BLASTX nr result

ID: Panax21_contig00022298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022298
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...   144   1e-51
emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]   144   1e-51
ref|XP_004152832.1| PREDICTED: probable U3 small nucleolar RNA-a...   140   3e-47
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...   144   4e-46
ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-45

>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
           [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
           gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
           unknown protein / putative CGI-94 protein [Vitis
           vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
           product [Vitis vinifera]
          Length = 229

 Score =  144 bits (364), Expect(2) = 1e-51
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +1

Query: 1   RKKFGLLKKHKDYVVHAKAYDKKEDALRKLKEKAAFRNPDEFYFKMINTKTVNGVHKLET 180
           RKKFGLL+KHKDYVV A+A+ KKE+AL+KLKEKAAFRNPDEFYFKMI T+TV+GVH+ E+
Sbjct: 22  RKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNPDEFYFKMIKTRTVDGVHRPES 81

Query: 181 EANKYTQEELMLMKTQDIGYVMQKVQ 258
           +ANKY+ EELMLMKTQD+GYV+QKVQ
Sbjct: 82  QANKYSPEELMLMKTQDMGYVLQKVQ 107



 Score = 83.6 bits (205), Expect(2) = 1e-51
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 KKIEKLTAMLHSLDNQPSNRHVYFAEDRADAEEISLQISKGGNVASSKDLPDRIK 508
           KKIEKLTAMLHSLDNQP+NRHVY+AEDR +A EI  Q S+GGN+ S  D+P+ IK
Sbjct: 111 KKIEKLTAMLHSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIK 165


>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score =  144 bits (364), Expect(2) = 1e-51
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +1

Query: 1   RKKFGLLKKHKDYVVHAKAYDKKEDALRKLKEKAAFRNPDEFYFKMINTKTVNGVHKLET 180
           RKKFGLL+KHKDYVV A+A+ KKE+AL+KLKEKAAFRNPDEFYFKMI T+TV+GVH+ E+
Sbjct: 22  RKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNPDEFYFKMIKTRTVDGVHRPES 81

Query: 181 EANKYTQEELMLMKTQDIGYVMQKVQ 258
           +ANKY+ EELMLMKTQD+GYV+QKVQ
Sbjct: 82  QANKYSPEELMLMKTQDMGYVLQKVQ 107



 Score = 83.6 bits (205), Expect(2) = 1e-51
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 KKIEKLTAMLHSLDNQPSNRHVYFAEDRADAEEISLQISKGGNVASSKDLPDRIK 508
           KKIEKLTAMLHSLDNQP+NRHVY+AEDR +A EI  Q S+GGN+ S  D+P+ IK
Sbjct: 111 KKIEKLTAMLHSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIK 165


>ref|XP_004152832.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Cucumis sativus]
           gi|449477691|ref|XP_004155095.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 11-like [Cucumis
           sativus]
          Length = 228

 Score =  140 bits (354), Expect(2) = 3e-47
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = +1

Query: 1   RKKFGLLKKHKDYVVHAKAYDKKEDALRKLKEKAAFRNPDEFYFKMINTKTVNGVHKLET 180
           RKKFGLL+KHKDY+  AKA+ KKED LRKLKEKAAF+NPDEFYFKMI T+TV+GVHK E+
Sbjct: 22  RKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPES 81

Query: 181 EANKYTQEELMLMKTQDIGYVMQKVQ 258
             NKYT E+LMLMKTQD GY++QK+Q
Sbjct: 82  HVNKYTAEQLMLMKTQDAGYILQKMQ 107



 Score = 72.8 bits (177), Expect(2) = 3e-47
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +2

Query: 344 KKIEKLTAMLHSLDNQPSNRHVYFAEDRADAEEISLQISKGGNVASSKDLPDRIK 508
           KKIEKLTA LHSLDNQPSN+H+YFAEDR +A EI  + SK G VASS+ +PD I+
Sbjct: 111 KKIEKLTATLHSLDNQPSNKHLYFAEDREEANEILSRSSK-GLVASSEAVPDSIR 164


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score =  144 bits (364), Expect(2) = 4e-46
 Identities = 65/86 (75%), Positives = 82/86 (95%)
 Frame = +1

Query: 1   RKKFGLLKKHKDYVVHAKAYDKKEDALRKLKEKAAFRNPDEFYFKMINTKTVNGVHKLET 180
           RKK+GLL+KHKDY+V AKA+ KKE+AL++LKEKAAFRNPDEFYFKMI T+TV+GVH+ E+
Sbjct: 22  RKKYGLLEKHKDYIVRAKAFHKKEEALQRLKEKAAFRNPDEFYFKMIKTRTVDGVHRPES 81

Query: 181 EANKYTQEELMLMKTQDIGYVMQKVQ 258
           +ANKYT+EEL+LMKTQDIGY++QK+Q
Sbjct: 82  QANKYTEEELLLMKTQDIGYILQKLQ 107



 Score = 65.5 bits (158), Expect(2) = 4e-46
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = +2

Query: 344 KKIEKLTAMLHSLDNQPSNRHVYFAEDRADAEEISLQISKGGNVASSKDLPDRIK 508
           KKIEKLTA LHSL NQPSNRH+Y+ EDR +A+E+  Q S    V + + +P++IK
Sbjct: 111 KKIEKLTATLHSLKNQPSNRHIYYVEDREEAKELRSQSSANEIVPALEHVPEQIK 165


>ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|222867208|gb|EEF04339.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  139 bits (350), Expect(2) = 2e-45
 Identities = 65/86 (75%), Positives = 77/86 (89%)
 Frame = +1

Query: 1   RKKFGLLKKHKDYVVHAKAYDKKEDALRKLKEKAAFRNPDEFYFKMINTKTVNGVHKLET 180
           RKKFGLL+KHKDYV  AKA+ KKE+ LR+LKEKAA RNPDEFYF MI +KTV+GVH+ ++
Sbjct: 22  RKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNPDEFYFGMIKSKTVDGVHRPQS 81

Query: 181 EANKYTQEELMLMKTQDIGYVMQKVQ 258
           EANKYTQEEL+LMKTQDIGY++QK Q
Sbjct: 82  EANKYTQEELLLMKTQDIGYILQKAQ 107



 Score = 68.2 bits (165), Expect(2) = 2e-45
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = +2

Query: 344 KKIEKLTAMLHSLDNQPSNRHVYFAEDRADAEEISLQISKGGNVASSKDLPDRIK 508
           KKIEKLTA LHSLD +PS++H+YFAEDR +A+EI  + S+     +S D+PD IK
Sbjct: 111 KKIEKLTATLHSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIK 165


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