BLASTX nr result

ID: Panax21_contig00022347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022347
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan pr...    77   2e-12
ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan pr...    74   2e-11
ref|XP_002532284.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_002301590.1| fasciclin-like arabinogalactan protein 12.2 ...    68   9e-10
gb|ABK93733.1| unknown [Populus trichocarpa]                           68   9e-10

>ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 2
           [Vitis vinifera] gi|225446997|ref|XP_002266986.1|
           PREDICTED: fasciclin-like arabinogalactan protein 7
           isoform 3 [Vitis vinifera]
           gi|225446999|ref|XP_002266893.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7 isoform 1
           [Vitis vinifera] gi|147823112|emb|CAN73020.1|
           hypothetical protein VITISV_004046 [Vitis vinifera]
          Length = 254

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/80 (55%), Positives = 45/80 (56%)
 Frame = -3

Query: 365 GSGWTNTKVSSSVHSTDPVAIYQVDKVLLPEAIFXXXXXXXXXXXXXXXXXXTADAPDAD 186
           GSGWTNTKVSSSVHSTDPVA+YQVDKVLLPEAIF                   ADAP A 
Sbjct: 156 GSGWTNTKVSSSVHSTDPVAVYQVDKVLLPEAIFGTDIPPTPAPAPAPDISPAADAPTAS 215

Query: 185 GGXXXXXXXXXXXXSYRIIS 126
                         SYRIIS
Sbjct: 216 DEAGSPRASSTPSSSYRIIS 235


>ref|XP_004144534.1| PREDICTED: fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus] gi|449515965|ref|XP_004165018.1| PREDICTED:
           fasciclin-like arabinogalactan protein 7-like [Cucumis
           sativus]
          Length = 255

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = -3

Query: 365 GSGWTNTKVSSSVHSTDPVAIYQVDKVLLPEAIFXXXXXXXXXXXXXXXXXXTADAP-DA 189
           GSGWTNTKVSSSVHS+DPVA+YQVDK+LLPEAIF                   ADAP D 
Sbjct: 158 GSGWTNTKVSSSVHSSDPVAVYQVDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDV 217

Query: 188 DGGXXXXXXXXXXXXSYRIISW 123
             G            S+RII+W
Sbjct: 218 IDGRAAPSSEPKPSSSHRIINW 239


>ref|XP_002532284.1| conserved hypothetical protein [Ricinus communis]
           gi|223528018|gb|EEF30099.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/59 (59%), Positives = 38/59 (64%)
 Frame = -3

Query: 362 SGWTNTKVSSSVHSTDPVAIYQVDKVLLPEAIFXXXXXXXXXXXXXXXXXXTADAPDAD 186
           SGWT TKVSSSVHSTDPVAIYQVDKVLLPEAIF                   AD+P ++
Sbjct: 164 SGWTKTKVSSSVHSTDPVAIYQVDKVLLPEAIFGTDIPPTPAPAPAPEISPVADSPSSE 222


>ref|XP_002301590.1| fasciclin-like arabinogalactan protein 12.2 [Populus trichocarpa]
           gi|222843316|gb|EEE80863.1| fasciclin-like
           arabinogalactan protein 12.2 [Populus trichocarpa]
          Length = 263

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/59 (57%), Positives = 38/59 (64%)
 Frame = -3

Query: 362 SGWTNTKVSSSVHSTDPVAIYQVDKVLLPEAIFXXXXXXXXXXXXXXXXXXTADAPDAD 186
           SGW+ TKVSSSVHSTDPVA+YQVDKVLLPEAIF                   AD+P +D
Sbjct: 165 SGWSKTKVSSSVHSTDPVAVYQVDKVLLPEAIFGADIPPAPAPAPAPETSLAADSPSSD 223


>gb|ABK93733.1| unknown [Populus trichocarpa]
          Length = 262

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/59 (61%), Positives = 39/59 (66%)
 Frame = -3

Query: 362 SGWTNTKVSSSVHSTDPVAIYQVDKVLLPEAIFXXXXXXXXXXXXXXXXXXTADAPDAD 186
           SGW+ TKVSSSVHSTDPVAIYQVDKVLLPEAIF                  TAD+P +D
Sbjct: 163 SGWSKTKVSSSVHSTDPVAIYQVDKVLLPEAIFGTNIPPTPAPAPAPDTSPTADSPTSD 221


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