BLASTX nr result

ID: Panax21_contig00022418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022418
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634300.1| PREDICTED: LRR repeats and ubiquitin-like do...    80   4e-13
ref|XP_003527102.1| PREDICTED: LRR repeats and ubiquitin-like do...    78   2e-12
ref|XP_003522997.1| PREDICTED: LRR repeats and ubiquitin-like do...    78   2e-12
ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like do...    78   2e-12
gb|ACU23408.1| unknown [Glycine max]                                   78   2e-12

>ref|XP_003634300.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Vitis vinifera]
           gi|297733905|emb|CBI15152.3| unnamed protein product
           [Vitis vinifera]
          Length = 261

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 45/80 (56%), Positives = 50/80 (62%), Gaps = 29/80 (36%)
 Frame = +3

Query: 3   LIHLKSLCLNNNSV-----------------------------KQMEGFQDFETRRKRKF 95
           LIHLKSLCLNNN++                             +QMEGFQ FETRRK+KF
Sbjct: 181 LIHLKSLCLNNNNINQIPPNLLKDCKALQNISLHDNPISMDQFQQMEGFQAFETRRKKKF 240

Query: 96  NKQIDSNVMISSKGLDEGVD 155
           +KQIDSNVMISSKGLDEGVD
Sbjct: 241 DKQIDSNVMISSKGLDEGVD 260


>ref|XP_003527102.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like isoform 2 [Glycine max]
          Length = 263

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/81 (54%), Positives = 49/81 (60%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   LIHLKSLCLNNNSVKQ-----------------------------MEGFQDFETRRKRKF 95
           L HLKSLCL+NN+VKQ                             MEGFQ+FE RRK+KF
Sbjct: 183 LSHLKSLCLDNNNVKQIPLNLLKDCKALQNISLHANPISMDQFQLMEGFQEFEARRKKKF 242

Query: 96  NKQIDSNVMISSKGLDEGVDL 158
           +KQIDSNVMI SKGLDEGVDL
Sbjct: 243 DKQIDSNVMIGSKGLDEGVDL 263


>ref|XP_003522997.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Glycine max]
          Length = 261

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/81 (54%), Positives = 49/81 (60%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   LIHLKSLCLNNNSVKQ-----------------------------MEGFQDFETRRKRKF 95
           L HLKSLCL+NN+VKQ                             MEGFQ+FE RRK+KF
Sbjct: 181 LSHLKSLCLDNNNVKQIPLNLLKDCIALQNISLHGNPISMDQFQQMEGFQEFEARRKKKF 240

Query: 96  NKQIDSNVMISSKGLDEGVDL 158
           +KQIDSNVMI SKGLDEGVDL
Sbjct: 241 DKQIDSNVMIGSKGLDEGVDL 261


>ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like isoform 1 [Glycine max]
          Length = 261

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/81 (54%), Positives = 49/81 (60%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   LIHLKSLCLNNNSVKQ-----------------------------MEGFQDFETRRKRKF 95
           L HLKSLCL+NN+VKQ                             MEGFQ+FE RRK+KF
Sbjct: 181 LSHLKSLCLDNNNVKQIPLNLLKDCKALQNISLHANPISMDQFQLMEGFQEFEARRKKKF 240

Query: 96  NKQIDSNVMISSKGLDEGVDL 158
           +KQIDSNVMI SKGLDEGVDL
Sbjct: 241 DKQIDSNVMIGSKGLDEGVDL 261


>gb|ACU23408.1| unknown [Glycine max]
          Length = 261

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 44/81 (54%), Positives = 49/81 (60%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   LIHLKSLCLNNNSVKQ-----------------------------MEGFQDFETRRKRKF 95
           L HLKSLCL+NN+VKQ                             MEGFQ+FE RRK+KF
Sbjct: 181 LSHLKSLCLDNNNVKQIPLNLLKDCIALQNISLHGNPISMDQFQQMEGFQEFEARRKKKF 240

Query: 96  NKQIDSNVMISSKGLDEGVDL 158
           +KQIDSNVMI SKGLDEGVDL
Sbjct: 241 DKQIDSNVMIGSKGLDEGVDL 261


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