BLASTX nr result

ID: Panax21_contig00022376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022376
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]              157   5e-36
ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807...   153   8e-35
ref|XP_003544404.1| PREDICTED: uncharacterized protein LOC100794...   152   1e-34
ref|XP_003589349.1| Short internode related sequence [Medicago t...   147   4e-33
dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]                         139   1e-30

>gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]
          Length = 367

 Score =  157 bits (396), Expect = 5e-36
 Identities = 101/208 (48%), Positives = 116/208 (55%), Gaps = 24/208 (11%)
 Frame = -3

Query: 554 MSGFFTLG-GKE------QEPDQK----TPTYNNN---SLYLFRNEEIYNKGFELWXXXX 417
           MSGFF+LG GK+      QE +Q+    T  +NN+   SLYLF+NEEIYNKGFELW    
Sbjct: 1   MSGFFSLGAGKDPHHHHHQETEQQEAADTTNHNNSNSSSLYLFKNEEIYNKGFELWQQYY 60

Query: 416 XXXXXXXXXXLEDHH------VDLSPVGGSSSRRLITTNYINVSXXXXXXXDQSILLYNN 255
                        HH      VD S    +S+R++I     +                NN
Sbjct: 61  HLHQQRGVHLHHHHHHQDHHVVDFSVGPSTSTRKIIAAAGSSDDN-------------NN 107

Query: 254 NNRSSPL---GFGLMSQS-GAGGVGGNNNMRXXXXXXXSMNCQDCGNQAKKDCENMRCRT 87
           N+ SS     GF LM  S G GG GG             MNCQDCGNQAKKDC ++RCRT
Sbjct: 108 NSNSSSYRSSGFRLMRSSVGIGGGGGG------------MNCQDCGNQAKKDCTHLRCRT 155

Query: 86  CCKSRGFQCQTHVKSTWVPAAKRRERQQ 3
           CCKSRGFQCQTHVKSTWVPAAKRRERQQ
Sbjct: 156 CCKSRGFQCQTHVKSTWVPAAKRRERQQ 183


>ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807290 [Glycine max]
          Length = 326

 Score =  153 bits (386), Expect = 8e-35
 Identities = 91/190 (47%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
 Frame = -3

Query: 554 MSGFFTLGGKEQEPDQKTPTYNNNSLYLFRN---EEIYNKGFELWXXXXXXXXXXXXXXL 384
           M+GFF+LG + +  +Q+     +N  +LFRN   EEIYNKGFE+W               
Sbjct: 1   MAGFFSLGRQNKAEEQEEDQREDNCQFLFRNNVNEEIYNKGFEIWPQSSY---------- 50

Query: 383 EDHHVDLS---PVGGSSSRRLITTNYINVSXXXXXXXDQSILLYNNNNRSSPLGFGLMSQ 213
             HH +L+     G   SRR    N  N S       + S+   + +NR    GF +M +
Sbjct: 51  HHHHQNLTNFYSFGVGPSRR----NNNNSSSNNNVNDEVSVSFSDESNR---FGFTVM-R 102

Query: 212 SGAGGVGGNNNMRXXXXXXXSMNCQDCGNQAKKDCENMRCRTCCKSRGFQCQTHVKSTWV 33
           SG GGVGG             MNCQDCGNQAKKDC+++RCRTCCKSRGFQCQTHVKSTWV
Sbjct: 103 SGGGGVGGGG-----------MNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWV 151

Query: 32  PAAKRRERQQ 3
           PAAKRRERQQ
Sbjct: 152 PAAKRRERQQ 161


>ref|XP_003544404.1| PREDICTED: uncharacterized protein LOC100794846 [Glycine max]
          Length = 333

 Score =  152 bits (385), Expect = 1e-34
 Identities = 97/200 (48%), Positives = 111/200 (55%), Gaps = 16/200 (8%)
 Frame = -3

Query: 554 MSGFFTLGG-----KEQEPDQKTPTYNN-----NSLYLFRN---EEIYNKGFELWXXXXX 414
           M+GFF+LG       EQE DQ+    NN     NS +LFRN   EEIYNKGFE+W     
Sbjct: 1   MAGFFSLGAGRQNKAEQEEDQREENVNNAGGNNNSQFLFRNNVSEEIYNKGFEIWPQSSY 60

Query: 413 XXXXXXXXXLEDHHVDLS---PVGGSSSRRLITTNYINVSXXXXXXXDQSILLYNNNNRS 243
                       HH +L+     G   SRR    N  N S       D S+   + +NR 
Sbjct: 61  H-----------HHQNLTNFYSFGVGPSRR----NNHNNSSSNNVNDDVSVSFSDESNR- 104

Query: 242 SPLGFGLMSQSGAGGVGGNNNMRXXXXXXXSMNCQDCGNQAKKDCENMRCRTCCKSRGFQ 63
              GF +MS  G GG G              MNCQDCGNQAKKDC+++RCRTCCKSRGFQ
Sbjct: 105 --FGFTVMSSGGGGGGG--------------MNCQDCGNQAKKDCQHLRCRTCCKSRGFQ 148

Query: 62  CQTHVKSTWVPAAKRRERQQ 3
           CQTHVKSTWVPAAKRRERQQ
Sbjct: 149 CQTHVKSTWVPAAKRRERQQ 168


>ref|XP_003589349.1| Short internode related sequence [Medicago truncatula]
           gi|355478397|gb|AES59600.1| Short internode related
           sequence [Medicago truncatula]
          Length = 325

 Score =  147 bits (371), Expect = 4e-33
 Identities = 88/192 (45%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
 Frame = -3

Query: 554 MSGFFTLG---GKEQEPDQK---TPTYNNNSLYLFRNEEIYNKGFELWXXXXXXXXXXXX 393
           M+GFF+L    GKE+  +Q+     + NNN+ ++FRNEEIYNKGFE+W            
Sbjct: 1   MAGFFSLSSGRGKEEAREQEENNNNSGNNNNQFVFRNEEIYNKGFEIWPQQHQQSSFHHH 60

Query: 392 XXLEDHHVD-LSPVGGSSSRRLITTNYINVSXXXXXXXDQSILLYNNNNRSSPLGFGL-M 219
                 +++     G  SSRR    N  N +         S+   + + R     FGL +
Sbjct: 61  QQQHQQNINNFYSFGVGSSRRNDDNNNNNDNV--------SVSFSDESTR-----FGLTV 107

Query: 218 SQSGAGGVGGNNNMRXXXXXXXSMNCQDCGNQAKKDCENMRCRTCCKSRGFQCQTHVKST 39
            +S +GG+GG             MNCQDCGNQAKKDC ++RCRTCCKSRGFQCQTHVKST
Sbjct: 108 MRSSSGGLGGGG-----------MNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKST 156

Query: 38  WVPAAKRRERQQ 3
           WVPAAKRRERQQ
Sbjct: 157 WVPAAKRRERQQ 168


>dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]
          Length = 315

 Score =  139 bits (350), Expect = 1e-30
 Identities = 84/188 (44%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
 Frame = -3

Query: 554 MSGFFTLGGKEQEPDQKTPTYNN--NSLYLFR--NEEIYNKGFELWXXXXXXXXXXXXXX 387
           M+G+F L G+E     K     N  N+L+L+R  NE+IYNKGFE+W              
Sbjct: 1   MAGWFYLSGREGAVTSKQGEDKNQENNLFLYRSNNEQIYNKGFEIWPQYYHQ-------- 52

Query: 386 LEDHHVDLSPVGGSSSRRLITTNYINVSXXXXXXXDQSILLYNNNNRSSPLGFGLMSQSG 207
            + +  + S  G   SRR  +                        + SS  GF +M Q G
Sbjct: 53  -QQNMNNYSSFGVGPSRRSFS------------------------DESSRSGFTVMRQGG 87

Query: 206 AGGVGGNNNMRXXXXXXXSMNCQDCGNQAKKDCENMRCRTCCKSRGFQCQTHVKSTWVPA 27
            GG GG             MNCQDCGNQAKKDC ++RCRTCCKSRGFQCQTHVKSTWVPA
Sbjct: 88  LGGGGGG------------MNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPA 135

Query: 26  AKRRERQQ 3
           AKRRERQQ
Sbjct: 136 AKRRERQQ 143


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