BLASTX nr result
ID: Panax21_contig00022382
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022382
(1793 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78487.1| hypothetical protein VITISV_004930 [Vitis vinifera] 53 2e-13
gb|ABM55238.1| integrase [Beta vulgaris] 52 3e-13
gb|ABH08430.1| putative integrase [Beta vulgaris] 52 3e-13
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera] 56 4e-13
ref|XP_004148556.1| PREDICTED: uncharacterized protein LOC101218... 74 3e-12
>emb|CAN78487.1| hypothetical protein VITISV_004930 [Vitis vinifera]
Length = 971
Score = 52.8 bits (125), Expect(2) = 2e-13
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = -3
Query: 939 EGQSTSKPPFLLGRENFNL*KFKMKMYLNRDPWEWW-VVDNGPVISSHDDD---IPKTLM 772
E + + PF G N+ K +M YL + W V+++GP + D +PK
Sbjct: 11 ENFTKHRAPFFTGT-NYPYWKTRMTWYLQSTDLDVWDVIEDGPTFPTKLVDGILVPKPKQ 69
Query: 771 EMDTNESYMVSYDSKVMNTLLSGMVQSL--IVSACNTTKEIWDAIFMSHERTSKVKEVKL 598
E + + + ++KV TL M ++ I+ C + KEIW + ++HE T++VKE K+
Sbjct: 70 EWNELDRRIFQLNAKVAFTLQCAMDRNEYNIICQCKSAKEIWRLLEITHEETNQVKESKI 129
Query: 597 SILM 586
++L+
Sbjct: 130 NLLI 133
Score = 50.4 bits (119), Expect(2) = 2e-13
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Frame = -1
Query: 518 NEFSMLGRKINQREINIKLLRVMSKRFAPKVATLQDSSTISSMXXXXXXXXXXXXEN*HK 339
N LG+ + E +K+LR++ ++ KV T+Q++ ++ + E
Sbjct: 159 NGLEALGKTYKESEKVMKILRLLPSKWHTKVTTIQEAKDLTKLPIEELIGSLMTYEINLA 218
Query: 338 RYDEEEETPKKRTLALQAESNNEGDHE-----DSDEEMALMNRKLRDLIRRKNQSKFQGK 174
+ +E E KK+ +AL+A + + D E + D+++AL+ RKL +R + +F+G+
Sbjct: 219 KKLQESEDKKKKNIALKATTKEKEDFEEEKPSEEDDDLALITRKLNKYMRGE---RFKGR 275
Query: 173 IF-------NKDSKQNHKKKFALNVEGLVISRE------------IISNSKRRTKR---- 63
F K+S + K+ LV + S +KRR K+
Sbjct: 276 RFTSRRDISKKESSSHGDKEKWEEKRDLVCFKSKKPGHIKYDCPLYKSEAKRRMKKAMMV 335
Query: 62 TWSDDESQHEADQDDE 15
TWS+ E E + E
Sbjct: 336 TWSESEESFEEENKKE 351
>gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 52.4 bits (124), Expect(2) = 3e-13
Identities = 33/128 (25%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = -3
Query: 942 QEGQSTSKPPFLLGRENFNL*KFKMKMYLNRDPWEWW-VVDNGP--VISSHDDD--IPKT 778
+EG ST +PP G+ +N K +M++++ + ++ W V++ G V +++D + K
Sbjct: 8 EEGYSTQRPPMFNGKY-YNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKP 66
Query: 777 LMEMDTNESYMVSYDSKVMNTLLSGMV--QSLIVSACNTTKEIWDAIFMSHERTSKVKEV 604
L + D ++ + ++ + L G+ + + C + K+IWD + ++HE T++VK
Sbjct: 67 LSDYDKSDFEKMEVNAMAIKLLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVKRS 126
Query: 603 KLSILMQE 580
K+ +LM +
Sbjct: 127 KIDLLMNQ 134
Score = 50.4 bits (119), Expect(2) = 3e-13
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Frame = -1
Query: 518 NEFSMLGRKINQREINIKLLRVMSK-RFAPKVATLQDSSTISSMXXXXXXXXXXXXEN*H 342
NE + LG+ I+ E K+LR + K R+ KV LQ++ + H
Sbjct: 158 NELASLGKFISSEEQVRKVLRSLPKDRWMTKVTALQETKDFTKFNLEQLAGSLMT----H 213
Query: 341 KRYDEEE--ETPKKRTLALQAESNNEGDHEDSDEEMALMNRKLRDLIRRKNQSKFQGKI- 171
+ + + E E+ K +++AL+A+ ++ D E+ EE ALM RK R + R F+GK
Sbjct: 214 ELHLDTEYGESSKSKSIALKADDEDDSDSEE--EEAALMVRKFRKMYRNMKNGNFKGKTK 271
Query: 170 ------------------------FNKDSKQNHKKKFA-LNVEGLVISREIISNSKRRTK 66
N +K+ +K++FA N E + +N ++
Sbjct: 272 KFSNKAACHKCGSTDHFIKECPLWENDKTKERNKERFAERNKESKAPFSK--ANVRKAMI 329
Query: 65 RTWSDDESQHEADQDDE 15
W D E + E +Q E
Sbjct: 330 AAWGDSEMEEEEEQPTE 346
>gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 52.4 bits (124), Expect(2) = 3e-13
Identities = 33/128 (25%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = -3
Query: 942 QEGQSTSKPPFLLGRENFNL*KFKMKMYLNRDPWEWW-VVDNGP--VISSHDDD--IPKT 778
+EG ST +PP G+ +N K +M++++ + ++ W V++ G V +++D + K
Sbjct: 8 EEGYSTQRPPMFNGKY-YNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKP 66
Query: 777 LMEMDTNESYMVSYDSKVMNTLLSGMV--QSLIVSACNTTKEIWDAIFMSHERTSKVKEV 604
L + D ++ + ++ + L G+ + + C + K+IWD + ++HE T++VK
Sbjct: 67 LSDYDKSDFEKMEVNAMAIKLLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVKRS 126
Query: 603 KLSILMQE 580
K+ +LM +
Sbjct: 127 KIDLLMNQ 134
Score = 50.4 bits (119), Expect(2) = 3e-13
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Frame = -1
Query: 518 NEFSMLGRKINQREINIKLLRVMSK-RFAPKVATLQDSSTISSMXXXXXXXXXXXXEN*H 342
NE + LG+ I+ E K+LR + K R+ KV LQ++ + H
Sbjct: 158 NELASLGKFISSEEQVRKVLRSLPKDRWMTKVTALQETKDFTKFNLEQLAGSLMT----H 213
Query: 341 KRYDEEE--ETPKKRTLALQAESNNEGDHEDSDEEMALMNRKLRDLIRRKNQSKFQGKI- 171
+ + + E E+ K +++AL+A+ ++ D E+ EE ALM RK R + R F+GK
Sbjct: 214 ELHLDTEYGESSKSKSIALKADDEDDSDSEE--EEAALMVRKFRKMYRNMKNGNFKGKTK 271
Query: 170 ------------------------FNKDSKQNHKKKFA-LNVEGLVISREIISNSKRRTK 66
N +K+ +K++FA N E + +N ++
Sbjct: 272 KFSNKAACHKCGSTDHFIKKCPLWENDKTKERNKERFAERNKESKAPFSK--ANVRKAMI 329
Query: 65 RTWSDDESQHEADQDDE 15
W D E + E +Q E
Sbjct: 330 AAWGDSEMEEEEEQPTE 346
>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 55.8 bits (133), Expect(2) = 4e-13
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Frame = -1
Query: 518 NEFSMLGRKINQREINIKLLRVMSKRFAPKVATLQDSSTISSMXXXXXXXXXXXXEN*HK 339
N LGR IN+ E +K+LR + ++ KV +Q++ ++ + E
Sbjct: 159 NGLEALGRVINESEKVMKILRSLPSKWHTKVTAIQEAKDLTKLPMEELLGSLMTYEISLT 218
Query: 338 RYDEEEETPKKRTLALQAESNNEGDHE-----DSDEEMALMNRKLRDLIRRKNQSKFQGK 174
+ +E E KK+ +AL+A + E D E + D+++AL+ RKL +R + +F+GK
Sbjct: 219 KQPQESEDKKKKNIALKATTKEEEDVEEEKPSEEDDDLALITRKLNKYMRGE---RFRGK 275
Query: 173 IF--------NKDSKQNHKKKFALNVEGLVISREIISN-----------SKRRTKR---- 63
F + S K+K+ + + + + +KRR K+
Sbjct: 276 KFTSRRNPSRRESSSHGDKEKWEEKSDLICFKCKNPGHIKYDCPLYKIEAKRRMKKAMMA 335
Query: 62 TWSDDESQHEADQDDETA 9
TWS+ E E +++ E A
Sbjct: 336 TWSESEESSEEEKEKEVA 353
Score = 46.6 bits (109), Expect(2) = 4e-13
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = -3
Query: 939 EGQSTSKPPFLLGRENFNL*KFKMKMYLNRDPWEWW-VVDNGPVISSHDDD---IPKTLM 772
E S + PF G + + K +M +L + W V+++GP + D +PK
Sbjct: 11 ENFSKHRAPFFTGTD-YPYWKARMTWFLQSTDLDVWDVIEDGPTFPTKLVDGVLVPKPKK 69
Query: 771 EMDTNESYMVSYDSKVMNTLLSGMVQSLI--VSACNTTKEIWDAIFMSHERTSKVKEVKL 598
E + + ++K + TL M ++ + C + KEIW + ++HE T++VKE K+
Sbjct: 70 EWNELDRRNFQLNAKAVFTLQCAMDRNEYNRICQCKSAKEIWRLLEITHEGTNQVKESKI 129
Query: 597 SILM 586
+IL+
Sbjct: 130 NILV 133
>ref|XP_004148556.1| PREDICTED: uncharacterized protein LOC101218085 [Cucumis sativus]
Length = 388
Score = 73.6 bits (179), Expect(2) = 3e-12
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Frame = -3
Query: 939 EGQSTSKPPFLLGRENFNL*KFKMKMYLNRDPWEWW-VVDNGPVI---SSHDDDIPKTLM 772
EGQSTS+PP+ G N+ K +MK+YL + W +V GP + + + D PK
Sbjct: 11 EGQSTSRPPYFDG-SNYAYWKARMKIYLQSIDYNLWLIVAKGPYVPMKNVDNVDTPKLEE 69
Query: 771 EMDTNESYMVSYDSKVMNTLLSGMVQSLI--VSACNTTKEIWDAIFMSHERTSKVKEVKL 598
E D NE S+++K +N L + + +S C++ +EIW+ + ++HE T++VKE K+
Sbjct: 70 EYDENEMKKCSFNAKAINCLYCALSKDEFNRISMCSSAQEIWNTLEITHEGTNQVKESKI 129
Query: 597 SILM 586
S+ +
Sbjct: 130 SMFV 133
Score = 25.8 bits (55), Expect(2) = 3e-12
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 580 KLFKLEKNETIKEAQARFFTLTNSVCLGGKL 488
+LFK++ NETI + RF + N++ GK+
Sbjct: 137 ELFKMDANETITDMFTRFTNIINALKGLGKV 167