BLASTX nr result

ID: Panax21_contig00022455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022455
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-24
ref|XP_002303594.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002509813.1| hypothetical protein RCOM_1687010 [Ricinus c...    87   3e-15

>ref|XP_002299527.1| predicted protein [Populus trichocarpa] gi|222846785|gb|EEE84332.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  116 bits (290), Expect = 4e-24
 Identities = 66/165 (40%), Positives = 99/165 (60%), Gaps = 6/165 (3%)
 Frame = +3

Query: 150 CNGGALEKSIISSRKTQ--NCSKVLEEGVKYDQAIQTIRSNEKDKGQSLRLLAKKSMYSS 323
           CNGG+LE+S    + T   N  +  E    Y QAI ++ S +K+KG+ L L  +  M+ +
Sbjct: 339 CNGGSLERSAKGRKITDSNNHHQAPEHQSDYAQAIGSMTSGKKNKGERLALTVEP-MFPT 397

Query: 324 TPSDQIGSSSYLTLPSVISERQVEQQRIESSSRNCIKPGVARNDTGATFERENLVINSIN 503
             S+Q+ SS YLTLP+V+++      R ++SS N I+P  A N  G + ER NL++ S +
Sbjct: 398 GSSNQVASSMYLTLPTVLTKPLEANHRFDTSSLNSIQPRFAGNQIGMSSERSNLILGSSS 457

Query: 504 HHGYFSGIQAKESFGSLAQMGSKNMSCYDQTSSM----GTGFPIP 626
           HHGYF G+Q  E   S AQM S+++S ++Q S+M    G G P+P
Sbjct: 458 HHGYFQGMQPDERSRSFAQMSSRDVSYFNQNSTMSSIVGNGLPVP 502


>ref|XP_002303594.1| predicted protein [Populus trichocarpa] gi|222841026|gb|EEE78573.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
 Frame = +3

Query: 153 NGGALEKSIISSRKTQNCSK---VLEEGVKYDQAIQTIRSNEKDKGQSLRLLAKKSMYSS 323
           N  + E+S    RKT + ++   V E      Q I ++ S E+DKG+ L L  +    ++
Sbjct: 338 NNKSSERSA-KGRKTSDSNRHHQVPEHQSDCAQVIGSLTSTERDKGERLPLSVQPMFPAN 396

Query: 324 TPSDQIGSSSYLTLPSVISERQVEQQRIESSSRNCIKPGVARNDTGATFERENLVINSIN 503
             S+Q+ SS YLTLP+V+++  V   R ++SS N I+P +A N  G + ER NL++ S +
Sbjct: 397 --SNQVASSMYLTLPTVLTKPHVANHRFDTSSLNSIQPRLAGNQIGLSSERPNLLLGSSS 454

Query: 504 HHGYFSGIQAKESFGSLAQMGSKNMSCYDQTSS---MGTGFPIP 626
            HGYF  +Q +E   + AQ+ S+++S ++Q S+    G G P P
Sbjct: 455 LHGYFQDMQPEERSRNFAQVSSRDISYFNQNSTSSIFGNGLPDP 498


>ref|XP_002509813.1| hypothetical protein RCOM_1687010 [Ricinus communis]
           gi|223549712|gb|EEF51200.1| hypothetical protein
           RCOM_1687010 [Ricinus communis]
          Length = 584

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 7/182 (3%)
 Frame = +3

Query: 102 QARQQKRTNSDMKTLLCNGGALEKSIISSR--KTQNCSKVLEEGVKYDQAIQTIRSNEKD 275
           QA+QQK     ++   CNGG+  KS    R  K+ +  +V  + V + Q I  I    KD
Sbjct: 327 QAQQQKSIVLGIRAQNCNGGSPVKSAKGKRAAKSNDHCQVPNDQVDFSQGIGFIAPTGKD 386

Query: 276 KGQSLRLLAKKSMYSSTPSDQIGSSSYLTLPSVISERQVEQQRIESSSRNCIKPGVARND 455
           KG+  RL  + + +SS   +Q  SS YLTLP+V++   ++  R ++SS N  +P + +N 
Sbjct: 387 KGERSRLYMEPN-FSSNSFNQTASSMYLTLPTVLANPHIQNHRPDTSSINYFQPRIPQNQ 445

Query: 456 TGATFERENLVINSINHHGYF-SGIQAKESFGSLAQMGSKNMSCYDQ----TSSMGTGFP 620
            G   E+ + ++ S ++ GY+ S +Q ++   + +QM   ++S ++Q    TS +G G  
Sbjct: 446 AGINAEKSDPILGSSSYLGYYQSMLQPEDRSRNYSQMSYSDISSFNQNGTTTSFVGHGVT 505

Query: 621 IP 626
           +P
Sbjct: 506 VP 507


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