BLASTX nr result

ID: Panax21_contig00022423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022423
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   169   3e-40
gb|ADE74631.1| unknown [Vitis vinifera]                               169   3e-40
ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin...   164   5e-39
ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin...   161   5e-38
ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containin...   159   2e-37

>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/105 (82%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 RSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQ-TVLSPINTN 137
           RSKTLTPSNLEELFSAE++SSPRYSD  AV   FSPSH+SA+L+QFQQQQ ++LSPINTN
Sbjct: 500 RSKTLTPSNLEELFSAEISSSPRYSDSSAV---FSPSHKSAILNQFQQQQQSMLSPINTN 556

Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2
           VFSPKNVEHPLLQASFG+SSPGRMSPRSMEPISP G RLS  AQR
Sbjct: 557 VFSPKNVEHPLLQASFGISSPGRMSPRSMEPISPMGPRLSAIAQR 601


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/105 (82%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 RSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQ-TVLSPINTN 137
           RSKTLTPSNLEELFSAE++SSPRYSD  AV   FSPSH+SA+L+QFQQQQ ++LSPINTN
Sbjct: 500 RSKTLTPSNLEELFSAEISSSPRYSDSSAV---FSPSHKSAILNQFQQQQQSMLSPINTN 556

Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2
           VFSPKNVEHPLLQASFG+SSPGRMSPRSMEPISP G RLS  AQR
Sbjct: 557 VFSPKNVEHPLLQASFGISSPGRMSPRSMEPISPMGPRLSAIAQR 601


>ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 701

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/105 (79%), Positives = 93/105 (88%)
 Frame = -3

Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137
           GRSKTLTPSNL+ELFSAE++SSPRYSD  AVA  FSP H+S +++QFQQ Q+ LSPINT+
Sbjct: 464 GRSKTLTPSNLDELFSAEISSSPRYSDP-AVASVFSPRHKSTIMNQFQQLQSSLSPINTS 522

Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2
           V SP+NVEHPLLQASFGVSSPGRMSPRSMEPISP  SRLS FAQR
Sbjct: 523 VSSPRNVEHPLLQASFGVSSPGRMSPRSMEPISPMSSRLSAFAQR 567


>ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 683

 Score =  161 bits (408), Expect = 5e-38
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = -3

Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137
           GRSKTLTPSNL+ELFSAE++SSPRYSD  AVA  FSP+H+SA+++QFQQ Q+ LSPINT+
Sbjct: 452 GRSKTLTPSNLDELFSAEISSSPRYSDP-AVASVFSPTHKSAIMNQFQQLQSSLSPINTS 510

Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2
           V SP+NVEHPL QASFGVSSPGRMSPRSMEPISP  SRLS FAQR
Sbjct: 511 VLSPRNVEHPLFQASFGVSSPGRMSPRSMEPISPMSSRLS-FAQR 554


>ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 704

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/105 (76%), Positives = 91/105 (86%)
 Frame = -3

Query: 316 GRSKTLTPSNLEELFSAELASSPRYSDQGAVAGAFSPSHRSAVLSQFQQQQTVLSPINTN 137
           GRSK LTPSNLE+LFSAE++SSPRYSD  A    FSP+H+SAVL+QFQQ Q++LSPINTN
Sbjct: 468 GRSKILTPSNLEDLFSAEISSSPRYSDPAA-GSVFSPTHKSAVLNQFQQLQSMLSPINTN 526

Query: 136 VFSPKNVEHPLLQASFGVSSPGRMSPRSMEPISPFGSRLSTFAQR 2
           + SPKNVEHPLLQASFGVS  GRMSPRS+EPISP  SR+S FAQR
Sbjct: 527 LLSPKNVEHPLLQASFGVSPSGRMSPRSVEPISPMSSRISAFAQR 571


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