BLASTX nr result

ID: Panax21_contig00022495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022495
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon...    75   7e-12
gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi...    75   7e-12
ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group] g...    75   7e-12
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...    74   9e-12
ref|XP_002329539.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12

>dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
           gi|222637078|gb|EEE67210.1| hypothetical protein
           OsJ_24327 [Oryza sativa Japonica Group]
          Length = 1277

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 313 EVEELWKTNPDAMLEDLKKPGVDDEPQLVALKYEDAYQ 200
           +VEELWKTNPDA LEDL+KPGVDDEPQ VALKYEDAYQ
Sbjct: 307 KVEELWKTNPDASLEDLEKPGVDDEPQQVALKYEDAYQ 344


>gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
          Length = 1277

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 313 EVEELWKTNPDAMLEDLKKPGVDDEPQLVALKYEDAYQ 200
           +VEELWKTNPDA LEDL+KPGVDDEPQ VALKYEDAYQ
Sbjct: 307 KVEELWKTNPDASLEDLEKPGVDDEPQQVALKYEDAYQ 344


>ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
           gi|113611234|dbj|BAF21612.1| Os07g0495900, partial
           [Oryza sativa Japonica Group]
          Length = 1121

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 313 EVEELWKTNPDAMLEDLKKPGVDDEPQLVALKYEDAYQ 200
           +VEELWKTNPDA LEDL+KPGVDDEPQ VALKYEDAYQ
Sbjct: 151 KVEELWKTNPDASLEDLEKPGVDDEPQQVALKYEDAYQ 188


>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
           gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
           protein, putative [Ricinus communis]
          Length = 1280

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -1

Query: 313 EVEELWKTNPDAMLEDLKKPGVDDEPQLVALKYEDAYQ 200
           +VEELWKTNPDA LEDL+KPG+DDEPQ VALKYEDAYQ
Sbjct: 290 KVEELWKTNPDATLEDLEKPGIDDEPQSVALKYEDAYQ 327


>ref|XP_002329539.1| predicted protein [Populus trichocarpa] gi|222870248|gb|EEF07379.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 313 EVEELWKTNPDAMLEDLKKPGVDDEPQLVALKYEDAYQ 200
           +VEELWKTNPDA LEDL+KPGVDDEPQ VALKYEDAYQ
Sbjct: 281 KVEELWKTNPDATLEDLEKPGVDDEPQPVALKYEDAYQ 318


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