BLASTX nr result

ID: Panax21_contig00022365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022365
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat rece...   116   2e-24
ref|XP_002516434.1| serine-threonine protein kinase, plant-type,...   113   2e-23
ref|XP_002879005.1| hypothetical protein ARALYDRAFT_481544 [Arab...    94   9e-18
ref|XP_003609204.1| hypothetical protein MTR_4g113100 [Medicago ...    92   4e-17

>ref|XP_002309500.1| predicted protein [Populus trichocarpa] gi|222855476|gb|EEE93023.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LYLSHNRFSGEFPAGVSHIHRLLRLDFSYNHFSGEIXXXXXXXXXXXXXXXXXFNSFTGT 181
           LYLSHNR SG FP+G+  + RL RLD SYN+F GEI                 FNSFTG 
Sbjct: 120 LYLSHNRLSGNFPSGIHSLRRLRRLDLSYNYFYGEIPFPELAQMPRLLTLRLDFNSFTGK 179

Query: 182 LNST---PSSSLMEFDVSGNDLAGKIPDSLSKFPVTSFTGNFRLCGKPLSSNCYNRTVHS 352
           +      PS S++EF+VS N L+G+IP   S+FPV+SF+GN  LCGKPL+ +C++RTV S
Sbjct: 180 IGPFSFFPSGSILEFNVSNNFLSGEIPAIFSRFPVSSFSGNKNLCGKPLALDCFHRTVES 239

Query: 353 MPKAGGDLAQIRVGDEKMKKNLRD 424
            P   GD+        K KK + D
Sbjct: 240 EPAKPGDVGM----KNKKKKGVSD 259


>ref|XP_002279173.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g68400-like [Vitis vinifera]
          Length = 608

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   LYLSHNRFSGEFPAGVSHIHRLLRLDFSYNHFSGEIXXXXXXXXXXXXXXXXXFNSFTGT 181
           LYLS NRFSGEFPAGVS I R+ RL  S+N+FSGEI                  NSFTGT
Sbjct: 113 LYLSDNRFSGEFPAGVSSIRRIRRLVLSHNNFSGEIPMNKLTQLRHLLTLRLEENSFTGT 172

Query: 182 LNS-TPSSSLMEFDVSGNDLAGKIPDSLSKFPVTSFTGNFRLCGKPLSSNCYN 337
           L+S + SSS+ +F+VSGN+LAG+IP  LS+FP++SF  N +LCGKPL  +C N
Sbjct: 173 LSSNSSSSSIYDFNVSGNNLAGEIPAWLSQFPLSSFARNAKLCGKPLGYSCSN 225


>ref|XP_002516434.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223544254|gb|EEF45775.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 655

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   LYLSHNRFSGEFPAGVSHIHRLLRLDFSYNHFSGEIXXXXXXXXXXXXXXXXXFNSFTGT 181
           LYLS+NR SG FP+ +S + RL RLD SYNH SG I                  NSF G+
Sbjct: 125 LYLSYNRLSGPFPSAISSLKRLHRLDLSYNHLSGHIPISEISSLPLLLTLRLEDNSFDGS 184

Query: 182 LNSTP--SSSLMEFDVSGNDLAGKIPDSLSKFPVTSFTGNFRLCGKPLSSNCYNRTVHSM 355
           ++S    S S++EF+VS N L+GKIP   S+FP +SF GN  LCG+PL   C+N++VHS 
Sbjct: 185 IDSVHMLSLSVLEFNVSNNRLSGKIPAWSSRFPASSFAGNGELCGEPLPRECWNQSVHSQ 244

Query: 356 PKAGG 370
           P   G
Sbjct: 245 PVQSG 249


>ref|XP_002879005.1| hypothetical protein ARALYDRAFT_481544 [Arabidopsis lyrata subsp.
           lyrata] gi|297324844|gb|EFH55264.1| hypothetical protein
           ARALYDRAFT_481544 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/136 (41%), Positives = 73/136 (53%)
 Frame = +2

Query: 2   LYLSHNRFSGEFPAGVSHIHRLLRLDFSYNHFSGEIXXXXXXXXXXXXXXXXXFNSFTGT 181
           LYL HN FSGEFPA ++H++ L+RLD S N+F+G I                  N F+G 
Sbjct: 120 LYLQHNEFSGEFPASITHLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGN-NGFSGN 178

Query: 182 LNSTPSSSLMEFDVSGNDLAGKIPDSLSKFPVTSFTGNFRLCGKPLSSNCYNRTVHSMPK 361
           L S  S  L++F+VS N+L G IP SLS+F   SFTGN  LCG PL   C +  V   P 
Sbjct: 179 LPSI-SLDLVDFNVSNNNLNGSIPSSLSRFSAESFTGNVDLCGGPLKP-CKSFFVSPSPS 236

Query: 362 AGGDLAQIRVGDEKMK 409
               +   R+  +  K
Sbjct: 237 PSSIIPAKRLSGKNSK 252


>ref|XP_003609204.1| hypothetical protein MTR_4g113100 [Medicago truncatula]
           gi|355510259|gb|AES91401.1| hypothetical protein
           MTR_4g113100 [Medicago truncatula]
          Length = 655

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/110 (45%), Positives = 67/110 (60%)
 Frame = +2

Query: 2   LYLSHNRFSGEFPAGVSHIHRLLRLDFSYNHFSGEIXXXXXXXXXXXXXXXXXFNSFTGT 181
           +YL  N+FSGEFPA ++ + RL RLD S N+F+G I                  N+F+G+
Sbjct: 122 IYLQKNKFSGEFPASLTRLTRLTRLDLSSNNFTGSIPFSINNLTHLSGLFLEN-NTFSGS 180

Query: 182 LNSTPSSSLMEFDVSGNDLAGKIPDSLSKFPVTSFTGNFRLCGKPLSSNC 331
           L S  +++L  FDVS N+L G IP +LSKFP  SF GN  LCG PL ++C
Sbjct: 181 LPSI-TANLNGFDVSNNNLNGSIPKTLSKFPEASFAGNLDLCGPPLKTSC 229


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