BLASTX nr result

ID: Panax21_contig00022661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022661
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   189   6e-46
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   160   3e-37
gb|EEC76110.1| hypothetical protein OsI_13372 [Oryza sativa Indi...   159   5e-37
ref|NP_001051138.1| Os03g0726900 [Oryza sativa Japonica Group] g...   159   5e-37

>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  189 bits (480), Expect = 6e-46
 Identities = 86/110 (78%), Positives = 95/110 (86%)
 Frame = +2

Query: 167 CLNRMKDKLLPENLSSIFETQLPGPPIVQKNDQQTECGICYAQYLPFDDELGASSGSGTD 346
           C   M+DK   ENL SI ET+LP PP VQKNDQQ ECGICYAQYLP DDELG  SG+GTD
Sbjct: 148 CKQWMQDKTFLENLLSILETELPKPPDVQKNDQQIECGICYAQYLPIDDELGPRSGTGTD 207

Query: 347 YTCDNNVCSRAYHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKIN 496
           YTCDN+ C+RA+HS+CLGDWLRSITTTRQS++VLFGNCPYCSEPVAVKIN
Sbjct: 208 YTCDNSNCNRAFHSICLGDWLRSITTTRQSYNVLFGNCPYCSEPVAVKIN 257


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  184 bits (468), Expect = 1e-44
 Identities = 83/109 (76%), Positives = 95/109 (87%)
 Frame = +2

Query: 179 MKDKLLPENLSSIFETQLPGPPIVQKNDQQTECGICYAQYLPFDDELGASSGSGTDYTCD 358
           MKDK LPENL+ I ET+LP P  V +NDQQ ECGICYAQYLP D+ELG+ SG+GTD+TCD
Sbjct: 159 MKDKTLPENLAFILETELPRPSHVLENDQQVECGICYAQYLPIDEELGSRSGAGTDHTCD 218

Query: 359 NNVCSRAYHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKINNKR 505
           N  C RA+H+VCL DWLRSITTTRQSFDVLFGNCPYCSEPVAVK+N+K+
Sbjct: 219 NTSCGRAFHTVCLVDWLRSITTTRQSFDVLFGNCPYCSEPVAVKLNDKK 267


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  160 bits (405), Expect = 3e-37
 Identities = 74/108 (68%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
 Frame = +2

Query: 182 KDKLLPENLSSIFETQLPGPPIVQK--NDQQTECGICYAQYLPFDDELGASSGSGTDYTC 355
           K++  PENL  I  T+LP P  +Q+  N QQ ECGICYAQ+LP D+ELGA SG+ TDYTC
Sbjct: 192 KERPFPENLECILGTELPKPLGLQEEENQQQVECGICYAQFLPTDEELGARSGTQTDYTC 251

Query: 356 DNNVCSRAYHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKINN 499
           +N  C++++HS+CL DWLRSITTTRQSFDVLFGNCPYCS+PVAVKINN
Sbjct: 252 ENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKINN 299


>gb|EEC76110.1| hypothetical protein OsI_13372 [Oryza sativa Indica Group]
          Length = 308

 Score =  159 bits (403), Expect = 5e-37
 Identities = 73/113 (64%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = +2

Query: 167 CLNRMKDKLLPENLSSIFETQLPGPPIVQ-KNDQQTECGICYAQYLPFDDELGASSGSGT 343
           C     DK   ENLS++ +  LP PP V  ++D+Q +CGICYA++LP DDELG  SG  T
Sbjct: 196 CKKWSADKKFHENLSTVLDFALPPPPSVNIEDDEQVDCGICYAKHLPIDDELGTHSGGTT 255

Query: 344 DYTCDNNVCSRAYHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKINNK 502
           DYTC+N  CSRA+HSVCL DWLR+ITTTRQSFDVLFGNCPYCS+PVAVKI ++
Sbjct: 256 DYTCENPSCSRAFHSVCLRDWLRAITTTRQSFDVLFGNCPYCSDPVAVKITDR 308


>ref|NP_001051138.1| Os03g0726900 [Oryza sativa Japonica Group]
           gi|41469280|gb|AAS07162.1| expressed protein (with
           alternative splicing) [Oryza sativa Japonica Group]
           gi|108710855|gb|ABF98650.1| Ubiquitin ligase protein
           FANCL, putative, expressed [Oryza sativa Japonica Group]
           gi|113549609|dbj|BAF13052.1| Os03g0726900 [Oryza sativa
           Japonica Group] gi|215704189|dbj|BAG93029.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222625718|gb|EEE59850.1| hypothetical protein
           OsJ_12426 [Oryza sativa Japonica Group]
          Length = 308

 Score =  159 bits (403), Expect = 5e-37
 Identities = 73/113 (64%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = +2

Query: 167 CLNRMKDKLLPENLSSIFETQLPGPPIVQ-KNDQQTECGICYAQYLPFDDELGASSGSGT 343
           C     DK   ENLS++ +  LP PP V  ++D+Q +CGICYA++LP DDELG  SG  T
Sbjct: 196 CKKWSADKKFHENLSTVLDFALPPPPSVNIEDDEQVDCGICYAKHLPIDDELGTHSGGTT 255

Query: 344 DYTCDNNVCSRAYHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKINNK 502
           DYTC+N  CSRA+HSVCL DWLR+ITTTRQSFDVLFGNCPYCS+PVAVKI ++
Sbjct: 256 DYTCENPSCSRAFHSVCLRDWLRAITTTRQSFDVLFGNCPYCSDPVAVKITDR 308


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