BLASTX nr result

ID: Panax21_contig00022332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022332
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...   166   5e-39
ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]   164   2e-38
ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38

>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  166 bits (420), Expect = 5e-39
 Identities = 78/144 (54%), Positives = 98/144 (68%)
 Frame = +2

Query: 323 MEESVGAMIKLTSSNFSIWKPRMEDILYCKDLYDPLELKGKKPADKSEADWNKMNRKTIG 502
           ME+    MIKLTSSN+ +WK  MED LYC DL  P+E KG KP D  +A WN +NRK   
Sbjct: 1   MEKEDSGMIKLTSSNYFLWKTMMEDHLYCNDLDLPIECKGIKPDDMDDAKWNGLNRKATA 60

Query: 503 HIRQWIDQSVFHHVSQETDAHTLWTTLESMYEKKNAQNKTFVIRKIVNLKYKDGSSVSEH 682
           ++R+W+     +H+SQE D +T+W  LE  + KK+AQNK FVIR +VNLKYKDG   S H
Sbjct: 61  NVRKWVSSKSINHISQEHDCYTIWKMLEETFAKKSAQNKVFVIRDLVNLKYKDGEDASVH 120

Query: 683 MSEFQGLVNQLSTMKLNLDDEIQA 754
           ++ FQG  NQLS M L L DE+QA
Sbjct: 121 INIFQGFFNQLSLMNLELADEMQA 144


>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  164 bits (416), Expect = 1e-38
 Identities = 76/144 (52%), Positives = 99/144 (68%)
 Frame = +2

Query: 323 MEESVGAMIKLTSSNFSIWKPRMEDILYCKDLYDPLELKGKKPADKSEADWNKMNRKTIG 502
           ME+    MIKLTSSN+ +WK  MED LYC DL  P+E KG KP D  +A WN +NRK   
Sbjct: 1   MEKEDSGMIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPNDMDDAKWNGLNRKATA 60

Query: 503 HIRQWIDQSVFHHVSQETDAHTLWTTLESMYEKKNAQNKTFVIRKIVNLKYKDGSSVSEH 682
           ++R+W+     +H+SQE D +T+W  LE  + K++AQNK FVIR +VNLKY+DG   S H
Sbjct: 61  NVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGEDASVH 120

Query: 683 MSEFQGLVNQLSTMKLNLDDEIQA 754
           ++ FQG +NQLS M L L DE+QA
Sbjct: 121 INVFQGFLNQLSLMNLELADEMQA 144


>ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|222845632|gb|EEE83179.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  164 bits (416), Expect = 1e-38
 Identities = 76/144 (52%), Positives = 99/144 (68%)
 Frame = +2

Query: 323 MEESVGAMIKLTSSNFSIWKPRMEDILYCKDLYDPLELKGKKPADKSEADWNKMNRKTIG 502
           ME+    MIKLTSSN+ +WK  MED LYC DL  P+E KG KP D  +A WN +NRK   
Sbjct: 1   MEKEDSGMIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATA 60

Query: 503 HIRQWIDQSVFHHVSQETDAHTLWTTLESMYEKKNAQNKTFVIRKIVNLKYKDGSSVSEH 682
           ++R+W+     +H+SQE D +T+W  LE  + K++AQNK FVIR +VNLKY+DG   S H
Sbjct: 61  NVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGEDASVH 120

Query: 683 MSEFQGLVNQLSTMKLNLDDEIQA 754
           ++ FQG +NQLS M L L DE+QA
Sbjct: 121 INVFQGFLNQLSLMNLELADEMQA 144


>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
          Length = 579

 Score =  164 bits (414), Expect = 2e-38
 Identities = 70/114 (61%), Positives = 93/114 (81%)
 Frame = +2

Query: 323 MEESVGAMIKLTSSNFSIWKPRMEDILYCKDLYDPLELKGKKPADKSEADWNKMNRKTIG 502
           MEE+   MIKL +SN+SIWK RM+DILYCK+L++P+E +G KP    E +W K+NRKT+G
Sbjct: 1   MEEASSGMIKLIASNYSIWKTRMKDILYCKELFEPIECRGYKPITTIEDEWKKLNRKTVG 60

Query: 503 HIRQWIDQSVFHHVSQETDAHTLWTTLESMYEKKNAQNKTFVIRKIVNLKYKDG 664
            IRQW+DQSVFHHV++E DA++LW  LES+YE+K  Q K F+I+++VNLKYKDG
Sbjct: 61  XIRQWVDQSVFHHVAKEVDAYSLWQKLESLYERKTTQXKAFIIKRLVNLKYKDG 114


>ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|222852805|gb|EEE90352.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  163 bits (413), Expect = 3e-38
 Identities = 75/144 (52%), Positives = 99/144 (68%)
 Frame = +2

Query: 323 MEESVGAMIKLTSSNFSIWKPRMEDILYCKDLYDPLELKGKKPADKSEADWNKMNRKTIG 502
           ME+    MIKLTSSN+ +WK  MED LYC DL  P+E KG KP D  +A WN +NRK   
Sbjct: 1   MEKEDSGMIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATA 60

Query: 503 HIRQWIDQSVFHHVSQETDAHTLWTTLESMYEKKNAQNKTFVIRKIVNLKYKDGSSVSEH 682
           ++R+W+     +H+SQE D +T+W  LE  + K++AQNK FVI+ +VNLKY+DG   S H
Sbjct: 61  NVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIKDLVNLKYRDGEDASVH 120

Query: 683 MSEFQGLVNQLSTMKLNLDDEIQA 754
           ++ FQG +NQLS M L L DE+QA
Sbjct: 121 INVFQGFLNQLSLMNLELADEMQA 144


Top