BLASTX nr result

ID: Panax21_contig00022658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022658
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134597.1| PREDICTED: two-pore potassium channel 3-like...   303   4e-80
gb|ABX60975.1| TPK1 [Nicotiana tabacum]                               299   8e-79
ref|XP_002331863.1| outward rectifying potassium channel [Populu...   284   3e-74
ref|XP_002519734.1| Calcium-activated outward-rectifying potassi...   283   5e-74
ref|XP_002272049.1| PREDICTED: probable calcium-activated outwar...   283   6e-74

>ref|XP_004134597.1| PREDICTED: two-pore potassium channel 3-like [Cucumis sativus]
            gi|449505938|ref|XP_004162609.1| PREDICTED: two-pore
            potassium channel 3-like [Cucumis sativus]
          Length = 425

 Score =  303 bits (777), Expect = 4e-80
 Identities = 172/308 (55%), Positives = 193/308 (62%), Gaps = 7/308 (2%)
 Frame = +2

Query: 293  MEKEPLLXXXXXXXXXXXXXXXXXXXXEDDAIXXXXXXXXXXXXXXXXELKDRLIFGXXX 472
            MEKEPLL                    E+D I                E KDRLIFG   
Sbjct: 1    MEKEPLLPYLSPRGKPSPIPPQLCPLPENDEITLPMTPT---------EFKDRLIFGPSS 51

Query: 473  XXXXXXXLVDALTLTLNXXXXXXXXXXXXXXXXXX------QTQHWLIDPNYPWHKSNLH 634
                   + DALTL+L+                          Q WL+D NY W KSNLH
Sbjct: 52   SPQDASPIFDALTLSLSSSRPSASSSLQDPSTPLDPRSQSQSQQAWLVDSNYTWPKSNLH 111

Query: 635  RSKTAPAMAAINDVEHPSVPKPPQFGSSSAIVRQAVVLLILYLTLGVIIYWSNKDHFKAI 814
            RS+TAPAMA INDV H   PKP QFG  S I+RQAVVLLI+YL+LGV+IYW N+D+F A 
Sbjct: 112  RSRTAPAMAVINDVNHSQEPKP-QFGKQS-IIRQAVVLLIVYLSLGVLIYWLNRDNFSAQ 169

Query: 815  ETHPVVDALYFCIVTMCTIGYGDITPDSTATKLFSIMFVLVGFGFIDILLSGMVSYVLDL 994
            ETHPVVDALYFCIVTMCTIGYGDITP+ST+TKLFS++FVLVGFGFIDILLSGMVSYVLDL
Sbjct: 170  ETHPVVDALYFCIVTMCTIGYGDITPNSTSTKLFSVLFVLVGFGFIDILLSGMVSYVLDL 229

Query: 995  QENYLLRTIKLG-RQHDGRSYIIDFKKGRMRIRMKXXXXXXXXXXXXXXXXXXMHFVENL 1171
            QE+YLLR +K G ++  G+SYIID KKGRMRIRMK                  MHFVENL
Sbjct: 230  QESYLLRNVKRGVKRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENL 289

Query: 1172 GWLDSFYL 1195
            GWLDSFYL
Sbjct: 290  GWLDSFYL 297


>gb|ABX60975.1| TPK1 [Nicotiana tabacum]
          Length = 428

 Score =  299 bits (766), Expect = 8e-79
 Identities = 153/203 (75%), Positives = 163/203 (80%), Gaps = 1/203 (0%)
 Frame = +2

Query: 590  WLIDPNYP-WHKSNLHRSKTAPAMAAINDVEHPSVPKPPQFGSSSAIVRQAVVLLILYLT 766
            WL+DPNYP W KSNLHRSKTAPAMA IND++H   PKPPQFG ++ IV Q VVLLILYLT
Sbjct: 98   WLLDPNYPSWTKSNLHRSKTAPAMATINDIDHSPDPKPPQFGKNT-IVGQGVVLLILYLT 156

Query: 767  LGVIIYWSNKDHFKAIETHPVVDALYFCIVTMCTIGYGDITPDSTATKLFSIMFVLVGFG 946
            LGV IY   +DHFKA ETHPVVDALYFCIVTMCTIGYGDITPDST TKLFSI+FVLVGFG
Sbjct: 157  LGVGIYSLFRDHFKATETHPVVDALYFCIVTMCTIGYGDITPDSTPTKLFSILFVLVGFG 216

Query: 947  FIDILLSGMVSYVLDLQENYLLRTIKLGRQHDGRSYIIDFKKGRMRIRMKXXXXXXXXXX 1126
            FIDILL+GMVSYVLDLQENYLLR+IK G  HD RSYIID KKGRMRIRMK          
Sbjct: 217  FIDILLTGMVSYVLDLQENYLLRSIKSGSVHDARSYIIDVKKGRMRIRMKVALALGVVVL 276

Query: 1127 XXXXXXXXMHFVENLGWLDSFYL 1195
                    MHFVE LGWLD+FYL
Sbjct: 277  CIGIGVAVMHFVEKLGWLDAFYL 299


>ref|XP_002331863.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222875381|gb|EEF12512.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 435

 Score =  284 bits (727), Expect = 3e-74
 Identities = 168/316 (53%), Positives = 190/316 (60%), Gaps = 15/316 (4%)
 Frame = +2

Query: 293  MEKEPLLXXXXXXXXXXXXXXXXXXXXEDDAIXXXXXXXXXXXXXXXXELKDRLIFGXXX 472
            MEKEPLL                    EDD I                ELKDRLIFG   
Sbjct: 1    MEKEPLLPYLSPRKRIPQPQPPLFPLPEDDEISLPLPLTPS-------ELKDRLIFGPSS 53

Query: 473  XXXXXXX-LVDALTLTLNXXXXXXXXXXXXXXXXXXQTQH-------------WLIDPNY 610
                    L++ALTL+LN                    QH             WL+DP+ 
Sbjct: 54   ASPRDPSPLLEALTLSLNSPRSSTPNLDFSSFLDSPHLQHHHQQQQQQQQQQSWLVDPDC 113

Query: 611  PWHKSNLHRSKTAPAMAAINDVEHPSVPKPPQFGSSSAIVRQAVVLLILYLTLGVIIYWS 790
             W K+NLHRSKTAPAMA IND+ HP++ KP +FGS S IVRQA VLL+LYL+LGV+IY  
Sbjct: 114  QWTKTNLHRSKTAPAMAVINDLNHPAITKP-KFGSQS-IVRQAFVLLVLYLSLGVLIYSL 171

Query: 791  NKDHFKAIETHPVVDALYFCIVTMCTIGYGDITPDSTATKLFSIMFVLVGFGFIDILLSG 970
            N+D FK   T+PVVDALYFCIVTMCTIGYGDITPDSTATKLFSI+FVL+GFGF+DILLSG
Sbjct: 172  NRDKFKGNATNPVVDALYFCIVTMCTIGYGDITPDSTATKLFSILFVLIGFGFVDILLSG 231

Query: 971  MVSYVLDLQENYLLRTIKLG-RQHDGRSYIIDFKKGRMRIRMKXXXXXXXXXXXXXXXXX 1147
            MVSYVLDLQE++LLR +K G  +    SYIID KKGRMRIRMK                 
Sbjct: 232  MVSYVLDLQESHLLRNVKRGVEKESAGSYIIDVKKGRMRIRMKVGLALGVVVLCIGVGVA 291

Query: 1148 XMHFVENLGWLDSFYL 1195
             MHFVE LGWLDS YL
Sbjct: 292  FMHFVERLGWLDSLYL 307


>ref|XP_002519734.1| Calcium-activated outward-rectifying potassium channel, putative
            [Ricinus communis] gi|223541151|gb|EEF42707.1|
            Calcium-activated outward-rectifying potassium channel,
            putative [Ricinus communis]
          Length = 426

 Score =  283 bits (725), Expect = 5e-74
 Identities = 157/257 (61%), Positives = 173/257 (67%), Gaps = 4/257 (1%)
 Frame = +2

Query: 437  ELKDRLIFGXXXXXXXXXXLVDALTLTLNXXXXXXXXXXXXXXXXXX---QTQHWLIDPN 607
            ELK+RLIFG          + +ALT +LN                     Q Q WLIDPN
Sbjct: 43   ELKERLIFGPSPSPNDSTPVFEALTHSLNSPRPSCSNQEFNFHDSPRHHQQPQSWLIDPN 102

Query: 608  YPWHKSNLHRSKTAPAMAAINDVEHPSVPKPPQFGSSSAIVRQAVVLLILYLTLGVIIYW 787
            Y W K+NLHRSKTAPAMA IND  + S    PQFGS S IVRQA VLLILYL+ GV+IYW
Sbjct: 103  YSWTKTNLHRSKTAPAMAVINDSLNSSHIPKPQFGSQS-IVRQAFVLLILYLSFGVVIYW 161

Query: 788  SNKDHFKAIETHPVVDALYFCIVTMCTIGYGDITPDSTATKLFSIMFVLVGFGFIDILLS 967
             N+ +F A ETHPVVDA YFCIVTMCTIGYGDITP+ST+TKLFSI+FVLVGFGFIDILLS
Sbjct: 162  LNRGNFLANETHPVVDAFYFCIVTMCTIGYGDITPNSTSTKLFSILFVLVGFGFIDILLS 221

Query: 968  GMVSYVLDLQENYLLRTIKLGRQHDGR-SYIIDFKKGRMRIRMKXXXXXXXXXXXXXXXX 1144
            GMVSY+LDLQENYLLR  K G   +   S I D KKGRMRIRMK                
Sbjct: 222  GMVSYMLDLQENYLLRNAKRGGDKEAAGSVIFDVKKGRMRIRMKVALALGVVVLCIGVGC 281

Query: 1145 XXMHFVENLGWLDSFYL 1195
              MHF+ENLGWLDSFYL
Sbjct: 282  GVMHFLENLGWLDSFYL 298


>ref|XP_002272049.1| PREDICTED: probable calcium-activated outward-rectifying potassium
            channel 6-like [Vitis vinifera]
          Length = 509

 Score =  283 bits (724), Expect = 6e-74
 Identities = 161/262 (61%), Positives = 174/262 (66%), Gaps = 9/262 (3%)
 Frame = +2

Query: 437  ELKDRLIFGXXXXXXXXXX--LVDALTLTLNXXXXXXXXXXXXXXXXXXQTQHWLIDPNY 610
            E KDRLIFG            L+DALTLT+N                  Q Q WL+DP  
Sbjct: 124  EFKDRLIFGPSSSSPSDSSPLLIDALTLTINSPKTSSSIDQDPLLQP--QLQPWLVDPQS 181

Query: 611  PW-------HKSNLHRSKTAPAMAAINDVEHPSVPKPPQFGSSSAIVRQAVVLLILYLTL 769
             W        K+NLHRSKTAPAMA IND +HPS P+P QF S S IVRQ  VLL++YL L
Sbjct: 182  NWPKTNLHRSKTNLHRSKTAPAMAVINDFQHPSGPRP-QFRSPS-IVRQGFVLLVVYLLL 239

Query: 770  GVIIYWSNKDHFKAIETHPVVDALYFCIVTMCTIGYGDITPDSTATKLFSIMFVLVGFGF 949
            G+ IYW N+D F A ETHPVVDALYFCIVTMCTIGYGDITP ST+TKLFSI+FVLVGFGF
Sbjct: 240  GIAIYWFNRDDFSADETHPVVDALYFCIVTMCTIGYGDITPVSTSTKLFSILFVLVGFGF 299

Query: 950  IDILLSGMVSYVLDLQENYLLRTIKLGRQHDGRSYIIDFKKGRMRIRMKXXXXXXXXXXX 1129
            IDILLSGMVSYVLDLQENYLLR+ K   Q D  SYIID KKGRMRIRMK           
Sbjct: 300  IDILLSGMVSYVLDLQENYLLRSAKGVGQRDTGSYIIDVKKGRMRIRMKVALALGVVVLC 359

Query: 1130 XXXXXXXMHFVENLGWLDSFYL 1195
                   MHFVE L WLDSFYL
Sbjct: 360  IGIGVGVMHFVEELDWLDSFYL 381


Top