BLASTX nr result

ID: Panax21_contig00022306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022306
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330690.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
ref|XP_002524858.1| conserved hypothetical protein [Ricinus comm...    66   8e-09
ref|XP_002462669.1| hypothetical protein SORBIDRAFT_02g029940 [S...    57   3e-06
dbj|BAD33829.1| unknown protein [Oryza sativa Japonica Group]          57   4e-06
ref|NP_001063677.1| Os09g0517000 [Oryza sativa Japonica Group] g...    57   4e-06

>ref|XP_002330690.1| predicted protein [Populus trichocarpa] gi|222872294|gb|EEF09425.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = -3

Query: 315 KNAAAHHLPSLGFHRVRS---SAQPPQDCRLVHRRTTTXXXXXXXXXXXXXGDXXXXXXX 145
           K+     +PS GF RVR+    ++P  D +LVHRRT               G        
Sbjct: 19  KSKKTSPVPSPGFQRVRACHGDSKPFSDNKLVHRRTIALGLAGALTGLNIGG-WNANAAA 77

Query: 144 XXXXXXXXAEKKDPGVNALTAKVLASKKRKEALKESIAKLREKGKVI 4
                    EKKDP ++ L AKVLASKKRKEA+KE +A++REKGK +
Sbjct: 78  RRPPPPPPGEKKDPSISGLQAKVLASKKRKEAMKEEVARIREKGKAV 124


>ref|XP_002524858.1| conserved hypothetical protein [Ricinus communis]
           gi|223535821|gb|EEF37482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 43/102 (42%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
 Frame = -3

Query: 297 HLPSLGFHRV---RSSAQPPQDCRLVHR-RTTTXXXXXXXXXXXXXGDXXXXXXXXXXXX 130
           H+ SLGF  +      ++P     LVHR R T                            
Sbjct: 27  HVASLGFQGLLAHHKDSKPASHSNLVHRSRRTVTLGLASGLLLGLTVGEGSANAARRQAP 86

Query: 129 XXXAEKKDPGVNALTAKVLASKKRKEALKESIAKLREKGKVI 4
               EKKDP V+ + AKVLASKKRKEA+KESIAKLREKGKV+
Sbjct: 87  PPPEEKKDPNVSGVQAKVLASKKRKEAMKESIAKLREKGKVV 128


>ref|XP_002462669.1| hypothetical protein SORBIDRAFT_02g029940 [Sorghum bicolor]
           gi|241926046|gb|EER99190.1| hypothetical protein
           SORBIDRAFT_02g029940 [Sorghum bicolor]
          Length = 116

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -3

Query: 117 EKKDPGVNALTAKVLASKKRKEALKESIAKLREKGKVI 4
           EKKDP V+ + AKVLAS+KRKEA+KE++AKLRE+GK +
Sbjct: 77  EKKDPNVSGVQAKVLASRKRKEAMKEAVAKLRERGKPV 114


>dbj|BAD33829.1| unknown protein [Oryza sativa Japonica Group]
          Length = 106

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -3

Query: 117 EKKDPGVNALTAKVLASKKRKEALKESIAKLREKGKVIT 1
           E+KDP V+ + AKVLASKKRKEA+KE +AK+REKGK ++
Sbjct: 67  ERKDPSVSGVQAKVLASKKRKEAMKEFVAKMREKGKPVS 105


>ref|NP_001063677.1| Os09g0517000 [Oryza sativa Japonica Group]
           gi|113631910|dbj|BAF25591.1| Os09g0517000 [Oryza sativa
           Japonica Group] gi|215695344|dbj|BAG90535.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218202462|gb|EEC84889.1| hypothetical protein
           OsI_32050 [Oryza sativa Indica Group]
           gi|222641923|gb|EEE70055.1| hypothetical protein
           OsJ_30020 [Oryza sativa Japonica Group]
          Length = 120

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -3

Query: 117 EKKDPGVNALTAKVLASKKRKEALKESIAKLREKGKVIT 1
           E+KDP V+ + AKVLASKKRKEA+KE +AK+REKGK ++
Sbjct: 81  ERKDPSVSGVQAKVLASKKRKEAMKEFVAKMREKGKPVS 119


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