BLASTX nr result

ID: Panax21_contig00022435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022435
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21718.3| unnamed protein product [Vitis vinifera]               75   7e-12
emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]    73   2e-11
ref|XP_002266418.2| PREDICTED: putative disease resistance prote...    73   3e-11
emb|CBI21706.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_003634798.1| PREDICTED: putative disease resistance prote...    70   1e-10

>emb|CBI21718.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/121 (38%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   RKVRDFIFRSKNSILYRFKMSHKIKNINISLDKIYKWAQEIGLRAVEHLNATVQRSEIRH 181
           R+V DF F S+N + +RFKMSH++ +IN  LD I K    + L   E +   V+ S  R 
Sbjct: 96  RQVSDF-FSSENQVAFRFKMSHRLNDINERLDAIEKKIPMLNLTRREAIRIGVENSW-RE 153

Query: 182 TPPSIDKTQIVGRDDDISRVVKLLCENNEKDLSVIAXXXXXXXXKTTLARLVYKSDEVMS 361
           T      ++IVGR+++   +++ L  NNE+ LSV+A        KTTL +LVY  + V  
Sbjct: 154 THSFSLPSEIVGREENKEEIIRKLSSNNEEILSVVAIVGFGGLGKTTLTQLVYNDERVEH 213

Query: 362 F 364
           F
Sbjct: 214 F 214


>emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]
          Length = 1109

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   RKVRDFIFRSKNSILYRFKMSHKIKNINISLDKIYKWAQEIGLRAVEHLNATVQRSEIRH 181
           R+VRDF F S N + +RFKM H+I +    LD I     +         N  V+ S  R 
Sbjct: 95  RQVRDF-FSSSNQVAFRFKMGHRIADFRGRLDDIANDISKFNFIPRVTTNMRVENSG-RE 152

Query: 182 TPPSIDKTQIVGRDDDISRVVKLLCE-NNEKDLSVIAXXXXXXXXKTTLARLVYKSDEVM 358
           T   +  ++I+GRD+D  +++KLL + NNE++LSV+A        KTT+A+LVY  ++V+
Sbjct: 153 THSFVLTSEIMGRDEDKKKIIKLLLQSNNEENLSVVAIVGIGGLGKTTVAQLVYNDEDVV 212


>ref|XP_002266418.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1177

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/112 (36%), Positives = 64/112 (57%)
 Frame = +2

Query: 23  FRSKNSILYRFKMSHKIKNINISLDKIYKWAQEIGLRAVEHLNATVQRSEIRHTPPSIDK 202
           F S N +++R KMSH++K+I   L  I      + L    H   T +++  R T   +  
Sbjct: 101 FSSSNQVVFRCKMSHRLKDIKERLGDIQNDISLLNLIPCVH---TEEKNSWRDTHSFVLA 157

Query: 203 TQIVGRDDDISRVVKLLCENNEKDLSVIAXXXXXXXXKTTLARLVYKSDEVM 358
           ++IVGRD++   +VKLL  NNEK+LS++A        KTTLA+LVY  + ++
Sbjct: 158 SEIVGRDENKEEIVKLLSSNNEKNLSIVAIVGIGGLGKTTLAQLVYNDERLV 209


>emb|CBI21706.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/121 (33%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   RKVRDFIFRSKNSILYRFKMSHKIKNINISLDKIYKWAQEIGLRAVEHLNATVQRSEIRH 181
           R+V DF F S+N + +RFKMSH++++I   LD +      + L   + +  T + +  R 
Sbjct: 97  RQVSDF-FSSENQVAFRFKMSHRLEDIKERLDDVANDIPMLNLIPRDIVLHTREENSGRE 155

Query: 182 TPPSIDKTQIVGRDDDISRVVKLLCENNEKDLSVIAXXXXXXXXKTTLARLVYKSDEVMS 361
           T   +  ++IVGR+++   +++ L  NNE+ LSV+A        KTTL +LVY  + V  
Sbjct: 156 THSFLLPSEIVGREENKEEIIRKLSSNNEEILSVVAIVGFGGLGKTTLTQLVYNDERVKH 215

Query: 362 F 364
           F
Sbjct: 216 F 216


>ref|XP_003634798.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1300

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/121 (35%), Positives = 65/121 (53%)
 Frame = +2

Query: 2   RKVRDFIFRSKNSILYRFKMSHKIKNINISLDKIYKWAQEIGLRAVEHLNATVQRSEIRH 181
           R+V DF F   N +++RFKMSH++K+IN  LD I K    + L   + +  T +    R 
Sbjct: 96  RQVSDF-FSPVNQVVFRFKMSHRLKDINERLDAIEKKIPMLNLIPRDIVLHTREERSGRE 154

Query: 182 TPPSIDKTQIVGRDDDISRVVKLLCENNEKDLSVIAXXXXXXXXKTTLARLVYKSDEVMS 361
           T   +  + IVGR+++   +++ L  NNE+ LSV+A        KTTL + VY    V  
Sbjct: 155 THSFLLPSDIVGREENKEEIIRKLSSNNEEILSVVAIVGFGGLGKTTLTQSVYNDQRVKH 214

Query: 362 F 364
           F
Sbjct: 215 F 215


Top