BLASTX nr result

ID: Panax21_contig00022456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022456
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|2...   189   9e-46
ref|XP_002303594.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
ref|XP_002509813.1| hypothetical protein RCOM_1687010 [Ricinus c...   155   2e-35

>ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|222846785|gb|EEE84332.1|
            predicted protein [Populus trichocarpa]
          Length = 658

 Score =  189 bits (481), Expect = 9e-46
 Identities = 117/326 (35%), Positives = 178/326 (54%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1102 GSMKEGSNKKRKCSTQDPVSLDDLKIFTESLLQDLKVERENMFARMREDMRKLVAVKSIK 923
            G   EG  K  K +     SL      + +++     E+E      RE+ R  ++ K   
Sbjct: 262  GGSTEGFGKANKSTDSSNCSLTLDSHISRAIVPMTTTEKE------REE-RMALSAKMNS 314

Query: 922  NPTRKRGRCMSKTGKAWNQKSAESGMKTQNFNDGPIERSIISSRTTDSNNCCKALEEQIN 743
             P+        K  +    KS   G++ Q  N G +ERS    + TDSNN  +A E Q +
Sbjct: 315  KPSPS-----DKNVQVQKPKSIVLGIRAQ-CNGGSLERSAKGRKITDSNNHHQAPEHQSD 368

Query: 742  HDQAVQTIRSNEKDNGENLRLSANKSVYSTNDSDQLVSSSYLTLPYVLSEPQLEQHRIDS 563
            + QA+ ++ S +K+ GE L L+  + ++ T  S+Q+ SS YLTLP VL++P    HR D+
Sbjct: 369  YAQAIGSMTSGKKNKGERLALTV-EPMFPTGSSNQVASSMYLTLPTVLTKPLEANHRFDT 427

Query: 562  SSRKCIQPGVAGNDTSLNFERENLMMDANNHHGYFSGIQAEEPYSSFAQMGSKSVSGYDQ 383
            SS   IQP  AGN   ++ ER NL++ +++HHGYF G+Q +E   SFAQM S+ VS ++Q
Sbjct: 428  SSLNSIQPRFAGNQIGMSSERSNLILGSSSHHGYFQGMQPDERSRSFAQMSSRDVSYFNQ 487

Query: 382  HNTQISNMGSGFPISLHQWLDNMSNIPSQTVLENSSRGNNIPGLRMNGRGIRFSGNSHAL 203
            ++T  S +G+G P+   Q  ++  NIP+Q  LEN +R  + PGL MNG  +R  G S++ 
Sbjct: 488  NSTMSSIVGNGLPVPFLQAANSSFNIPTQVSLENLARETSTPGLNMNGGAVRLPGGSYSF 547

Query: 202  SDNFAVNN--FHSHPTYKTNGELAGF 131
            S+    NN  F  H +YK +G L  +
Sbjct: 548  SEQLIANNFLFLDHSSYKADGRLTSY 573



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 91/379 (24%), Positives = 145/379 (38%), Gaps = 53/379 (13%)
 Frame = -2

Query: 1177 ETGKVSYKGVRSRRKRRGTKSDTKTGSMKEGSNKKRKCSTQDPVSLDDLKIFTESLLQDL 998
            ++GK      R  +K   T ++ K G  +E   KK K ST +    DDLK +   LLQDL
Sbjct: 73   KSGKAENGRRRRSKKNDSTPNEKKKGPHREVRRKKSKPSTDEQAVFDDLKKYMNFLLQDL 132

Query: 997  KVERENMFARMREDMRKLVAVKSIKNPTRKRGRCMSKTGKAWNQKSAESGMKTQN----- 833
            KV REN+   MRE+M+KLV  +++     + G    +  +   Q S E   + Q+     
Sbjct: 133  KVSRENLLKWMREEMQKLVEEETVSELETREGSFRGEKVQLQLQTSFEENAQVQHQNTFG 192

Query: 832  ---------------------FNDGPIERSIISSRTTDSN-NCCKALEEQI--NHDQAVQ 725
                                 F +    +++I+ +   +  +  K  +E I   H  A  
Sbjct: 193  NMPAQHQNNIQGYGQAQPHNKFAENVHRQNLINFQENSTEVHHQKNFQENIFLQHRNAFS 252

Query: 724  TIRSNEKDNGENLR--LSANKSVYSTNDSDQLVSS-SYLTLPYVLSEPQLEQH------- 575
              + ++  NG +      ANKS  S+N S  L S  S   +P   +E + E+        
Sbjct: 253  LCKGSQDCNGGSTEGFGKANKSTDSSNCSLTLDSHISRAIVPMTTTEKEREERMALSAKM 312

Query: 574  ---------RIDSSSRKCIQPGVAGNDTSLNFERE---NLMMDANNHHGYFSGIQAEEPY 431
                      +     K I  G+       + ER      + D+NNHH      QA E  
Sbjct: 313  NSKPSPSDKNVQVQKPKSIVLGIRAQCNGGSLERSAKGRKITDSNNHH------QAPEHQ 366

Query: 430  SSFAQMGSKSVSGYDQHNTQIS-NMGSGFPISLHQWLDNMSNIPSQTVLENSSRGNN-IP 257
            S +AQ      SG      +++  +   FP      + +   +   TVL      N+   
Sbjct: 367  SDYAQAIGSMTSGKKNKGERLALTVEPMFPTGSSNQVASSMYLTLPTVLTKPLEANHRFD 426

Query: 256  GLRMNGRGIRFSGNSHALS 200
               +N    RF+GN   +S
Sbjct: 427  TSSLNSIQPRFAGNQIGMS 445


>ref|XP_002303594.1| predicted protein [Populus trichocarpa] gi|222841026|gb|EEE78573.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  166 bits (419), Expect = 1e-38
 Identities = 93/240 (38%), Positives = 147/240 (61%)
 Frame = -2

Query: 850  GMKTQNFNDGPIERSIISSRTTDSNNCCKALEEQINHDQAVQTIRSNEKDNGENLRLSAN 671
            G++ Q+ N+   ERS    +T+DSN   +  E Q +  Q + ++ S E+D GE L LS  
Sbjct: 332  GIRAQS-NNKSSERSAKGRKTSDSNRHHQVPEHQSDCAQVIGSLTSTERDKGERLPLSV- 389

Query: 670  KSVYSTNDSDQLVSSSYLTLPYVLSEPQLEQHRIDSSSRKCIQPGVAGNDTSLNFERENL 491
            + ++  N S+Q+ SS YLTLP VL++P +  HR D+SS   IQP +AGN   L+ ER NL
Sbjct: 390  QPMFPAN-SNQVASSMYLTLPTVLTKPHVANHRFDTSSLNSIQPRLAGNQIGLSSERPNL 448

Query: 490  MMDANNHHGYFSGIQAEEPYSSFAQMGSKSVSGYDQHNTQISNMGSGFPISLHQWLDNMS 311
            ++ +++ HGYF  +Q EE   +FAQ+ S+ +S ++Q++T  S  G+G P    Q +++  
Sbjct: 449  LLGSSSLHGYFQDMQPEERSRNFAQVSSRDISYFNQNSTS-SIFGNGLPDPFLQAVNSNF 507

Query: 310  NIPSQTVLENSSRGNNIPGLRMNGRGIRFSGNSHALSDNFAVNNFHSHPTYKTNGELAGF 131
            NIP+Q  LEN +R +++P L M G   R  G S++ S+ F  +NF +H +YK +G L  +
Sbjct: 508  NIPTQVSLENLARESSMPSLSMRGGATRLPGGSYSFSEQFTASNFLNHSSYKVDGRLMAY 567



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
 Frame = -2

Query: 1162 SYKGVRSRRKRRGTKSDTKTGSMKEGSNK-----KRKCSTQDPVSLDDLKIFTESLLQDL 998
            S K    RR+R+  + D+    +K+G  K     K K  T +     DLK +   LL+DL
Sbjct: 74   SGKAENGRRRRKSKRDDSAPNEIKKGPRKGVRRKKSKTITDEQAVFYDLKKYMNFLLEDL 133

Query: 997  KVERENMFARMREDMRKLVAVKSIKNPTRKRGRCMSKTGKAWNQKSAESGMKTQNFN 827
            KV REN+   MRE+M+KLVA +++     +      +  +  NQ + E   + Q+ N
Sbjct: 134  KVSRENLLKWMREEMQKLVAEETVSELETRERSFRGEKVQLQNQANFEENAEVQHRN 190


>ref|XP_002509813.1| hypothetical protein RCOM_1687010 [Ricinus communis]
            gi|223549712|gb|EEF51200.1| hypothetical protein
            RCOM_1687010 [Ricinus communis]
          Length = 584

 Score =  155 bits (392), Expect = 2e-35
 Identities = 114/340 (33%), Positives = 173/340 (50%), Gaps = 4/340 (1%)
 Frame = -2

Query: 1147 RSRRKRRGTKSDTKTG--SMKEGSNKKRKCSTQDPVSLDDLKIFTESLLQDLKVERENMF 974
            R  + R GT   +  G  S +   NKK   S   PV L+D   ++ +++     E     
Sbjct: 249  RHNKIRTGTGGRSCNGGPSQRYSRNKKLADSNNTPV-LEDQADYSRAIVLLTPTEGNG-- 305

Query: 973  ARMREDMRKLVAVKSIKNPTRKRGRCMSKTGKAWNQKSAESGMKTQNFNDGPIERSIISS 794
                ED R  +  KSI     K G   S   +A  QKS   G++ QN N G   +S    
Sbjct: 306  ----ED-RLALPDKSIS----KFGPSDSNL-QAQQQKSIVLGIRAQNCNGGSPVKSAKGK 355

Query: 793  RTTDSNNCCKALEEQINHDQAVQTIRSNEKDNGENLRLSANKSVYSTNDSDQLVSSSYLT 614
            R   SN+ C+   +Q++  Q +  I    KD GE  RL    + +S+N  +Q  SS YLT
Sbjct: 356  RAAKSNDHCQVPNDQVDFSQGIGFIAPTGKDKGERSRLYMEPN-FSSNSFNQTASSMYLT 414

Query: 613  LPYVLSEPQLEQHRIDSSSRKCIQPGVAGNDTSLNFERENLMMDANNHHGYF-SGIQAEE 437
            LP VL+ P ++ HR D+SS    QP +  N   +N E+ + ++ ++++ GY+ S +Q E+
Sbjct: 415  LPTVLANPHIQNHRPDTSSINYFQPRIPQNQAGINAEKSDPILGSSSYLGYYQSMLQPED 474

Query: 436  PYSSFAQMGSKSVSGYDQHNTQISNMGSGFPISLHQWLDNMSNIPSQTVLENSSRGN-NI 260
               +++QM    +S ++Q+ T  S +G G  + L Q +    NIP+Q  LE+  R N N 
Sbjct: 475  RSRNYSQMSYSDISSFNQNGTTTSFVGHGVTVPL-QAVSGGFNIPNQFDLESLPRKNSNT 533

Query: 259  PGLRMNGRGIRFSGNSHALSDNFAVNNFHSHPTYKTNGEL 140
             GL MNG  IRFSG  ++L + +  NNFHSH  Y+ +G L
Sbjct: 534  LGLSMNGGAIRFSGEGYSLPEPYIANNFHSHSNYRADGRL 573



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
 Frame = -2

Query: 1156 KGVRSRRKRRGTKSDTKTGSMKEGSNKKR---KCSTQDPVSLDDLKIFTESLLQDLKVER 986
            +G R R K      + K    ++G+ +K+   K S  +  +LDDLK +  SLL++LKV R
Sbjct: 79   EGKRGRSKNVNLAPNKKKRRTRKGAARKKGKTKTSVDEHAALDDLKNYMNSLLEELKVTR 138

Query: 985  ENMFARMREDMRKLVAVKSIKNPTRKRGRCMSKTGKAWNQKSAESGMKTQ---------- 836
            +N+ + M+E+M KLV  +      RK G    +  +   Q ++E   + Q          
Sbjct: 139  KNLVSWMKEEMAKLVEEEKASESERKEGSFRGEENQLKYQNNSEENARVQYQNLFGKNIQ 198

Query: 835  -----NFND-------GPIERSIISSRTTDSNNCCKALEEQINHDQAVQTIRSNE----- 707
                 NF D          E+++ + +  +     + L+ Q N  + VQ  R N+     
Sbjct: 199  VQHQNNFEDYSQLHHQSKFEKNVQTQQIINLEENIE-LQPQKNCKEKVQVQRHNKIRTGT 257

Query: 706  ----KDNGENLRLSANKSVYSTNDSDQLVSSSYLTLPYVLSEP 590
                 + G + R S NK +  +N++  L   +  +   VL  P
Sbjct: 258  GGRSCNGGPSQRYSRNKKLADSNNTPVLEDQADYSRAIVLLTP 300


Top