BLASTX nr result

ID: Panax21_contig00022459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022459
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
gb|ABK26521.1| unknown [Picea sitchensis]                             282   4e-74
gb|ADE76509.1| unknown [Picea sitchensis]                             276   2e-72
gb|ADE77588.1| unknown [Picea sitchensis]                             275   4e-72

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  402 bits (1033), Expect = e-110
 Identities = 183/221 (82%), Positives = 206/221 (93%)
 Frame = -3

Query: 663  GQFTEAMEFIKKIPFEPNAAIWGSLLGACRIHCNPDIAEYAAGYLFELEPESSGNYILLA 484
            GQF E +EFI+K+PFEPNAA+WGSLLGACRIHCNPD+AEYAA YLFELEP+SSGNY+L+A
Sbjct: 508  GQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMA 567

Query: 483  NIYAAVGRWEDAAKVRCLMKERGVTKPPGCSWIEVERKVSSFIVGDTKHPLMDKISAKMK 304
            NIY+A GRWEDAAK+RCLMKERGVTKPPGCSWIEV+RK+ SF+VGDT HPLM++ISAKM+
Sbjct: 568  NIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKME 627

Query: 303  SLYLDIKEIGYVPDTRFVLQDVGEAEKEFSLCGHSEKLALAFGLITTQSGAPLRIFKNLR 124
            SLY DIKEIGYVPDT FVLQDV E EKEFSLCGHSEK+ALAFGLI+T +G PLRI KNLR
Sbjct: 628  SLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLR 687

Query: 123  ICGDCHSAIKYISMVEKREIIMRDNYRFHHFVNGVCSCGDY 1
            +CGDCHSA K+IS VEKR+IIMRDNYRFHHFV+GVCSCGDY
Sbjct: 688  VCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDY 728


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  402 bits (1033), Expect = e-110
 Identities = 183/221 (82%), Positives = 206/221 (93%)
 Frame = -3

Query: 663  GQFTEAMEFIKKIPFEPNAAIWGSLLGACRIHCNPDIAEYAAGYLFELEPESSGNYILLA 484
            GQF E +EFI+K+PFEPNAA+WGSLLGACRIHCNPD+AEYAA YLFELEP+SSGNY+L+A
Sbjct: 751  GQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMA 810

Query: 483  NIYAAVGRWEDAAKVRCLMKERGVTKPPGCSWIEVERKVSSFIVGDTKHPLMDKISAKMK 304
            NIY+A GRWEDAAK+RCLMKERGVTKPPGCSWIEV+RK+ SF+VGDT HPLM++ISAKM+
Sbjct: 811  NIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKME 870

Query: 303  SLYLDIKEIGYVPDTRFVLQDVGEAEKEFSLCGHSEKLALAFGLITTQSGAPLRIFKNLR 124
            SLY DIKEIGYVPDT FVLQDV E EKEFSLCGHSEK+ALAFGLI+T +G PLRI KNLR
Sbjct: 871  SLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLR 930

Query: 123  ICGDCHSAIKYISMVEKREIIMRDNYRFHHFVNGVCSCGDY 1
            +CGDCHSA K+IS VEKR+IIMRDNYRFHHFV+GVCSCGDY
Sbjct: 931  VCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDY 971


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  282 bits (722), Expect = 4e-74
 Identities = 128/221 (57%), Positives = 168/221 (76%)
 Frame = -3

Query: 663 GQFTEAMEFIKKIPFEPNAAIWGSLLGACRIHCNPDIAEYAAGYLFELEPESSGNYILLA 484
           G   EA+ FI ++P EPNA++WGSLLGACR+H N ++AE A   L EL PE+ G Y+LL+
Sbjct: 149 GCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLS 208

Query: 483 NIYAAVGRWEDAAKVRCLMKERGVTKPPGCSWIEVERKVSSFIVGDTKHPLMDKISAKMK 304
           NIYAA GRW+DA KVR +MK+R V K PGCSWIEV+ KV  FIVGD+ HP +++I   ++
Sbjct: 209 NIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLE 268

Query: 303 SLYLDIKEIGYVPDTRFVLQDVGEAEKEFSLCGHSEKLALAFGLITTQSGAPLRIFKNLR 124
           +L L +K  GY+P+T FVL DV E +KE+ L  HSEKLA+AFG+I+T  G  +R+ KNLR
Sbjct: 269 TLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLR 328

Query: 123 ICGDCHSAIKYISMVEKREIIMRDNYRFHHFVNGVCSCGDY 1
           +CGDCH+A K+IS +  REI++RD +RFHHF +G CSCGDY
Sbjct: 329 VCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDY 369


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score =  276 bits (707), Expect = 2e-72
 Identities = 128/221 (57%), Positives = 169/221 (76%)
 Frame = -3

Query: 663 GQFTEAMEFIKKIPFEPNAAIWGSLLGACRIHCNPDIAEYAAGYLFELEPESSGNYILLA 484
           G+  EA +F+K IPF P+A +WG+LLGACR++ N D+ ++AA  LF+LEP ++  Y+LL+
Sbjct: 25  GRLDEARDFMKTIPFAPDANVWGALLGACRMYGNIDLGKHAAECLFQLEPHNAAKYVLLS 84

Query: 483 NIYAAVGRWEDAAKVRCLMKERGVTKPPGCSWIEVERKVSSFIVGDTKHPLMDKISAKMK 304
           NIYAA GRW+D AKVR +MK+RGV K PGCSWIEV+ KV +F+V D  HP  ++I + ++
Sbjct: 85  NIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLE 144

Query: 303 SLYLDIKEIGYVPDTRFVLQDVGEAEKEFSLCGHSEKLALAFGLITTQSGAPLRIFKNLR 124
            L   ++  GYVPDT FVL DV   +KE SL  HSEKLA+AFGLI+T  G P+RI KNLR
Sbjct: 145 ELARQMEAAGYVPDTNFVLHDVEMEQKEHSLYHHSEKLAIAFGLISTLPGLPVRIIKNLR 204

Query: 123 ICGDCHSAIKYISMVEKREIIMRDNYRFHHFVNGVCSCGDY 1
           +CGDCH+A K+IS + +REII+RD  RFHHF +G+CSCGDY
Sbjct: 205 VCGDCHTATKFISKIVEREIIIRDANRFHHFKDGLCSCGDY 245


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  275 bits (704), Expect = 4e-72
 Identities = 129/221 (58%), Positives = 165/221 (74%)
 Frame = -3

Query: 663 GQFTEAMEFIKKIPFEPNAAIWGSLLGACRIHCNPDIAEYAAGYLFELEPESSGNYILLA 484
           G   EA +FI+K+P EP A++WG+ LG+CRIHCN ++ E  A  L  L+P+++G Y+LL+
Sbjct: 91  GHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLS 150

Query: 483 NIYAAVGRWEDAAKVRCLMKERGVTKPPGCSWIEVERKVSSFIVGDTKHPLMDKISAKMK 304
           NIYAA GRW+D AKVR +MKE+ V K PGCS IEV  K+ SF+VGD  HP  + I A ++
Sbjct: 151 NIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLE 210

Query: 303 SLYLDIKEIGYVPDTRFVLQDVGEAEKEFSLCGHSEKLALAFGLITTQSGAPLRIFKNLR 124
           +L   ++ +GYVP T FVL DV E  KE  L  HSEKLA+AFGLI+T+SG  +RI KNLR
Sbjct: 211 TLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIRITKNLR 270

Query: 123 ICGDCHSAIKYISMVEKREIIMRDNYRFHHFVNGVCSCGDY 1
           +CGDCHSA K+IS + KREIIMRD  RFHHF +G+CSCGDY
Sbjct: 271 VCGDCHSATKFISKIVKREIIMRDLNRFHHFKDGLCSCGDY 311


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