BLASTX nr result

ID: Panax21_contig00022380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022380
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondria...   246   2e-63
gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoe...   242   3e-62
ref|XP_004140898.1| PREDICTED: nifU-like protein 4, mitochondria...   226   2e-57
ref|NP_001030735.1| NifU-like protein 4 [Arabidopsis thaliana] g...   226   3e-57
ref|NP_566673.1| NifU-like protein 4 [Arabidopsis thaliana] gi|7...   226   3e-57

>ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Vitis vinifera]
          Length = 271

 Score =  246 bits (629), Expect = 2e-63
 Identities = 127/184 (69%), Positives = 147/184 (79%), Gaps = 2/184 (1%)
 Frame = +2

Query: 59  RNLGRLLGRAFLCKILEPYAANTYISCRLLFVSSTRQSDAFAEINSFKATPSLQAS--PW 232
           + LGRL+GR  LCK LEP+     +  RL+F S T  S      +S + T    +S   W
Sbjct: 2   KGLGRLIGRRLLCKRLEPWR-KPLMPRRLIFSSFTTTSYLENPTSSSRFTSFKSSSLPKW 60

Query: 233 TQFGGQRRNMFIQTQPTPNPLSLMFYPGKPVMEVGSSDFPNARSAMNAPLAKALYGIDGV 412
           + FGGQRR MFIQTQ TPNP SLMFYPGKPVMEVGS+DFPN+RSAM++PLAK+LYGIDG+
Sbjct: 61  SHFGGQRRTMFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGI 120

Query: 413 TRVFFGSDFVTVTKSEDVSWDFLKPEIFAAIMDFYSSGQPLFLDSATAAAKDTAINEDDS 592
           TRVFFGSDF+TVTKS+D SWDF+KPEIFAAIMDFYSSG+PLFLDS TAAA DTAI+EDDS
Sbjct: 121 TRVFFGSDFITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDTAIHEDDS 180

Query: 593 ETVA 604
           ETVA
Sbjct: 181 ETVA 184


>gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
           gi|325087311|gb|ADY77005.1| iron-sulfur cluster assembly
           protein NFU4 [Ipomoea batatas]
          Length = 281

 Score =  242 bits (618), Expect = 3e-62
 Identities = 130/194 (67%), Positives = 150/194 (77%), Gaps = 12/194 (6%)
 Frame = +2

Query: 59  RNLGRLLGRAFLCK----ILEPYAAN---TYISCRLLFVSSTRQ-SDAFAEINSFKATPS 214
           + LGRL+ +A  C+    +++ YAA        CRLLF SS+ Q   AF+   S K+ P 
Sbjct: 2   KGLGRLISQAARCRSNSRLVKSYAAEGGGLRAYCRLLFASSSSQVPSAFSNFTSLKS-PH 60

Query: 215 LQASP----WTQFGGQRRNMFIQTQPTPNPLSLMFYPGKPVMEVGSSDFPNARSAMNAPL 382
           L +SP    W   GGQRR MFIQTQ TPNPLSLMFYPGKPVME GS+DFPNARSAMN+PL
Sbjct: 61  LPSSPYSATWATNGGQRRTMFIQTQSTPNPLSLMFYPGKPVMETGSADFPNARSAMNSPL 120

Query: 383 AKALYGIDGVTRVFFGSDFVTVTKSEDVSWDFLKPEIFAAIMDFYSSGQPLFLDSATAAA 562
           AKAL+GIDG+TRVF+GSDFVTVTKS+D SWD LKPEIFAAIMDF+SSG+PLFLDS TAA+
Sbjct: 121 AKALFGIDGITRVFYGSDFVTVTKSDDASWDLLKPEIFAAIMDFFSSGKPLFLDSNTAAS 180

Query: 563 KDTAINEDDSETVA 604
            DTAI EDDSETVA
Sbjct: 181 MDTAIQEDDSETVA 194


>ref|XP_004140898.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Cucumis
           sativus] gi|449494166|ref|XP_004159467.1| PREDICTED:
           nifU-like protein 4, mitochondrial-like [Cucumis
           sativus]
          Length = 273

 Score =  226 bits (576), Expect = 2e-57
 Identities = 112/131 (85%), Positives = 118/131 (90%)
 Frame = +2

Query: 212 SLQASPWTQFGGQRRNMFIQTQPTPNPLSLMFYPGKPVMEVGSSDFPNARSAMNAPLAKA 391
           SL++    QFGGQRR MFI+TQ TPNP SLMFYPGKPVMEVGS+DFPNARSAMN+PLAKA
Sbjct: 56  SLRSWKSIQFGGQRRTMFIETQSTPNPSSLMFYPGKPVMEVGSADFPNARSAMNSPLAKA 115

Query: 392 LYGIDGVTRVFFGSDFVTVTKSEDVSWDFLKPEIFAAIMDFYSSGQPLFLDSATAAAKDT 571
           LYG+DGV RVFFGSDFVTVTKS D SWDFLKPEIFAAIMDFYSSGQPLFLDS TAAA DT
Sbjct: 116 LYGVDGVVRVFFGSDFVTVTKSNDASWDFLKPEIFAAIMDFYSSGQPLFLDSKTAAAMDT 175

Query: 572 AINEDDSETVA 604
           AI EDDSETVA
Sbjct: 176 AIKEDDSETVA 186


>ref|NP_001030735.1| NifU-like protein 4 [Arabidopsis thaliana]
           gi|332642928|gb|AEE76449.1| NifU-like protein 4
           [Arabidopsis thaliana]
          Length = 222

 Score =  226 bits (575), Expect = 3e-57
 Identities = 120/190 (63%), Positives = 140/190 (73%), Gaps = 9/190 (4%)
 Frame = +2

Query: 62  NLGRLLGRAFLC---KILEPYAANTYISCRLLFVSSTR------QSDAFAEINSFKATPS 214
           +L R+ GR  +     +    +++  +S R LF+S+T       +  A   +NS     S
Sbjct: 10  SLSRIGGRKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNS-----S 64

Query: 215 LQASPWTQFGGQRRNMFIQTQPTPNPLSLMFYPGKPVMEVGSSDFPNARSAMNAPLAKAL 394
           L A  W   GGQRR MFIQTQ TPNP SLMFYPGKPVMEVGS+DFPN RSA+ +PLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 395 YGIDGVTRVFFGSDFVTVTKSEDVSWDFLKPEIFAAIMDFYSSGQPLFLDSATAAAKDTA 574
           Y IDGV RVFFGSDFVTVTKS+DVSWD LKPEIFAA+MDFYSSGQPLFLDS  AAAKDTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 575 INEDDSETVA 604
           I+EDDSETVA
Sbjct: 185 ISEDDSETVA 194


>ref|NP_566673.1| NifU-like protein 4 [Arabidopsis thaliana]
           gi|75273382|sp|Q9LIG6.1|NIFU4_ARATH RecName:
           Full=NifU-like protein 4, mitochondrial;
           Short=AtNfu-III; Short=AtNfu4; Flags: Precursor
           gi|13899085|gb|AAK48964.1|AF370537_1 Unknown protein
           [Arabidopsis thaliana] gi|9294004|dbj|BAB01907.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|18377516|gb|AAL66924.1| unknown protein [Arabidopsis
           thaliana] gi|28207822|emb|CAD55561.1| NFU4 protein
           [Arabidopsis thaliana] gi|332642927|gb|AEE76448.1|
           NifU-like protein 4 [Arabidopsis thaliana]
          Length = 283

 Score =  226 bits (575), Expect = 3e-57
 Identities = 120/190 (63%), Positives = 140/190 (73%), Gaps = 9/190 (4%)
 Frame = +2

Query: 62  NLGRLLGRAFLC---KILEPYAANTYISCRLLFVSSTR------QSDAFAEINSFKATPS 214
           +L R+ GR  +     +    +++  +S R LF+S+T       +  A   +NS     S
Sbjct: 10  SLSRIGGRKVVSGTSTVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNS-----S 64

Query: 215 LQASPWTQFGGQRRNMFIQTQPTPNPLSLMFYPGKPVMEVGSSDFPNARSAMNAPLAKAL 394
           L A  W   GGQRR MFIQTQ TPNP SLMFYPGKPVMEVGS+DFPN RSA+ +PLAK++
Sbjct: 65  LLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSI 124

Query: 395 YGIDGVTRVFFGSDFVTVTKSEDVSWDFLKPEIFAAIMDFYSSGQPLFLDSATAAAKDTA 574
           Y IDGV RVFFGSDFVTVTKS+DVSWD LKPEIFAA+MDFYSSGQPLFLDS  AAAKDTA
Sbjct: 125 YSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTA 184

Query: 575 INEDDSETVA 604
           I+EDDSETVA
Sbjct: 185 ISEDDSETVA 194


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