BLASTX nr result
ID: Panax21_contig00022442
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022442 (484 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 107 1e-21 ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 103 1e-20 emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] 103 1e-20 ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 107 bits (266), Expect = 1e-21 Identities = 60/115 (52%), Positives = 69/115 (60%), Gaps = 3/115 (2%) Frame = -3 Query: 482 GETSHDKGVRSNATASREKEQGSERDWLGNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303 GE +H+KG RS+A ASREKE+ SERDW GN Sbjct: 529 GEVNHEKGARSSA-ASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKE 587 Query: 302 D---PLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 147 Q+ERD GYED+WDRGQ+SSRS SRSR +PEE +RSR RDADYGKRRRLP Sbjct: 588 SYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLP 642 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 103 bits (258), Expect = 1e-20 Identities = 58/112 (51%), Positives = 66/112 (58%) Frame = -3 Query: 482 GETSHDKGVRSNATASREKEQGSERDWLGNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303 GE +H+K RSN TASREKE+GSERDW GN Sbjct: 535 GEVNHEKVGRSN-TASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 593 Query: 302 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 147 D Q+ERD ED+WDRGQ+SSRS SRSR + +E HRSR RD DYGKRRRLP Sbjct: 594 DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLP 645 >emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] Length = 168 Score = 103 bits (258), Expect = 1e-20 Identities = 58/112 (51%), Positives = 66/112 (58%) Frame = -3 Query: 482 GETSHDKGVRSNATASREKEQGSERDWLGNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303 GE +H+K RSN TASREKE+GSERDW GN Sbjct: 56 GEVNHEKVGRSN-TASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 114 Query: 302 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 147 D Q+ERD ED+WDRGQ+SSRS SRSR + +E HRSR RD DYGKRRRLP Sbjct: 115 DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLP 166 >ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| predicted protein [Populus trichocarpa] Length = 619 Score = 102 bits (253), Expect = 4e-20 Identities = 56/112 (50%), Positives = 65/112 (58%) Frame = -3 Query: 482 GETSHDKGVRSNATASREKEQGSERDWLGNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303 GE +H+KG RS+ ASREKE+GSERDW GN Sbjct: 507 GEGNHEKGARSSG-ASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYR 565 Query: 302 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 147 Q+ERD GYED+ DRG +SSR+ SRSR PEE +RSR RD DYGKRRRLP Sbjct: 566 GHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLP 617 >ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa] Length = 573 Score = 95.5 bits (236), Expect = 4e-18 Identities = 54/112 (48%), Positives = 63/112 (56%) Frame = -3 Query: 482 GETSHDKGVRSNATASREKEQGSERDWLGNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303 GE +H+KG RS+ ASREKE+ SERDW GN Sbjct: 461 GEGNHEKGARSSG-ASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYR 519 Query: 302 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 147 Q+ERD GYED+ DRG +SSR+ SRSR PEE +RSR RD DYGKRRR P Sbjct: 520 GHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPP 571