BLASTX nr result

ID: Panax21_contig00022462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022462
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   357   2e-96
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   305   9e-81
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   305   9e-81
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...   288   1e-75

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  357 bits (915), Expect = 2e-96
 Identities = 190/287 (66%), Positives = 228/287 (79%), Gaps = 2/287 (0%)
 Frame = +2

Query: 2    GEGFKRLQLLIIELTRSGIFYPQAYVRQLIVSGIMDWEGSMADLDRSKRHYKILKQLPDP 181
            GEGFKRLQLLI+EL RSGIFYPQ YVRQLIVSGIMD  G + DLDR KRHY+ILKQLP  
Sbjct: 691  GEGFKRLQLLIMELARSGIFYPQVYVRQLIVSGIMDRYGPIVDLDRRKRHYRILKQLPGS 750

Query: 182  YICDALEEAQVIEVAVLAEAMHVYSNERRLVLHGLI-NKHRSINSANSLSQKQKKHLN-S 355
            Y+ DALE AQV EV +L++A+ +YSNERRLVL GL+ ++++S N A S+S ++ KHL  S
Sbjct: 751  YMRDALEGAQVTEVGLLSDAILIYSNERRLVLQGLLWDQYKSKNIA-SISSRRPKHLPVS 809

Query: 356  GRDSYTLSPVDQQKSVPSASSLSSGKNVNRVVQLEELKASISALLQLPNLSSTSADTGLD 535
             RD  + + VDQ +++ SAS++ SGK       +EELKA+IS LLQLPN S+TSADTGLD
Sbjct: 810  ARDGASPASVDQWRTLQSASNMLSGKTAKSNADIEELKAAISGLLQLPNSSTTSADTGLD 869

Query: 536  ESQGTVKRPIVSTGTRNDPGEGTPGCEECKRVKRLKLSEEKSFYLLGHSPNPSDDEDIWW 715
            ESQG+VK+ + S   + D  EGTPGCEEC+R KR KLSE++S Y  GHSPNPSDDED WW
Sbjct: 870  ESQGSVKKSVGSNCNKMDLVEGTPGCEECRRAKRQKLSEDRSSY-QGHSPNPSDDEDTWW 928

Query: 716  VRKGPKSLETFRVDPPIKPAKQASRGRQKNVRKTQSLAQLAATRIEG 856
            VRKGPKS E+F++DPP+K AKQ SRGRQK VRKTQSLAQLAA RIEG
Sbjct: 929  VRKGPKSSESFKIDPPLKAAKQTSRGRQKIVRKTQSLAQLAAARIEG 975


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  308 bits (789), Expect = 1e-81
 Identities = 172/286 (60%), Positives = 202/286 (70%), Gaps = 1/286 (0%)
 Frame = +2

Query: 2    GEGFKRLQLLIIELTRSGIFYPQAYVRQLIVSGIMDWEGSMADLDRSKRHYKILKQLPDP 181
            GEGFKRLQLLI+EL RSGIFYPQ YVRQLIVSGIMD  G + DLDR KRHY+ILKQLP  
Sbjct: 602  GEGFKRLQLLIMELARSGIFYPQVYVRQLIVSGIMDRYGPIVDLDRRKRHYRILKQLPGS 661

Query: 182  YICDALEEAQVIEVAVLAEAMHVYSNERRLVLHGLI-NKHRSINSANSLSQKQKKHLNSG 358
            Y+ DALE AQV EV +L++A+ +YSNERRLVL GL+ ++++S N A S+S ++ KHL   
Sbjct: 662  YMRDALEGAQVTEVGLLSDAILIYSNERRLVLQGLLWDQYKSKNIA-SISSRRPKHL--- 717

Query: 359  RDSYTLSPVDQQKSVPSASSLSSGKNVNRVVQLEELKASISALLQLPNLSSTSADTGLDE 538
                   PV  +     AS                          LPN S+TSADTGLDE
Sbjct: 718  -------PVSARDGASPAS--------------------------LPNSSTTSADTGLDE 744

Query: 539  SQGTVKRPIVSTGTRNDPGEGTPGCEECKRVKRLKLSEEKSFYLLGHSPNPSDDEDIWWV 718
            SQG+VK+ + S   + D  EGTPGCEEC+R KR KLSE++S Y  GHSPNPSDDED WWV
Sbjct: 745  SQGSVKKSVGSNCNKMDLVEGTPGCEECRRAKRQKLSEDRSSY-QGHSPNPSDDEDTWWV 803

Query: 719  RKGPKSLETFRVDPPIKPAKQASRGRQKNVRKTQSLAQLAATRIEG 856
            RKGPKS E+F++DPP+K AKQ SRGRQK VRKTQSLAQLAA RIEG
Sbjct: 804  RKGPKSSESFKIDPPLKAAKQTSRGRQKIVRKTQSLAQLAAARIEG 849


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score =  305 bits (781), Expect = 9e-81
 Identities = 168/285 (58%), Positives = 213/285 (74%), Gaps = 1/285 (0%)
 Frame = +2

Query: 5    EGFKRLQLLIIELTRSGIFYPQAYVRQLIVSGIMDWEGSMADLDRSKRHYKILKQLPDPY 184
            EG KRLQLLI+EL RSGIFYPQ+YVRQLI+SGIMD      +LDR KRHY+ILKQLP  +
Sbjct: 693  EGLKRLQLLIVELIRSGIFYPQSYVRQLIISGIMDANVPAVELDRRKRHYQILKQLPGLF 752

Query: 185  ICDALEEAQVIEVAVLAEAMHVYSNERRLVLHGLINKHRSINSANSLS-QKQKKHLNSGR 361
            I D LEEA++ E   L EAM +YSNERRL+L G++++    +  +++S QKQK H  S +
Sbjct: 753  IHDILEEARIAEGPELLEAMLIYSNERRLLLCGILSEQCQDSVKSNISVQKQKHHTTSIK 812

Query: 362  DSYTLSPVDQQKSVPSASSLSSGKNVNRVVQLEELKASISALLQLPNLSSTSADTGLDES 541
            DS + +  DQ +++ S S+L + K + R   ++ELK+SIS LLQLPNLSS S+DTGL+ES
Sbjct: 813  DSASSASFDQWRTIQSQSNLLT-KKIKRNADIKELKSSISLLLQLPNLSS-SSDTGLEES 870

Query: 542  QGTVKRPIVSTGTRNDPGEGTPGCEECKRVKRLKLSEEKSFYLLGHSPNPSDDEDIWWVR 721
            Q +VKR   S   + D  EGTPGCE+C+R KR KLSEE+S  L GHSP  SDD+D WW+R
Sbjct: 871  QSSVKRAAESISNKMDLFEGTPGCEDCRRAKRQKLSEERSSCLQGHSP-ISDDDDSWWMR 929

Query: 722  KGPKSLETFRVDPPIKPAKQASRGRQKNVRKTQSLAQLAATRIEG 856
            KG KSL++ +VD P+K +KQ S+GRQK VRKTQSLAQLAA RIEG
Sbjct: 930  KGTKSLDSSKVDVPLKSSKQVSKGRQKVVRKTQSLAQLAAARIEG 974


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  305 bits (781), Expect = 9e-81
 Identities = 169/286 (59%), Positives = 209/286 (73%), Gaps = 2/286 (0%)
 Frame = +2

Query: 5    EGFKRLQLLIIELTRSGIFYPQAYVRQLIVSGIMDWEGSMADLDRSKRHYKILKQLPDPY 184
            EG KRLQLLI+EL  SGIF PQ YVRQLI+SGIMD  G  ADLDR KRHY++LKQLP  +
Sbjct: 642  EGLKRLQLLIVELIHSGIFSPQVYVRQLIISGIMDAAGPPADLDRRKRHYRVLKQLPGRF 701

Query: 185  ICDALEEAQVIEVAVLAEAMHVYSNERRLVLHGLINKHRSINSANSLSQKQKKHLN--SG 358
            + D LE+A++ E + L+EAM +YSNERRL+LHGL  +    +  ++LS K+ KH    +G
Sbjct: 702  VHDVLEDARIAEGSELSEAMRIYSNERRLLLHGLFCERYQNSVKSNLSVKKPKHHPPIAG 761

Query: 359  RDSYTLSPVDQQKSVPSASSLSSGKNVNRVVQLEELKASISALLQLPNLSSTSADTGLDE 538
            +D  + S  +Q K+  S  S      V   + +EELKASISALLQLP + STS+DTGLDE
Sbjct: 762  KDGASPSSFEQWKNTQSRPS----AKVKNEMDIEELKASISALLQLP-ICSTSSDTGLDE 816

Query: 539  SQGTVKRPIVSTGTRNDPGEGTPGCEECKRVKRLKLSEEKSFYLLGHSPNPSDDEDIWWV 718
            SQG+VKRP  S G++ D  E TPGCE+C++ KR KLSEE++ YL GHSP  SDDED WWV
Sbjct: 817  SQGSVKRPAESIGSKMDVVE-TPGCEDCRKAKRQKLSEERNSYLQGHSP-ISDDEDTWWV 874

Query: 719  RKGPKSLETFRVDPPIKPAKQASRGRQKNVRKTQSLAQLAATRIEG 856
            RKG K L++ +VDPP K +KQ S+GRQK VRKTQSLA LAA RIEG
Sbjct: 875  RKGAKPLDSSKVDPPPKSSKQVSKGRQKVVRKTQSLAHLAAARIEG 920


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cucumis sativus]
          Length = 2254

 Score =  288 bits (736), Expect = 1e-75
 Identities = 150/286 (52%), Positives = 198/286 (69%), Gaps = 1/286 (0%)
 Frame = +2

Query: 2    GEGFKRLQLLIIELTRSGIFYPQAYVRQLIVSGIMDWEGSMADLDRSKRHYKILKQLPDP 181
            GEGFKR+QLLI+EL R+GIFYP +YVRQLIVSGIMD  G   D D+ +RH +IL  LP  
Sbjct: 688  GEGFKRIQLLIVELVRAGIFYPHSYVRQLIVSGIMDTNGPAVDSDKRRRHQQILMHLPGS 747

Query: 182  YICDALEEAQVIEVAVLAEAMHVYSNERRLVLHGLINKHRS-INSANSLSQKQKKHLNSG 358
            ++   L++ ++ + A L E ++VYS ERRLVLHGL+ +  S I+SAN  S +++K   S 
Sbjct: 748  FVRATLDDGKIAQGAQLVEVINVYSKERRLVLHGLVYEQLSDISSANISSNRKRKIPTSD 807

Query: 359  RDSYTLSPVDQQKSVPSASSLSSGKNVNRVVQLEELKASISALLQLPNLSSTSADTGLDE 538
            + S +++ V+Q KS+P  S+  S K +   V +E LK +IS LL+ PN SS   DTGLD+
Sbjct: 808  KVSSSVTSVNQLKSIPPFSNTGSTKRLKSEVDIEALKEAISLLLRFPNSSSLPTDTGLDD 867

Query: 539  SQGTVKRPIVSTGTRNDPGEGTPGCEECKRVKRLKLSEEKSFYLLGHSPNPSDDEDIWWV 718
              GT K+  VS   + D  E T GCE+CKR K+ K+S+E++ YL G SP PSDDED+WWV
Sbjct: 868  PSGTGKKSFVSVYAKVDTAEATHGCEDCKRAKKQKVSDERNLYLHGSSPIPSDDEDMWWV 927

Query: 719  RKGPKSLETFRVDPPIKPAKQASRGRQKNVRKTQSLAQLAATRIEG 856
            +KGPKS E  +VDPP+K  K  S+GR    RKTQSLA LAA+RIEG
Sbjct: 928  KKGPKSSEALKVDPPVKTTKPVSKGR----RKTQSLAHLAASRIEG 969


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