BLASTX nr result
ID: Panax21_contig00022293
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022293 (579 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 78 1e-12 ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 77 2e-12 ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra... 74 2e-11 ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra... 74 2e-11 >ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP, putative [Ricinus communis] Length = 2264 Score = 77.8 bits (190), Expect = 1e-12 Identities = 49/110 (44%), Positives = 55/110 (50%) Frame = -1 Query: 558 PPQRNPATSLRTAANGPGKNKPSPLLQDLDMEIDPWTLLEDGAESXXXXXXXXXXXXXXX 379 PPQ+NP RT N PG++K PL QD DMEIDPWTLLEDG S Sbjct: 2176 PPQKNPLPLARTT-NVPGRSKSLPLQQDNDMEIDPWTLLEDGTGS--------------- 2219 Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXASTLLKGAVRVRRMDLTYIGSVDEDS 229 AS LKGAVRVRR DLTYIG+VD+D+ Sbjct: 2220 -----GPSSSNAAVVSGGDHANLRASAWLKGAVRVRRTDLTYIGAVDDDN 2264 >ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera] Length = 2272 Score = 77.0 bits (188), Expect = 2e-12 Identities = 49/116 (42%), Positives = 58/116 (50%) Frame = -1 Query: 576 HPGNINPPQRNPATSLRTAANGPGKNKPSPLLQDLDMEIDPWTLLEDGAESXXXXXXXXX 397 HPGN N QRN ++ +R PGK K PL QD D+EIDPWTLLEDGA + Sbjct: 2182 HPGNTNQSQRNSSSLVR-----PGKLKNMPLQQDHDIEIDPWTLLEDGAGA--------- 2227 Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTLLKGAVRVRRMDLTYIGSVDEDS 229 AS+ L+G VRVRR DLTYIG+VD+DS Sbjct: 2228 -----------GPSSGNTAVIGSGDHANLRASSWLRGTVRVRRTDLTYIGAVDDDS 2272 >ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|222861569|gb|EEE99111.1| predicted protein [Populus trichocarpa] Length = 367 Score = 77.0 bits (188), Expect = 2e-12 Identities = 49/108 (45%), Positives = 55/108 (50%) Frame = -1 Query: 552 QRNPATSLRTAANGPGKNKPSPLLQDLDMEIDPWTLLEDGAESXXXXXXXXXXXXXXXXX 373 Q+NPA R+A N K+KP PL QD DMEIDPWTLLEDG S Sbjct: 280 QKNPAPLARSANNISTKSKPLPLQQDGDMEIDPWTLLEDGTGS----------------- 322 Query: 372 XXXXXXXXXXXXXXXXXXXXXXASTLLKGAVRVRRMDLTYIGSVDEDS 229 AS+ LKGAVRVRR DLTYIG+VD+DS Sbjct: 323 ---GPSSSNISVIGSIDHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 367 >ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12-like [Cucumis sativus] Length = 2254 Score = 73.9 bits (180), Expect = 2e-11 Identities = 47/114 (41%), Positives = 55/114 (48%) Frame = -1 Query: 570 GNINPPQRNPATSLRTAANGPGKNKPSPLLQDLDMEIDPWTLLEDGAESXXXXXXXXXXX 391 GN + PQ + +S R + PGK+KP P QD D EIDPW LLEDGA S Sbjct: 2161 GNSSMPQGSKISSPRVVPSAPGKSKPLPPQQDHDTEIDPWLLLEDGAGS----------- 2209 Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXASTLLKGAVRVRRMDLTYIGSVDEDS 229 AS LKGAVRVRR DLTYIG++D+DS Sbjct: 2210 ---------SQSSSNSAVIGSGEHANFRASYCLKGAVRVRRTDLTYIGAMDDDS 2254 >ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12-like [Cucumis sativus] Length = 2254 Score = 73.9 bits (180), Expect = 2e-11 Identities = 47/114 (41%), Positives = 55/114 (48%) Frame = -1 Query: 570 GNINPPQRNPATSLRTAANGPGKNKPSPLLQDLDMEIDPWTLLEDGAESXXXXXXXXXXX 391 GN + PQ + +S R + PGK+KP P QD D EIDPW LLEDGA S Sbjct: 2161 GNSSMPQGSKISSPRVVPSAPGKSKPLPPQQDHDTEIDPWLLLEDGAGS----------- 2209 Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXASTLLKGAVRVRRMDLTYIGSVDEDS 229 AS LKGAVRVRR DLTYIG++D+DS Sbjct: 2210 ---------SQSSSNSAVIGSGEHANFRASYCLKGAVRVRRTDLTYIGAMDDDS 2254