BLASTX nr result

ID: Panax21_contig00022530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022530
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21075.3| unnamed protein product [Vitis vinifera]               59   9e-07
ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...    59   9e-07
ref|XP_002867271.1| armadillo/beta-catenin repeat family protein...    56   6e-06

>emb|CBI21075.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 272 MAKCHRNDVASVVLDRSTGGGSGFKLWSTFTGGSFRRKIIDTMRXXXXXXXXXTS-ASDK 448
           MAKC RNDV S+VL+R+ GGGS F+L+S+ +G +FR+K+ D +R            A  +
Sbjct: 1   MAKCERNDVGSLVLNRAAGGGS-FRLFSSSSGATFRKKVFDFVRCGGSRHFREDEVAGVQ 59

Query: 449 PEQKVPEKRPECRSDPKKNG 508
           P    PE   E RS+P++ G
Sbjct: 60  PLPLAPEPAQE-RSEPRRKG 78


>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 272 MAKCHRNDVASVVLDRSTGGGSGFKLWSTFTGGSFRRKIIDTMRXXXXXXXXXTS-ASDK 448
           MAKC RNDV S+VL+R+ GGGS F+L+S+ +G +FR+K+ D +R            A  +
Sbjct: 1   MAKCERNDVGSLVLNRAAGGGS-FRLFSSSSGATFRKKVFDFVRCGGSRHFREDEVAGVQ 59

Query: 449 PEQKVPEKRPECRSDPKKNG 508
           P    PE   E RS+P++ G
Sbjct: 60  PLPLAPEPAQE-RSEPRRKG 78


>ref|XP_002867271.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313107|gb|EFH43530.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 6/49 (12%)
 Frame = +2

Query: 272 MAKCHRNDVASVVLDR------STGGGSGFKLWSTFTGGSFRRKIIDTM 400
           MAKCHRN++ S++LDR      S+  G+ F+LWSTF+  +FRRKI+D +
Sbjct: 1   MAKCHRNNIGSLILDRAPSTSSSSTSGNHFRLWSTFSRSTFRRKIVDAV 49


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