BLASTX nr result
ID: Panax21_contig00022284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022284
(1736 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 664 0.0
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera] 636 e-180
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat... 628 e-177
emb|CBI26532.3| unnamed protein product [Vitis vinifera] 620 e-175
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 616 e-174
>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 664 bits (1714), Expect = 0.0
Identities = 318/454 (70%), Positives = 386/454 (85%)
Frame = +2
Query: 233 RLSTKLLNICIASLCKTQQLLKAEAVIIDGIRLGVLPDVVSYNTLISAYCRFIGLDEGYS 412
R STKLLNICIASLCK QL KAEAV+IDGIRLG+LPDVV+YNTL+SAY RF+G+D YS
Sbjct: 4 RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63
Query: 413 VLHRMREAGIYPNVITYNSLMAGAARRCLLSRSFDLFDEMLQKGILPDAWSYNTLMHCFF 592
V+HRM+EAGI P+VITYNSL+A A +RCLLSRS DLF+EML+ GI PD WSYN+LMHCFF
Sbjct: 64 VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123
Query: 593 RLGKPDEANRFFQDIILNNIPPHAATFNILINGLCKNGYSNNALTLFRNLQRGGFVPEIV 772
+LGKPDEANR FQDIIL N+ P ++TFNI+INGLC NGY+ AL+L+R LQR GFVPE+V
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV 183
Query: 773 TYNILINGLCKSGRLGAARKILKELGESGRVPNAITYTTVMKCCFRSNKFDEGLEIFSEM 952
TYNILINGLCKS +L AAR+IL+ELGESG VP+AITYTTVMKCCFRS +F++G EIFSEM
Sbjct: 184 TYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEM 243
Query: 953 KRNGHTFDAFAYCTVSGALIKAGRIKDAIECFGHLVTNGIELDIVYYNTLINLYCQEGKL 1132
K G+ FDAF+YC V AL K GR+++A + + + I+LDIV YNT++NLYC+ GKL
Sbjct: 244 KSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKL 303
Query: 1133 EYVYKLLDEIEKDGLECDKYTHTILIDGLCKAGNIEGALRHLRYMNIMGFDSNLVAYNCL 1312
E YKLLDEIE+ GLECD+YTHTILIDGLCKAGN+EGALRHL+ M MGFDS LVA NC+
Sbjct: 304 EATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCV 363
Query: 1313 IDRLCKAGHIDHAMKLFESMELKDSFTYTSLVHNLCIARRFRCASKLLLSCLRGNTRVFK 1492
ID LCK G +DHA+K+F SME+KDSFTY+S+VHNLC ARR+R AS+LLL+CLRG ++ +
Sbjct: 364 IDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILR 423
Query: 1493 SVKRAVVDGLRCSGFTCEARKLKSKI*LAKIMNY 1594
+ +R+V+DGL SG+T EAR+LKSKI LA+I++Y
Sbjct: 424 ANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 457
>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 636 bits (1640), Expect = e-180
Identities = 302/429 (70%), Positives = 365/429 (85%)
Frame = +2
Query: 233 RLSTKLLNICIASLCKTQQLLKAEAVIIDGIRLGVLPDVVSYNTLISAYCRFIGLDEGYS 412
R STKLLNICIASLCK QL KAEAV+IDGIRLG+LPDVV+YNTL+SAY RF+G+D YS
Sbjct: 4 RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63
Query: 413 VLHRMREAGIYPNVITYNSLMAGAARRCLLSRSFDLFDEMLQKGILPDAWSYNTLMHCFF 592
V+HRM+EAGI P+VITYNSL+A A +RCLLSRS DLF+EML+ GI PD WSYN+LMHCFF
Sbjct: 64 VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFF 123
Query: 593 RLGKPDEANRFFQDIILNNIPPHAATFNILINGLCKNGYSNNALTLFRNLQRGGFVPEIV 772
+LGKPDEANR FQDIIL N+ P ++TFNI+INGLC NGY+ AL+L+R LQR GFVPE+V
Sbjct: 124 KLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV 183
Query: 773 TYNILINGLCKSGRLGAARKILKELGESGRVPNAITYTTVMKCCFRSNKFDEGLEIFSEM 952
TYNILINGLCKS +L AAR+IL+ELGESG VP+AITYTTVMKCCFRS +F++G EIFSEM
Sbjct: 184 TYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEM 243
Query: 953 KRNGHTFDAFAYCTVSGALIKAGRIKDAIECFGHLVTNGIELDIVYYNTLINLYCQEGKL 1132
K G+ FDAF+YC V AL K GR+++A + + + I+LDIV YNT++NLYC+ GKL
Sbjct: 244 KSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKL 303
Query: 1133 EYVYKLLDEIEKDGLECDKYTHTILIDGLCKAGNIEGALRHLRYMNIMGFDSNLVAYNCL 1312
E YKLLDEIE+ GLECD+YTHTILIDGLCKAGN+EGALRHL+ M MGFDS LVA NC+
Sbjct: 304 EATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCV 363
Query: 1313 IDRLCKAGHIDHAMKLFESMELKDSFTYTSLVHNLCIARRFRCASKLLLSCLRGNTRVFK 1492
ID LCK G +DHA+K+F SME+KDSFTY+S+VHNLC ARR+R AS+LLL+CLRG ++ +
Sbjct: 364 IDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILR 423
Query: 1493 SVKRAVVDG 1519
+ +R+V+DG
Sbjct: 424 ANQRSVIDG 432
>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 628 bits (1620), Expect = e-177
Identities = 302/450 (67%), Positives = 361/450 (80%)
Frame = +2
Query: 233 RLSTKLLNICIASLCKTQQLLKAEAVIIDGIRLGVLPDVVSYNTLISAYCRFIGLDEGYS 412
+ STK LNIC+AS CK+QQ+ KAEAVIIDGIR+GVLPDVV+YNTLI YCRF G+D YS
Sbjct: 4 KYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYS 63
Query: 413 VLHRMREAGIYPNVITYNSLMAGAARRCLLSRSFDLFDEMLQKGILPDAWSYNTLMHCFF 592
VL+RMREAGI P+VITYNSL+AGA R L +S DLF+EMLQ GI PD WSYNTLMHCFF
Sbjct: 64 VLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFF 123
Query: 593 RLGKPDEANRFFQDIILNNIPPHAATFNILINGLCKNGYSNNALTLFRNLQRGGFVPEIV 772
LGKPDEA R F+DIIL ++ PH TFN +INGLCK+GY++NA+ LFRNLQR GF+P++V
Sbjct: 124 ILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLV 183
Query: 773 TYNILINGLCKSGRLGAARKILKELGESGRVPNAITYTTVMKCCFRSNKFDEGLEIFSEM 952
TYNILINGLCK RL AA ++L E +SG PNA+TYTT+MK CFRS +++ G EIFS+M
Sbjct: 184 TYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKM 243
Query: 953 KRNGHTFDAFAYCTVSGALIKAGRIKDAIECFGHLVTNGIELDIVYYNTLINLYCQEGKL 1132
K G+ FD FAYCTVSGA +K GR ++A C ++ N + +DI +YNT INLYC+EGKL
Sbjct: 244 KNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKL 303
Query: 1133 EYVYKLLDEIEKDGLECDKYTHTILIDGLCKAGNIEGALRHLRYMNIMGFDSNLVAYNCL 1312
E YKL DEIE GLECD YTH+I+ +GLC+ GNIEGA++HL + GF SNLVA NCL
Sbjct: 304 EAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCL 363
Query: 1313 IDRLCKAGHIDHAMKLFESMELKDSFTYTSLVHNLCIARRFRCASKLLLSCLRGNTRVFK 1492
IDRLCKAG ID A++LFESME +DSFTYTSLVHNLC ARRFRCASKLL+SC R +V K
Sbjct: 364 IDRLCKAGQIDRAIRLFESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLK 423
Query: 1493 SVKRAVVDGLRCSGFTCEARKLKSKI*LAK 1582
+ +RAV+DGL SGFT EARKLK K+ LA+
Sbjct: 424 ATRRAVIDGLCSSGFTSEARKLKFKLRLAR 453
>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 620 bits (1598), Expect = e-175
Identities = 303/454 (66%), Positives = 370/454 (81%)
Frame = +2
Query: 233 RLSTKLLNICIASLCKTQQLLKAEAVIIDGIRLGVLPDVVSYNTLISAYCRFIGLDEGYS 412
R STKLLNICIASLCK QL KAEAV+IDGIRLG+LPDVV+YNTL+SAY RF+G+D YS
Sbjct: 4 RFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYS 63
Query: 413 VLHRMREAGIYPNVITYNSLMAGAARRCLLSRSFDLFDEMLQKGILPDAWSYNTLMHCFF 592
V+HRM+EAGI P+VITYNSL+A A +RCLLSRS DLF+EML+ GI PD WSYN+LMH
Sbjct: 64 VIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHY-- 121
Query: 593 RLGKPDEANRFFQDIILNNIPPHAATFNILINGLCKNGYSNNALTLFRNLQRGGFVPEIV 772
IIL N+ P ++TFNI+INGLC NGY+ AL+L+R LQR GFVPE+V
Sbjct: 122 --------------IILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELV 167
Query: 773 TYNILINGLCKSGRLGAARKILKELGESGRVPNAITYTTVMKCCFRSNKFDEGLEIFSEM 952
TYNILINGLCKS +L AAR+IL+ELGESG VP+AITYTTVMKCCFRS +F++G EIFSEM
Sbjct: 168 TYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEM 227
Query: 953 KRNGHTFDAFAYCTVSGALIKAGRIKDAIECFGHLVTNGIELDIVYYNTLINLYCQEGKL 1132
K G+ FDAF+YC V AL K GR+++A + + + I+LDIV YNT++NLYC+ GKL
Sbjct: 228 KSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKL 287
Query: 1133 EYVYKLLDEIEKDGLECDKYTHTILIDGLCKAGNIEGALRHLRYMNIMGFDSNLVAYNCL 1312
E YKLLDEIE+ GLECD+YTHTILIDGLCKAGN+EGALRHL+ M MGFDS LVA NC+
Sbjct: 288 EATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQNCV 347
Query: 1313 IDRLCKAGHIDHAMKLFESMELKDSFTYTSLVHNLCIARRFRCASKLLLSCLRGNTRVFK 1492
ID LCK G +DHA+K+F SME+KDSFTY+S+VHNLC ARR+R AS+LLL+CLRG ++ +
Sbjct: 348 IDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMKILR 407
Query: 1493 SVKRAVVDGLRCSGFTCEARKLKSKI*LAKIMNY 1594
+ +R+V+DGL SG+T EAR+LKSKI LA+I++Y
Sbjct: 408 ANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 441
>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 616 bits (1589), Expect = e-174
Identities = 302/458 (65%), Positives = 369/458 (80%)
Frame = +2
Query: 221 RMDRRLSTKLLNICIASLCKTQQLLKAEAVIIDGIRLGVLPDVVSYNTLISAYCRFIGLD 400
RM RRLST+LLNI IASLCK ++L KAE+VIIDGIRLGVLPDVV+YNTLI AY RF+ +
Sbjct: 30 RMVRRLSTRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFN 89
Query: 401 EGYSVLHRMREAGIYPNVITYNSLMAGAARRCLLSRSFDLFDEMLQKGILPDAWSYNTLM 580
YS+L+RMREA I P+V+TYNSL+AGAAR CLL S +LFDEML GI+PD WSYNTLM
Sbjct: 90 AAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLM 149
Query: 581 HCFFRLGKPDEANRFFQDIILNNIPPHAATFNILINGLCKNGYSNNALTLFRNLQRGGFV 760
HCFF+LGK +EAN + I + + P TFNI+INGLCKNG+++NAL LFR+L++ GFV
Sbjct: 150 HCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFV 209
Query: 761 PEIVTYNILINGLCKSGRLGAARKILKELGESGRVPNAITYTTVMKCCFRSNKFDEGLEI 940
P+++TYNILINGLCK RL AAR +LKEL SG VPNAITYTTVMK CFRS +F +GLEI
Sbjct: 210 PQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEI 269
Query: 941 FSEMKRNGHTFDAFAYCTVSGALIKAGRIKDAIECFGHLVTNGIELDIVYYNTLINLYCQ 1120
EM G+TFD FAYCTV G LIK GR+++A E ++ NGIE D+ YNTLINLYC+
Sbjct: 270 LQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCK 329
Query: 1121 EGKLEYVYKLLDEIEKDGLECDKYTHTILIDGLCKAGNIEGALRHLRYMNIMGFDSNLVA 1300
+G LE Y+LLDEIEK+GL+CD+YTHTILI+ +CKAGNI GA RH+++MN+MGFDS LVA
Sbjct: 330 QGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVA 389
Query: 1301 YNCLIDRLCKAGHIDHAMKLFESMELKDSFTYTSLVHNLCIARRFRCASKLLLSCLRGNT 1480
NC++D LCK G IDHA+KLFESM+++DSFTY+SLVHNLC RF ASKLLLSCLR
Sbjct: 390 LNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGM 449
Query: 1481 RVFKSVKRAVVDGLRCSGFTCEARKLKSKI*LAKIMNY 1594
++ S +R V+ GLR SGF EARKLKSKI LA+++++
Sbjct: 450 KILPSAQRVVISGLRYSGFQKEARKLKSKIKLARMLHH 487