BLASTX nr result

ID: Panax21_contig00022375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022375
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   519   e-145
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   514   e-143
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   507   e-141
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   507   e-141
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   505   e-140

>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
          Length = 785

 Score =  519 bits (1336), Expect = e-145
 Identities = 261/314 (83%), Positives = 275/314 (87%), Gaps = 6/314 (1%)
 Frame = +2

Query: 2    PAIRPELDLVEQEDQLTHEISLLDQIDPEVALDIFKPDPQFIENEQRYEELKKTLLGXXX 181
            PA+RPELDLVEQEDQLTHEISL ++IDPE+ LDIFKPDPQF+E+E+RYEELKKT+LG   
Sbjct: 426  PAVRPELDLVEQEDQLTHEISLEEKIDPEITLDIFKPDPQFLESEKRYEELKKTILGEES 485

Query: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXX------QMRIRDETETNLVNLRRTIYLTIMSSV 343
                                             QM+I+DETETNLVNLRRTIYLTIMSS+
Sbjct: 486  EDEAGSDAGSDDEDEDEDDDEDDDEDDDEEDEQQMKIKDETETNLVNLRRTIYLTIMSSI 545

Query: 344  DFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEK 523
            DFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEK
Sbjct: 546  DFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEK 605

Query: 524  CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILF 703
            CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWH LAYIRLTEEDTTSSSRIFIKILF
Sbjct: 606  CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILF 665

Query: 704  QELSEHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYL 883
            QELSEHLGIRLLNERL+DP+MQDSFESIFP+DNPKNTRFSINFFTSIGLGGITENLREYL
Sbjct: 666  QELSEHLGIRLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYL 725

Query: 884  KNMPRLIMQQQKPV 925
            KNMPRLIMQQQKPV
Sbjct: 726  KNMPRLIMQQQKPV 739


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  514 bits (1325), Expect = e-143
 Identities = 254/308 (82%), Positives = 272/308 (88%)
 Frame = +2

Query: 2    PAIRPELDLVEQEDQLTHEISLLDQIDPEVALDIFKPDPQFIENEQRYEELKKTLLGXXX 181
            PA+RPELDLVEQEDQ+THE+SL ++IDPE++LDIFKPDP F+ENE+RYEELKK++LG   
Sbjct: 522  PAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEES 581

Query: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXXQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 361
                                       QM+I+DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 582  EDDEEGLDSESDDDDDEDDESDEEEEEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAG 641

Query: 362  HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY 541
            HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY
Sbjct: 642  HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY 701

Query: 542  SMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILFQELSEH 721
            SMIHRLETNKLRNV KFFAHLLGTDALPWH L+YIRLTEEDTTSSSRIFIKILFQELSEH
Sbjct: 702  SMIHRLETNKLRNVGKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEH 761

Query: 722  LGIRLLNERLSDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRL 901
            LGIRLLNERL+DPTMQ+SFESIFP+DNPKNTRF INFFTSIGLGG+TENLREYLKNMPRL
Sbjct: 762  LGIRLLNERLNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRL 821

Query: 902  IMQQQKPV 925
            IMQQQK V
Sbjct: 822  IMQQQKQV 829


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  507 bits (1306), Expect = e-141
 Identities = 254/310 (81%), Positives = 270/310 (87%), Gaps = 2/310 (0%)
 Frame = +2

Query: 2    PAIRPELDLVEQEDQLTHEISLLDQIDPEVALDIFKPDPQFIENEQRYEELKKTLLG--X 175
            PA+RPELDLVEQEDQLTHEISL ++IDPE+ LDIFK DP F+ENE+RYE+LKK +LG   
Sbjct: 443  PAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEES 502

Query: 176  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMRIRDETETNLVNLRRTIYLTIMSSVDFEE 355
                                         QM+I DETETNLVNLRRTIYLTIMSSVDFEE
Sbjct: 503  EDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEE 562

Query: 356  AGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQ 535
            AGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INKV+QENF+KCFVQ
Sbjct: 563  AGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQ 622

Query: 536  QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILFQELS 715
            QYSMIHRLETNKLRNVAKFFAHLLGTDALPWH L+YIRLTEEDTTSSSRIFIKILFQELS
Sbjct: 623  QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELS 682

Query: 716  EHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMP 895
            EHLGIRLLNERL+DPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGG+TENLREYLKNMP
Sbjct: 683  EHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMP 742

Query: 896  RLIMQQQKPV 925
            RLIMQQQKPV
Sbjct: 743  RLIMQQQKPV 752


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  507 bits (1305), Expect = e-141
 Identities = 253/308 (82%), Positives = 272/308 (88%)
 Frame = +2

Query: 2    PAIRPELDLVEQEDQLTHEISLLDQIDPEVALDIFKPDPQFIENEQRYEELKKTLLGXXX 181
            PA+RPELDLVEQEDQ+THE+SL ++IDPE++LDIFKPDP F+ENE+RYEELKK++LG   
Sbjct: 506  PAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEES 565

Query: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXXQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAG 361
                                       +M+I+DETETNLVNLRRTIYLTIMSSVDFEEAG
Sbjct: 566  EDDEEGLDAESDDDDEDDDSDEEDEE-EMQIKDETETNLVNLRRTIYLTIMSSVDFEEAG 624

Query: 362  HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY 541
            HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY
Sbjct: 625  HKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQY 684

Query: 542  SMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILFQELSEH 721
            SMIHRLETNKLRNVAKFFAHLLGTDALPWH L+YIRLTEEDTTSSSRIFIKILFQELSEH
Sbjct: 685  SMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEH 744

Query: 722  LGIRLLNERLSDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRL 901
            LGIRLLNERL+D TMQ+SFESIFP+DNPKNTRF INFFTSIGLGG+TENLREYLKNMPRL
Sbjct: 745  LGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRL 804

Query: 902  IMQQQKPV 925
            IMQQQK V
Sbjct: 805  IMQQQKQV 812


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
            homolog, partial [Cucumis sativus]
          Length = 780

 Score =  505 bits (1300), Expect = e-140
 Identities = 253/310 (81%), Positives = 269/310 (86%), Gaps = 2/310 (0%)
 Frame = +2

Query: 2    PAIRPELDLVEQEDQLTHEISLLDQIDPEVALDIFKPDPQFIENEQRYEELKKTLLG--X 175
            PA+RPELDLVEQEDQLTHEISL ++IDPE+ LDIFK DP F+ENE+RYE+LKK +LG   
Sbjct: 443  PAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKXILGEES 502

Query: 176  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMRIRDETETNLVNLRRTIYLTIMSSVDFEE 355
                                         QM+I DETETNLVNLRRTIYLTIMSSVDFEE
Sbjct: 503  EDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEE 562

Query: 356  AGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQ 535
            AGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INKV+QENF+KCFVQ
Sbjct: 563  AGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQ 622

Query: 536  QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHALAYIRLTEEDTTSSSRIFIKILFQELS 715
            QYSMIHRLETNKLRNVAKFFAHLLGTDALPWH L+YIRLTEEDTTSSSRIFIKILFQELS
Sbjct: 623  QYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELS 682

Query: 716  EHLGIRLLNERLSDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMP 895
            EHLGIRLLNERL+DPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGG+TENLREY KNMP
Sbjct: 683  EHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYXKNMP 742

Query: 896  RLIMQQQKPV 925
            RLIMQQQKPV
Sbjct: 743  RLIMQQQKPV 752


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