BLASTX nr result

ID: Panax21_contig00022499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022499
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20286.3| unnamed protein product [Vitis vinifera]              212   8e-53
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...   161   2e-37
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...   150   3e-34
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...   142   8e-32
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   132   1e-28

>emb|CBI20286.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  212 bits (540), Expect = 8e-53
 Identities = 122/273 (44%), Positives = 168/273 (61%), Gaps = 19/273 (6%)
 Frame = +1

Query: 142 NEGDCKSEDWISQMPDDILVIILSHLSLKDAVATSLLSRQWRYLWTCISGMNFDANAALD 321
           ++GD   ED +S++PD+IL+ ILS L+L++A ATS+LS++WRYLWT  S +NFD+   ++
Sbjct: 15  DDGDF-GEDLLSELPDEILISILSRLTLREAAATSVLSQRWRYLWTYTSRLNFDS--VVN 71

Query: 322 KIAAEPKL--------RRVERPKYINWVNRVVGKHRGV-TIDEFRICFDLDKSSKTAIDR 474
           KI              RR  R KYI WV++V+ K+RG   +DEFR+CFDL K S++ ID+
Sbjct: 72  KIVRRSHSFALSTAAGRRRRRRKYIKWVHKVLAKYRGGRNLDEFRVCFDLSKRSRSDIDK 131

Query: 475 WIKFAIGKRVQRLELDLLERGETL--RQP--------SRNYAFPYKLLTQSKGSSSKRLC 624
           W +FA+ K V+ LE D L        R P           Y FP+++L   +      + 
Sbjct: 132 WFEFAMSKNVKNLEFDFLRCSSQNQDRDPWFVMLSYFQNFYKFPHRILGVREARDPNGM- 190

Query: 625 LNIPSMEPCTLIGLKFLKDLSLKCVNVGEKALGNILSNCPVLESLSMHGSGDLVNVRINS 804
                      +G K LK LSLK +NV  +A+   LSNCP+LE LS+HGS  LVN+R+  
Sbjct: 191 ----------FVGFKSLKTLSLKSINVSSEAVEYFLSNCPLLERLSVHGSESLVNLRVAG 240

Query: 805 PSLMLRNLEIVFCLGIETIEICGTNLVSFSYLG 903
           PS+MLR+LEIV C  I+TIEIC TNLVSF+Y G
Sbjct: 241 PSIMLRHLEIVKCSSIQTIEICDTNLVSFTYRG 273


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37
 Identities = 97/247 (39%), Positives = 145/247 (58%), Gaps = 3/247 (1%)
 Frame = +1

Query: 172 ISQMPDDILVIILSHLSLKDAVATSLLSRQWRYLWTCISG-MNFDANAALD--KIAAEPK 342
           ISQ+P+D+L+ ILS L++K+A  TS+LS +WR+LWT  +G M+FDA+  +   ++    K
Sbjct: 35  ISQLPEDVLLNILSRLTMKEAARTSILSTRWRHLWTYYTGIMDFDASLTMWYLQLGLGSK 94

Query: 343 LRRVERPKYINWVNRVVGKHRGVTIDEFRICFDLDKSSKTAIDRWIKFAIGKRVQRLELD 522
              +ER  +++WVN+V+  H G T++  RICFDLD      ID WI  A+ KRV+RLE+D
Sbjct: 95  SLDMERHSFVSWVNQVLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKRVKRLEID 154

Query: 523 LLERGETLRQPSRNYAFPYKLLTQSKGSSSKRLCLNIPSMEPCTLIGLKFLKDLSLKCVN 702
           L     +++  + +YAFP  LL  S  SS K L LN+  +                    
Sbjct: 155 LTNIEPSIK-TTGSYAFPSGLLNDSSFSSLKTLQLNMVDV-------------------- 193

Query: 703 VGEKALGNILSNCPVLESLSMHGSGDLVNVRINSPSLMLRNLEIVFCLGIETIEICGTNL 882
            GE     +LS CP+LE LS+  S  LV+++++  SL L+ LE+V C  ++ +EI   +L
Sbjct: 194 TGEALQHLLLSWCPLLEVLSIVNSTSLVSLKVSGSSLKLKYLEMVCCNNLKYLEITAASL 253

Query: 883 VSFSYLG 903
           VSF Y G
Sbjct: 254 VSFKYYG 260


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score =  150 bits (380), Expect = 3e-34
 Identities = 96/256 (37%), Positives = 147/256 (57%), Gaps = 1/256 (0%)
 Frame = +1

Query: 139 ENEGDCKSEDWISQMPDDILVIILSHLSLKDAVATSLLSRQWRYLWTCISGMNFDANAAL 318
           ENE   +S D IS +P DILV ILS L LK+A  TS LS +WR LW+ I  +NFDA+  L
Sbjct: 36  ENERCDRSVDSISHLPQDILVFILSLLPLKEAARTSTLSHKWRCLWSFIPCLNFDAHKKL 95

Query: 319 DKIAAEPKLRRVERPKYINWVNRVVGKHRGVTIDEFRICFDLDKSSKTAIDRWIKFAIGK 498
             +    +  + ER +++ WVNRV+  ++G  ++  RI F+LD S +  +DRW++FA+  
Sbjct: 96  LDLQFTDENLKSERRQFVKWVNRVIDSYKGSNLETLRIRFNLDSSFQCDVDRWVQFAMQW 155

Query: 499 RVQRLELDLLERGET-LRQPSRNYAFPYKLLTQSKGSSSKRLCLNIPSMEPCTLIGLKFL 675
           +++  EL+L +  ++ +  P    +FP +L    K +  + +  N  S           L
Sbjct: 156 KLKMFELNLSDSYDSGIYSPC---SFP-QLSDGPKENFPRFMFSNSSS-----------L 200

Query: 676 KDLSLKCVNVGEKALGNILSNCPVLESLSMHGSGDLVNVRINSPSLMLRNLEIVFCLGIE 855
           K L L  VNVG +AL   L+N P+LE L +  S  L+++R+   SL LR LE+  C  +E
Sbjct: 201 KTLKLIAVNVGGEALECFLTNSPLLEILVVEYSHCLLSLRVVGASLKLRQLEVCMCNYLE 260

Query: 856 TIEICGTNLVSFSYLG 903
           ++E+   NL SF Y+G
Sbjct: 261 SLEVSAPNLESFKYVG 276


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 457

 Score =  142 bits (359), Expect = 8e-32
 Identities = 86/247 (34%), Positives = 136/247 (55%), Gaps = 2/247 (0%)
 Frame = +1

Query: 163 EDWISQMPDDILVIILSHLSLKDAVATSLLSRQWRYLWTCISGMNFD-ANAALDKIAAEP 339
           ED IS +P++IL  ILS L+ ++A  TS+LSR+WR LWT  S +NFD    AL K   + 
Sbjct: 18  EDRISHLPEEILTSILSFLTTEEASRTSVLSRRWRILWTLTSSLNFDCTKIALGKKLDDR 77

Query: 340 KLRRVERPKYINWVNRVVGKHRGVTIDEFRICFDLDKSSKTAIDRWIKFAIGKRVQRLEL 519
              R ER ++  WV RV+  ++   +DEF + FDL  +S+ ++D+W+ FA+ K ++RLE+
Sbjct: 78  FALRSERTRFAMWVKRVLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTLKRLEI 137

Query: 520 DLLE-RGETLRQPSRNYAFPYKLLTQSKGSSSKRLCLNIPSMEPCTLIGLKFLKDLSLKC 696
            L        R     Y+FP    +  +G              P  L  +  L+ L L+ 
Sbjct: 138 SLAPFSSRKFRFHDECYSFPVDCYSFIRG--------------PEGLSNISSLRSLCLRY 183

Query: 697 VNVGEKALGNILSNCPVLESLSMHGSGDLVNVRINSPSLMLRNLEIVFCLGIETIEICGT 876
           VN+  + + + L NCP+LE L++  +  L ++++ + SL L+ LEI  C  ++  EIC  
Sbjct: 184 VNMTGEVVEHFLLNCPLLEQLTVAVAYRLESLKVPASSLRLKYLEIFDCYHLKNFEICAP 243

Query: 877 NLVSFSY 897
           NLV+  Y
Sbjct: 244 NLVTILY 250


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  132 bits (331), Expect = 1e-28
 Identities = 92/271 (33%), Positives = 145/271 (53%), Gaps = 22/271 (8%)
 Frame = +1

Query: 157  KSEDWISQMPDDILVIILSHLSLKDAVATSLLSRQWRYLWTCISGMNFDANAAL------ 318
            + EDW+ ++PDDIL  I+S L LK+AV T +LS++WR +WTC S + FDA + L      
Sbjct: 1315 RGEDWLVELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCS 1374

Query: 319  -DKIAAEPKLR-RVERPKYINWVNR-VVGKHRGVTIDEFRICFDLDKSSKTAIDRWIKFA 489
                  +P+L  +++  K++  V++ +  + +G  I+ F I F L K   + ID+WI  A
Sbjct: 1375 XSMSGNQPELNSQMQSXKFVERVDQFMYYRSQGPKINSFSIHFPLGKEFMSHIDQWITCA 1434

Query: 490  IGKRVQRLELDL-------LERGETLRQPSRNYAFPYKLLTQSKGSSSKRLCLNIPSMEP 648
            + K V+ ++LDL       L+R +T     + Y FP +L +   G    R  L    +  
Sbjct: 1435 VMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGG----RCTLKHLRLAS 1490

Query: 649  CTLIGLKFLKDLS------LKCVNVGEKALGNILSNCPVLESLSMHGSGDLVNVRINSPS 810
            C L  L     L+      L+ VN+ ++ L ++LS C  LE LS+     LVN+  ++ +
Sbjct: 1491 CHLSALPSSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSLCVCNGLVNLSFSALN 1550

Query: 811  LMLRNLEIVFCLGIETIEICGTNLVSFSYLG 903
            L L+ L I  C  +ETIEI   +LV+F Y G
Sbjct: 1551 LQLKFLSIKNCFRLETIEIHAADLVTFKYGG 1581


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