BLASTX nr result

ID: Panax21_contig00022430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022430
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    53   5e-13
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    46   4e-10
ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cu...    70   8e-10
ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cu...    70   8e-10
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    44   5e-08

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 53.1 bits (126), Expect(2) = 5e-13
 Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
 Frame = +2

Query: 308 ILNGRSIVIFSLRGGKFHIWFNHQQIGSSISFDMPLDVENGLVGVTLWVVYA--SKDWNC 481
           IL  + I    L G +   W++HQ+  +S+SF +P      + G+ L +VY   + D  C
Sbjct: 276 ILQEQGIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKC 335

Query: 482 KSL-SARAYISDRRNAVEWTHS-----AAHKGGEILSVSHLALRYFGHPIKGGERFEVSI 643
            +L    A IS++   ++W+++         G ++L +SH   R+    ++ G++  VS 
Sbjct: 336 ATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSH--WRFGTDQLEVGDQVNVSA 393

Query: 644 AEDQSVKVQECGIHLV 691
           +     +V++CG+HLV
Sbjct: 394 SVTPDFQVKKCGVHLV 409



 Score = 48.1 bits (113), Expect(2) = 5e-13
 Identities = 24/64 (37%), Positives = 35/64 (54%)
 Frame = +3

Query: 3   PELPPNLVTLDASDCTSLDKLPDLSKLQNLQELDLSNCSRLTKIQGLINLNFLQTIHMEG 182
           PELP +L  L A  CT L+++ +L  L     L+L  C RL ++QGL NL  ++    + 
Sbjct: 183 PELPTSLKKLRAEKCTKLERIANLPNLLRSLRLNLIGCKRLVQVQGLFNLEMMREFDAKM 242

Query: 183 CSNL 194
             NL
Sbjct: 243 IYNL 246


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
 Frame = +2

Query: 281  LFLVLWNRD------ILNGRSIVIFSLRGGKFHIWFNHQQIGSSISFDMPLDVENGLVGV 442
            +F  + NR+      +L    IV F L G +   WF+H+  GSS+SF +    +  + G+
Sbjct: 872  MFSAIANREMRSPPQVLQECGIVSFFLAGNEVPHWFDHKSTGSSLSFTINPLSDYKIRGL 931

Query: 443  TLWVVYASKDWNCKSLSARAYISDRRN---AVEWTHSA---AHKGGEILSVSHLALRYFG 604
             L  VYA +D     L A  + +   N      W++S    A    +   +  L+   FG
Sbjct: 932  NLCTVYA-RDHEVYWLHAAGHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFG 990

Query: 605  HPIKGGERFEVSIAEDQSVKVQECGIHLV 691
               + G++  VS+       V+ECGI +V
Sbjct: 991  GEFEVGDKVNVSVRMPFGYYVKECGIRIV 1019



 Score = 45.1 bits (105), Expect(2) = 4e-10
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = +3

Query: 3   PELPPNLVTLDASDCTSLDKLPDLSKLQNLQELDLSNCSRLTKIQGLINLNFLQTIHME 179
           P+LP +L  L A  CTSL+++ +L  L +  +++L  C +L ++QGL  L    TI+M+
Sbjct: 794 PQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQLVEVQGLFKLE--PTINMD 850


>ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PELPPNLVTLDASDCTSLDKLPDLSKLQNLQELDLSNCSRLTKIQGLIN-LNFLQTIHME 179
           P LPP+L +L AS+CTSL++  DLS ++ +  L +SNC +L +I GL   L+ ++ IHME
Sbjct: 688 PNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHME 747

Query: 180 GCSNLTSTF 206
           GCSN++++F
Sbjct: 748 GCSNMSNSF 756


>ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PELPPNLVTLDASDCTSLDKLPDLSKLQNLQELDLSNCSRLTKIQGLIN-LNFLQTIHME 179
           P LPP+L +L AS+CTSL++  DLS ++ +  L +SNC +L +I GL   L+ ++ IHME
Sbjct: 748 PNLPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHME 807

Query: 180 GCSNLTSTF 206
           GCSN++++F
Sbjct: 808 GCSNMSNSF 816


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 43.9 bits (102), Expect(2) = 5e-08
 Identities = 22/67 (32%), Positives = 38/67 (56%)
 Frame = +3

Query: 6    ELPPNLVTLDASDCTSLDKLPDLSKLQNLQELDLSNCSRLTKIQGLINLNFLQTIHMEGC 185
            ELP +L  L+A +CTSL+++ +L  L     L+L+ C +L ++QG   L  +   H +  
Sbjct: 873  ELPASLRELNAENCTSLERITNLPNLMTSLRLNLAGCEQLVEVQGFFKLEPINN-HDKEM 931

Query: 186  SNLTSTF 206
            +N+   F
Sbjct: 932  ANMLGLF 938



 Score = 40.4 bits (93), Expect(2) = 5e-08
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
 Frame = +2

Query: 308  ILNGRSIVIFSLRGGKFHIWFNHQQIGSSISFDMPLDVENGLVGVTLWVVYASKDWNCKS 487
            +L+   I    L G +   W++ Q  G  ISF MP      + G+ + +VY   D     
Sbjct: 965  VLHECGICSIFLPGSEVPGWYSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVR-NG 1023

Query: 488  LSARAYIS--DRRNAVEWTHSAAHKG-----GEILSVSHLALRYFGHPIKGGERFEVSIA 646
            L+   YI   ++   ++WT+S    G       +L +SH  L      ++GG++  VS  
Sbjct: 1024 LTDHHYIKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDL---LEGGDQLNVSAV 1080

Query: 647  EDQSVKVQECGIHLV 691
                 + +   IHLV
Sbjct: 1081 MSTGYQAKNIRIHLV 1095


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