHPSLFGALPMGYAPPY 223

Query: 183 NGYGYQAPGTYGLMRYRLPPLQNQHALHNMLSPVNRGNALRS-VSLDVAPGMAPRNYTLP 359
           NGYGYQAPG YGLM YRLPP+QNQ A H+M+ PVN+GN LR  +  D++P ++PRNY   
Sbjct: 224 NGYGYQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA-- 281

Query: 360 PSSYLGSAYPAVTGLQYPLAYHGGMMNNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 539
           P++Y+GSAYP VTGLQYP+AY G MM +R                              Q
Sbjct: 282 PATYMGSAYPTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQ 341

Query: 540 LEGPPGANLFIYHIPQEFGDQELANAFQPFGSILSAKVFVDKATGVSKCFGFVSYDSQAA 719
           +EGPPGANLFIYHIPQEFGDQELANAF+ FG +LSAKVFVDK TGVSKCFGFVSYDS AA
Sbjct: 342 VEGPPGANLFIYHIPQEFGDQELANAFEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAA 401

Query: 720 AESAINMMNGCQLGSKKLKVQLKRDNKQNKP 812
           A++AI MMNG QLG KKLKVQLKRDNKQ+KP
Sbjct: 402 AQNAITMMNGFQLGGKKLKVQLKRDNKQSKP 432


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