BLASTX nr result
ID: Panax21_contig00022423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022423 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin... 169 3e-40 gb|ADE74631.1| unknown [Vitis vinifera] 169 3e-40 ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin... 164 5e-39 ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin... 161 5e-38 ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containin... 159 2e-37 >ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis vinifera] Length = 740 Score = 169 bits (427), Expect = 3e-40 Identities = 87/105 (82%), Positives = 95/105 (90%), Gaps = 1/105 (0%) Frame = -3 Query: 313 RSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQ-TVLSPINTN 137 RSKTLTPSNLEELFSAE++SSPRYSD AV FSPSH+SA+L+QFQQQQ ++LSPINTN Sbjct: 500 RSKTLTPSNLEELFSAEISSSPRYSDSSAV---FSPSHKSAILNQFQQQQQSMLSPINTN 556 Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2 VFSPKNVEHPLLQASFG+SSPGRMSPRSMEPISP G RLS AQR Sbjct: 557 VFSPKNVEHPLLQASFGISSPGRMSPRSMEPISPMGPRLSAIAQR 601 >gb|ADE74631.1| unknown [Vitis vinifera] Length = 740 Score = 169 bits (427), Expect = 3e-40 Identities = 87/105 (82%), Positives = 95/105 (90%), Gaps = 1/105 (0%) Frame = -3 Query: 313 RSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQ-TVLSPINTN 137 RSKTLTPSNLEELFSAE++SSPRYSD AV FSPSH+SA+L+QFQQQQ ++LSPINTN Sbjct: 500 RSKTLTPSNLEELFSAEISSSPRYSDSSAV---FSPSHKSAILNQFQQQQQSMLSPINTN 556 Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2 VFSPKNVEHPLLQASFG+SSPGRMSPRSMEPISP G RLS AQR Sbjct: 557 VFSPKNVEHPLLQASFGISSPGRMSPRSMEPISPMGPRLSAIAQR 601 >ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Glycine max] Length = 701 Score = 164 bits (416), Expect = 5e-39 Identities = 83/105 (79%), Positives = 93/105 (88%) Frame = -3 Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137 GRSKTLTPSNL+ELFSAE++SSPRYSD AVA FSP H+S +++QFQQ Q+ LSPINT+ Sbjct: 464 GRSKTLTPSNLDELFSAEISSSPRYSDP-AVASVFSPRHKSTIMNQFQQLQSSLSPINTS 522 Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2 V SP+NVEHPLLQASFGVSSPGRMSPRSMEPISP SRLS FAQR Sbjct: 523 VSSPRNVEHPLLQASFGVSSPGRMSPRSMEPISPMSSRLSAFAQR 567 >ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Glycine max] Length = 683 Score = 161 bits (408), Expect = 5e-38 Identities = 83/105 (79%), Positives = 94/105 (89%) Frame = -3 Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137 GRSKTLTPSNL+ELFSAE++SSPRYSD AVA FSP+H+SA+++QFQQ Q+ LSPINT+ Sbjct: 452 GRSKTLTPSNLDELFSAEISSSPRYSDP-AVASVFSPTHKSAIMNQFQQLQSSLSPINTS 510 Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2 V SP+NVEHPL QASFGVSSPGRMSPRSMEPISP SRLS FAQR Sbjct: 511 VLSPRNVEHPLFQASFGVSSPGRMSPRSMEPISPMSSRLS-FAQR 554 >ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Glycine max] Length = 704 Score = 159 bits (402), Expect = 2e-37 Identities = 80/105 (76%), Positives = 91/105 (86%) Frame = -3 Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137 GRSK LTPSNLE+LFSAE++SSPRYSD A FSP+H+SAVL+QFQQ Q++LSPINTN Sbjct: 468 GRSKILTPSNLEDLFSAEISSSPRYSDPAA-GSVFSPTHKSAVLNQFQQLQSMLSPINTN 526 Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2 + SPKNVEHPLLQASFGVS GRMSPRS+EPISP SR+S FAQR Sbjct: 527 LLSPKNVEHPLLQASFGVSPSGRMSPRSVEPISPMSSRISAFAQR 571