BLASTX nr result

ID: Panax21_contig00022368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022368
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   387   e-105
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   369   e-100
emb|CBI39650.3| unnamed protein product [Vitis vinifera]              368   e-100
emb|CBI39651.3| unnamed protein product [Vitis vinifera]              364   7e-99
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   364   7e-99

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  387 bits (994), Expect = e-105
 Identities = 190/219 (86%), Positives = 210/219 (95%)
 Frame = +1

Query: 1    LRSVNQEMSKEELRRQHQAELARQKNEETARRLTGGDSGAVDNRGAMKSSGDLVAYKNVN 180
            LRS NQEMSKEELRRQHQAELARQKNEETARRL GG SGA DNRGA+K++GDL+AYKNVN
Sbjct: 487  LRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVN 546

Query: 181  DLPPPRGLLIQIDQKNEAILLPIYGSMVPFHVATVKSVTSQQDTSRTCYIRIIFNVPGTP 360
            DLPPP+ L+IQ+DQKNEAILLPIYGSMVPFHVATVKSV+SQQDT+RTCYIRIIFNVPGTP
Sbjct: 547  DLPPPKELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRTCYIRIIFNVPGTP 606

Query: 361  FNPHDSNTLKFQGSIYVKEVSFRSRDPRHSSEVVQLIKTLRRQVASRESERAERATLVTQ 540
            F+PHDSN++KFQGSIY+KEVSFRS+DPRH SEVVQ+IKTLRRQVASRESERAERATLVTQ
Sbjct: 607  FSPHDSNSMKFQGSIYLKEVSFRSKDPRHISEVVQMIKTLRRQVASRESERAERATLVTQ 666

Query: 541  EKLQLAGAKFKPIRLSDLWIRPVFGGRGRKVIGTLEAHS 657
            EKLQLAG +FKPIRLSDLWIRP FGGRGRK+ G+LE+H+
Sbjct: 667  EKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHT 705


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  369 bits (946), Expect = e-100
 Identities = 182/218 (83%), Positives = 200/218 (91%)
 Frame = +1

Query: 1    LRSVNQEMSKEELRRQHQAELARQKNEETARRLTGGDSGAVDNRGAMKSSGDLVAYKNVN 180
            LRS N EMSKEELRRQHQAELARQKNEETARRL GG S A DNRG++K  GDL+AYKNVN
Sbjct: 484  LRSDNHEMSKEELRRQHQAELARQKNEETARRLAGGGSSASDNRGSVKMIGDLIAYKNVN 543

Query: 181  DLPPPRGLLIQIDQKNEAILLPIYGSMVPFHVATVKSVTSQQDTSRTCYIRIIFNVPGTP 360
            DLPPPR L+IQ+DQKNEAIL+PI+GSMVPFHVATVKSV+SQQD++RTCYIRI FNVPGTP
Sbjct: 544  DLPPPRDLMIQVDQKNEAILIPIHGSMVPFHVATVKSVSSQQDSNRTCYIRITFNVPGTP 603

Query: 361  FNPHDSNTLKFQGSIYVKEVSFRSRDPRHSSEVVQLIKTLRRQVASRESERAERATLVTQ 540
            F+PHD+NTLKFQGSIY+KE+SFRS+D RH SEVVQ IKTLRRQV SRESERAERATLVTQ
Sbjct: 604  FSPHDANTLKFQGSIYLKEISFRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQ 663

Query: 541  EKLQLAGAKFKPIRLSDLWIRPVFGGRGRKVIGTLEAH 654
            EKLQLA  KFKPI+L DLWIRPVFGGRGRK+ G+LEAH
Sbjct: 664  EKLQLASTKFKPIKLYDLWIRPVFGGRGRKLTGSLEAH 701


>emb|CBI39650.3| unnamed protein product [Vitis vinifera]
          Length = 721

 Score =  368 bits (945), Expect = e-100
 Identities = 179/208 (86%), Positives = 200/208 (96%)
 Frame = +1

Query: 34  ELRRQHQAELARQKNEETARRLTGGDSGAVDNRGAMKSSGDLVAYKNVNDLPPPRGLLIQ 213
           +LRRQHQAELARQKNEETARRL GG SGA DNRGA+K++GDL+AYKNVNDLPPP+ L+IQ
Sbjct: 212 KLRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVNDLPPPKELMIQ 271

Query: 214 IDQKNEAILLPIYGSMVPFHVATVKSVTSQQDTSRTCYIRIIFNVPGTPFNPHDSNTLKF 393
           +DQKNEAILLPIYGSMVPFHVATVKSV+SQQDT+RTCYIRIIFNVPGTPF+PHDSN++KF
Sbjct: 272 VDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRTCYIRIIFNVPGTPFSPHDSNSMKF 331

Query: 394 QGSIYVKEVSFRSRDPRHSSEVVQLIKTLRRQVASRESERAERATLVTQEKLQLAGAKFK 573
           QGSIY+KEVSFRS+DPRH SEVVQ+IKTLRRQVASRESERAERATLVTQEKLQLAG +FK
Sbjct: 332 QGSIYLKEVSFRSKDPRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFK 391

Query: 574 PIRLSDLWIRPVFGGRGRKVIGTLEAHS 657
           PIRLSDLWIRP FGGRGRK+ G+LE+H+
Sbjct: 392 PIRLSDLWIRPSFGGRGRKLTGSLESHT 419


>emb|CBI39651.3| unnamed protein product [Vitis vinifera]
          Length = 977

 Score =  364 bits (935), Expect = 7e-99
 Identities = 182/218 (83%), Positives = 198/218 (90%)
 Frame = +1

Query: 1    LRSVNQEMSKEELRRQHQAELARQKNEETARRLTGGDSGAVDNRGAMKSSGDLVAYKNVN 180
            LRS NQE+SKEELRRQHQAELARQKNEETARRL GG S A DN GA K+S DL+AYKNVN
Sbjct: 369  LRSDNQEISKEELRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLIAYKNVN 428

Query: 181  DLPPPRGLLIQIDQKNEAILLPIYGSMVPFHVATVKSVTSQQDTSRTCYIRIIFNVPGTP 360
            D+PPPR  +IQIDQKNEAILLPIYGS+VPFHV TV++VTSQQDT+RTCYIRIIFNVPGT 
Sbjct: 429  DVPPPRDCMIQIDQKNEAILLPIYGSLVPFHVGTVRTVTSQQDTNRTCYIRIIFNVPGTA 488

Query: 361  FNPHDSNTLKFQGSIYVKEVSFRSRDPRHSSEVVQLIKTLRRQVASRESERAERATLVTQ 540
            FNPHD+N+LKFQGSIY+KEVSFRS+DPRH SEVVQ IKTLRRQV +RESERAERATLVTQ
Sbjct: 489  FNPHDANSLKFQGSIYLKEVSFRSKDPRHISEVVQGIKTLRRQVVARESERAERATLVTQ 548

Query: 541  EKLQLAGAKFKPIRLSDLWIRPVFGGRGRKVIGTLEAH 654
            EKLQLAG KFKPI+L  LWIRP FGGRGRK+ GTLEAH
Sbjct: 549  EKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAH 586


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  364 bits (935), Expect = 7e-99
 Identities = 182/218 (83%), Positives = 198/218 (90%)
 Frame = +1

Query: 1    LRSVNQEMSKEELRRQHQAELARQKNEETARRLTGGDSGAVDNRGAMKSSGDLVAYKNVN 180
            LRS NQE+SKEELRRQHQAELARQKNEETARRL GG S A DN GA K+S DL+AYKNVN
Sbjct: 482  LRSDNQEISKEELRRQHQAELARQKNEETARRLAGGGSAAGDNHGASKTSSDLIAYKNVN 541

Query: 181  DLPPPRGLLIQIDQKNEAILLPIYGSMVPFHVATVKSVTSQQDTSRTCYIRIIFNVPGTP 360
            D+PPPR  +IQIDQKNEAILLPIYGS+VPFHV TV++VTSQQDT+RTCYIRIIFNVPGT 
Sbjct: 542  DVPPPRDCMIQIDQKNEAILLPIYGSLVPFHVGTVRTVTSQQDTNRTCYIRIIFNVPGTA 601

Query: 361  FNPHDSNTLKFQGSIYVKEVSFRSRDPRHSSEVVQLIKTLRRQVASRESERAERATLVTQ 540
            FNPHD+N+LKFQGSIY+KEVSFRS+DPRH SEVVQ IKTLRRQV +RESERAERATLVTQ
Sbjct: 602  FNPHDANSLKFQGSIYLKEVSFRSKDPRHISEVVQGIKTLRRQVVARESERAERATLVTQ 661

Query: 541  EKLQLAGAKFKPIRLSDLWIRPVFGGRGRKVIGTLEAH 654
            EKLQLAG KFKPI+L  LWIRP FGGRGRK+ GTLEAH
Sbjct: 662  EKLQLAGNKFKPIKLFGLWIRPPFGGRGRKLSGTLEAH 699


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