BLASTX nr result
ID: Panax21_contig00022539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022539
(1829 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi... 401 e-109
emb|CBI17228.3| unnamed protein product [Vitis vinifera] 401 e-109
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi... 352 1e-94
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2... 338 4e-90
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar... 297 6e-78
>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
[Vitis vinifera]
Length = 677
Score = 401 bits (1030), Expect = e-109
Identities = 188/271 (69%), Positives = 221/271 (81%)
Frame = +1
Query: 4 VVFLAILTACSHAGQVEWGLHFFDCMKLDFSIKPTIKHYAVVVDLFGRAGRLDEAFSFIQ 183
V+FLAILTACSH+G V+ GL+FF+ M+LD+SI+PT+KHY ++VDL GRAGRLDEA SFIQ
Sbjct: 407 VIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQ 466
Query: 184 NMPLEPDLVIWGALFCACRAHKNIKMAEYASQRLLELETKHPGSYVFLSNIYAGVGRWED 363
+MP+ PD VIWGALFCACRAHKNI+MAE +++LL+LE KHPGSYVFLSN+YA VGRWED
Sbjct: 467 SMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWED 526
Query: 364 VERVRTSMKDTGLEKEPGWSYIEVGGQVHSFVAGDRSHALTEELYMKLEEITFSAREQGY 543
VERVRT MK+ G+EK+PGWSYIEV GQVHSFVAGD +H EE+ +KLEEIT SA+++GY
Sbjct: 527 VERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 586
Query: 544 MPXXXXXXXXXXXXXXXXXXXXXXXXXALGFALISTAPGTTIRIVKNLRVCGDCHSMMKF 723
MP AL F LISTAPG+TIRIVKNLRVCGDCHSMMK+
Sbjct: 587 MPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKY 646
Query: 724 ISKMSQREILLRDIKRFHHFKDGTCSCQDYW 816
SK+S+REI+LRDIKRFHHFKDGTCSC DYW
Sbjct: 647 ASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 401 bits (1030), Expect = e-109
Identities = 188/271 (69%), Positives = 221/271 (81%)
Frame = +1
Query: 4 VVFLAILTACSHAGQVEWGLHFFDCMKLDFSIKPTIKHYAVVVDLFGRAGRLDEAFSFIQ 183
V+FLAILTACSH+G V+ GL+FF+ M+LD+SI+PT+KHY ++VDL GRAGRLDEA SFIQ
Sbjct: 320 VIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQ 379
Query: 184 NMPLEPDLVIWGALFCACRAHKNIKMAEYASQRLLELETKHPGSYVFLSNIYAGVGRWED 363
+MP+ PD VIWGALFCACRAHKNI+MAE +++LL+LE KHPGSYVFLSN+YA VGRWED
Sbjct: 380 SMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWED 439
Query: 364 VERVRTSMKDTGLEKEPGWSYIEVGGQVHSFVAGDRSHALTEELYMKLEEITFSAREQGY 543
VERVRT MK+ G+EK+PGWSYIEV GQVHSFVAGD +H EE+ +KLEEIT SA+++GY
Sbjct: 440 VERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 499
Query: 544 MPXXXXXXXXXXXXXXXXXXXXXXXXXALGFALISTAPGTTIRIVKNLRVCGDCHSMMKF 723
MP AL F LISTAPG+TIRIVKNLRVCGDCHSMMK+
Sbjct: 500 MPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKY 559
Query: 724 ISKMSQREILLRDIKRFHHFKDGTCSCQDYW 816
SK+S+REI+LRDIKRFHHFKDGTCSC DYW
Sbjct: 560 ASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
[Cucumis sativus] gi|449505311|ref|XP_004162432.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 352 bits (904), Expect = 1e-94
Identities = 165/271 (60%), Positives = 200/271 (73%)
Frame = +1
Query: 4 VVFLAILTACSHAGQVEWGLHFFDCMKLDFSIKPTIKHYAVVVDLFGRAGRLDEAFSFIQ 183
VVFLA+L ACSH+GQV GL FFD M+ + I+P++KHY +VVD+ GRAGRLDEA FI+
Sbjct: 409 VVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIR 468
Query: 184 NMPLEPDLVIWGALFCACRAHKNIKMAEYASQRLLELETKHPGSYVFLSNIYAGVGRWED 363
MP+ PD V+WGALFCACR HKN++MAE AS++LL+LE KHPGSYVFLSN YA VGRW+D
Sbjct: 469 AMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDD 528
Query: 364 VERVRTSMKDTGLEKEPGWSYIEVGGQVHSFVAGDRSHALTEELYMKLEEITFSAREQGY 543
ERVR SM+D G K+PGWS+IEV ++H FVAGD +H E+Y KL+EI+ SARE+GY
Sbjct: 529 AERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGY 588
Query: 544 MPXXXXXXXXXXXXXXXXXXXXXXXXXALGFALISTAPGTTIRIVKNLRVCGDCHSMMKF 723
AL F ++ST PGTT+RIVKNLRVC DCHS MK+
Sbjct: 589 TKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKY 648
Query: 724 ISKMSQREILLRDIKRFHHFKDGTCSCQDYW 816
SKMS+REI+LRD+KRFHHF DG CSC DYW
Sbjct: 649 ASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
predicted protein [Populus trichocarpa]
Length = 719
Score = 338 bits (866), Expect = 4e-90
Identities = 157/271 (57%), Positives = 201/271 (74%)
Frame = +1
Query: 4 VVFLAILTACSHAGQVEWGLHFFDCMKLDFSIKPTIKHYAVVVDLFGRAGRLDEAFSFIQ 183
VVFLA+LTAC H+GQV+ GL+FFD M+LD+ I+P++KHY ++VD+ GR+G+L EA FI+
Sbjct: 449 VVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIE 508
Query: 184 NMPLEPDLVIWGALFCACRAHKNIKMAEYASQRLLELETKHPGSYVFLSNIYAGVGRWED 363
MP+ PD VIWGALFCACRAHK KMA++A +LL+LE H G+Y+FLSN YA +G+WED
Sbjct: 509 RMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWED 568
Query: 364 VERVRTSMKDTGLEKEPGWSYIEVGGQVHSFVAGDRSHALTEELYMKLEEITFSAREQGY 543
ERVR M++ G+ K GWS IEV GQVH FV+GD H ++ + +KLEEI A +QGY
Sbjct: 569 AERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGY 628
Query: 544 MPXXXXXXXXXXXXXXXXXXXXXXXXXALGFALISTAPGTTIRIVKNLRVCGDCHSMMKF 723
+P AL FALI T+PG TIRIVKNL+VCGDCHS+MK+
Sbjct: 629 IPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKY 688
Query: 724 ISKMSQREILLRDIKRFHHFKDGTCSCQDYW 816
SK+SQREI+LRD+KRFHHFKDG+CSC+D+W
Sbjct: 689 ASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
[Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 665
Score = 297 bits (761), Expect = 6e-78
Identities = 141/271 (52%), Positives = 189/271 (69%)
Frame = +1
Query: 4 VVFLAILTACSHAGQVEWGLHFFDCMKLDFSIKPTIKHYAVVVDLFGRAGRLDEAFSFIQ 183
VVFLA+LTAC ++ +V+ GL+FFD M+LD++I+PT+KHY +VVDL GRAG+L+EA ++
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 184 NMPLEPDLVIWGALFCACRAHKNIKMAEYASQRLLELETKHPGSYVFLSNIYAGVGRWED 363
NMP+ PDL W AL+ AC+AHK + AE SQ LLEL+ + GSY+FL +A G +D
Sbjct: 455 NMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQD 514
Query: 364 VERVRTSMKDTGLEKEPGWSYIEVGGQVHSFVAGDRSHALTEELYMKLEEITFSAREQGY 543
VE+ R S++ E+ GWSYIE+ GQ++ F AGD SH LT+E+ +KL+EI A ++GY
Sbjct: 515 VEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGY 574
Query: 544 MPXXXXXXXXXXXXXXXXXXXXXXXXXALGFALISTAPGTTIRIVKNLRVCGDCHSMMKF 723
P AL + TAPGTTIRI+KNLR+CGDCHS+MK+
Sbjct: 575 NPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKY 634
Query: 724 ISKMSQREILLRDIKRFHHFKDGTCSCQDYW 816
+SK+SQR+ILLRD ++FHHFKDG CSC DYW
Sbjct: 635 VSKISQRDILLRDARQFHHFKDGRCSCGDYW 665