BLASTX nr result
ID: Panax21_contig00022441
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022441 (499 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 121 7e-26 ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 119 3e-25 emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] 119 3e-25 ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 121 bits (303), Expect = 7e-26 Identities = 65/115 (56%), Positives = 75/115 (65%), Gaps = 3/115 (2%) Frame = +3 Query: 3 GETSHDKGVRSNATASREKEQGSERDWSGNFXXXXXXXXXXXXXXXXXXXXXXXX---KD 173 GE +H+KG RS+A ASREKE+ SERDWSGN K+ Sbjct: 529 GEVNHEKGARSSA-ASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKE 587 Query: 174 DYRDPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 338 YRD Q+ERD GYED+WDRGQ+SSRS SRSR +PEE +RSR RDADYGKRRRLP Sbjct: 588 SYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLP 642 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 119 bits (298), Expect = 3e-25 Identities = 63/112 (56%), Positives = 71/112 (63%) Frame = +3 Query: 3 GETSHDKGVRSNATASREKEQGSERDWSGNFXXXXXXXXXXXXXXXXXXXXXXXXKDDYR 182 GE +H+K RSN TASREKE+GSERDWSGN KD YR Sbjct: 535 GEVNHEKVGRSN-TASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 593 Query: 183 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 338 D Q+ERD ED+WDRGQ+SSRS SRSR + +E HRSR RD DYGKRRRLP Sbjct: 594 DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLP 645 >emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] Length = 168 Score = 119 bits (298), Expect = 3e-25 Identities = 63/112 (56%), Positives = 71/112 (63%) Frame = +3 Query: 3 GETSHDKGVRSNATASREKEQGSERDWSGNFXXXXXXXXXXXXXXXXXXXXXXXXKDDYR 182 GE +H+K RSN TASREKE+GSERDWSGN KD YR Sbjct: 56 GEVNHEKVGRSN-TASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 114 Query: 183 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 338 D Q+ERD ED+WDRGQ+SSRS SRSR + +E HRSR RD DYGKRRRLP Sbjct: 115 DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLP 166 >ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| predicted protein [Populus trichocarpa] Length = 619 Score = 115 bits (287), Expect = 5e-24 Identities = 61/112 (54%), Positives = 70/112 (62%) Frame = +3 Query: 3 GETSHDKGVRSNATASREKEQGSERDWSGNFXXXXXXXXXXXXXXXXXXXXXXXXKDDYR 182 GE +H+KG RS+ ASREKE+GSERDWSGN KD YR Sbjct: 507 GEGNHEKGARSSG-ASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYR 565 Query: 183 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 338 Q+ERD GYED+ DRG +SSR+ SRSR PEE +RSR RD DYGKRRRLP Sbjct: 566 GHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLP 617 >ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa] Length = 573 Score = 108 bits (269), Expect = 6e-22 Identities = 59/112 (52%), Positives = 68/112 (60%) Frame = +3 Query: 3 GETSHDKGVRSNATASREKEQGSERDWSGNFXXXXXXXXXXXXXXXXXXXXXXXXKDDYR 182 GE +H+KG RS+ ASREKE+ SERDWSGN KD YR Sbjct: 461 GEGNHEKGARSSG-ASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYR 519 Query: 183 DPLQKERDLGYEDNWDRGQASSRSHSRSRVMPEEGHRSRLRDADYGKRRRLP 338 Q+ERD GYED+ DRG +SSR+ SRSR PEE +RSR RD DYGKRRR P Sbjct: 520 GHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPP 571