BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022310
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   131   5e-29
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   123   1e-26
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   120   9e-26
gb|AAM65969.1| unknown [Arabidopsis thaliana]                         119   2e-25
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/125 (54%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
 Frame = -1

Query: 370 ASKRDVKGFFRQ--TKKSGGIXXXXXXXXXXXXXXXXXXXKHAASLGSGTAQHPVLISHG 197
           AS  D+K F+RQ  T K+G                     KHAA++GS   Q   LISHG
Sbjct: 4   ASPNDMKSFYRQKKTNKTG-------ITKSSSKSKKKSPPKHAAAIGSNITQPTALISHG 56

Query: 196 GSLDLQEDYDGNEEVLRQFDMNMAYGPCVGMTRIARWERASKLGMNPPSDVERLLRAGKV 17
           G+LDLQ+DYD NEEVLRQFDMNMAYGPC+GMTR+ RWERA +LG+NPP  +E LL+ GKV
Sbjct: 57  GALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKV 116

Query: 16  RGDSL 2
             + L
Sbjct: 117 NSECL 121


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
 Frame = -1

Query: 373 MASKRDVKGFFRQTKKS--GGIXXXXXXXXXXXXXXXXXXXKHAASLGSGTAQHPVLISH 200
           MA+K ++KGF++QTK +  GGI                    HAA+ GS   Q   LISH
Sbjct: 1   MATK-NLKGFYKQTKSNITGGISKSKPSSRKVTPK-------HAAAQGSDVIQPAALISH 52

Query: 199 GGSLDLQEDYDGNEEVLRQFDMNMAYGPCVGMTRIARWERASKLGMNPPSDVERLLRAGK 20
           G SLDL EDYD  EE+LRQFDMN+AYGPC+GMTR+ RWERA +LGMNPP+++E+LL+ GK
Sbjct: 53  G-SLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGK 111

Query: 19  VRGDSL 2
           V+ D L
Sbjct: 112 VQQDCL 117


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -1

Query: 361 RDVKGFFRQTKKS--GGIXXXXXXXXXXXXXXXXXXXKHAASLGSGTAQHPVLISHGGSL 188
           +++KGF++QTK +  GGI                    HAA+ GS   Q   LISHG S+
Sbjct: 6   KNLKGFYKQTKSNITGGISKSKPSSRKVAPK-------HAAAQGSDVTQPAALISHG-SV 57

Query: 187 DLQEDYDGNEEVLRQFDMNMAYGPCVGMTRIARWERASKLGMNPPSDVERLLRAGKVRGD 8
           DL EDYD  EE+LRQFDMN+ YGPC+GMTR+ RWERA +LGMNPP+++E+LL+ GKV+ D
Sbjct: 58  DLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQD 117

Query: 7   SL 2
            L
Sbjct: 118 CL 119


>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -1

Query: 361 RDVKGFFRQTKKS--GGIXXXXXXXXXXXXXXXXXXXKHAASLGSGTAQHPVLISHGGSL 188
           +++KGF++QTK +  GGI                    HAA+ GS   Q   LISHG S+
Sbjct: 6   KNLKGFYKQTKSNITGGISKSKPSSRKVAPK-------HAAAQGSDVTQPAALISHG-SV 57

Query: 187 DLQEDYDGNEEVLRQFDMNMAYGPCVGMTRIARWERASKLGMNPPSDVERLLRAGKVRGD 8
           DL EDYD  EE+LRQFDMN+ YGPC+GMTR+ RW+RA +LGMNPP+++E+LL+ GKV+ D
Sbjct: 58  DLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQQD 117

Query: 7   SL 2
            L
Sbjct: 118 CL 119


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/118 (50%), Positives = 76/118 (64%)
 Frame = -1

Query: 355 VKGFFRQTKKSGGIXXXXXXXXXXXXXXXXXXXKHAASLGSGTAQHPVLISHGGSLDLQE 176
           +KGF+RQ K   GI                    HAA+LGS   Q   L+SH  S DL++
Sbjct: 8   MKGFYRQKKNKSGIRKPTSTSKSSLI--------HAATLGSDITQPTALVSHD-SPDLKD 58

Query: 175 DYDGNEEVLRQFDMNMAYGPCVGMTRIARWERASKLGMNPPSDVERLLRAGKVRGDSL 2
           DYD +E+VLRQFDMN AYGPC+GM+R+ARWERA +LG+NPP ++E LL+  KVR + L
Sbjct: 59  DYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECL 116