BLASTX nr result
ID: Panax21_contig00022281
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00022281 (509 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana... 214 5e-54 ref|NP_195548.6| Patched family protein [Arabidopsis thaliana] g... 214 5e-54 ref|XP_003545057.1| PREDICTED: niemann-Pick C1 protein-like [Gly... 211 5e-53 ref|XP_002312804.1| cholesterol transport protein [Populus trich... 208 3e-52 ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vi... 207 7e-52 >ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana] gi|332661517|gb|AEE86917.1| Patched family protein [Arabidopsis thaliana] Length = 1297 Score = 214 bits (546), Expect = 5e-54 Identities = 107/170 (62%), Positives = 125/170 (73%), Gaps = 1/170 (0%) Frame = +1 Query: 1 LNLFCELSCSPRQSLFINVTSVSEVNGSLTVDGIDYFITDTFGEGLYDSCKEVKFGTMNT 180 LNLFCELSCSP QSLFINVTSV+EV+G+LTVDGIDY ITDTFGEGLY+SCKEVKFGTMNT Sbjct: 115 LNLFCELSCSPNQSLFINVTSVAEVSGNLTVDGIDYHITDTFGEGLYESCKEVKFGTMNT 174 Query: 181 RAIEFVGAGAENFKEWFAFLGLQADLGLPGSPYAINFRSSTPELSVMEHMNVSTYSCGDT 360 RAI FVG GA+NF+EWF F+G +A G PGSPYAINF+SS PE S M MNVS YSCGDT Sbjct: 175 RAINFVGGGAKNFREWFTFIGQKAPSGFPGSPYAINFKSSIPESSAMVPMNVSVYSCGDT 234 Query: 361 SLG-XXXXXXXXXXXXXXXXXXXXXXXXXXFRIGFLEVKCVDMALVILYV 507 SLG RIG L+V+C+++++ ++YV Sbjct: 235 SLGCSCGDCPSSPACSSPEPLPPHDEDSCSIRIGPLKVRCIELSMALVYV 284 >ref|NP_195548.6| Patched family protein [Arabidopsis thaliana] gi|332661516|gb|AEE86916.1| Patched family protein [Arabidopsis thaliana] Length = 1273 Score = 214 bits (546), Expect = 5e-54 Identities = 107/170 (62%), Positives = 125/170 (73%), Gaps = 1/170 (0%) Frame = +1 Query: 1 LNLFCELSCSPRQSLFINVTSVSEVNGSLTVDGIDYFITDTFGEGLYDSCKEVKFGTMNT 180 LNLFCELSCSP QSLFINVTSV+EV+G+LTVDGIDY ITDTFGEGLY+SCKEVKFGTMNT Sbjct: 115 LNLFCELSCSPNQSLFINVTSVAEVSGNLTVDGIDYHITDTFGEGLYESCKEVKFGTMNT 174 Query: 181 RAIEFVGAGAENFKEWFAFLGLQADLGLPGSPYAINFRSSTPELSVMEHMNVSTYSCGDT 360 RAI FVG GA+NF+EWF F+G +A G PGSPYAINF+SS PE S M MNVS YSCGDT Sbjct: 175 RAINFVGGGAKNFREWFTFIGQKAPSGFPGSPYAINFKSSIPESSAMVPMNVSVYSCGDT 234 Query: 361 SLG-XXXXXXXXXXXXXXXXXXXXXXXXXXFRIGFLEVKCVDMALVILYV 507 SLG RIG L+V+C+++++ ++YV Sbjct: 235 SLGCSCGDCPSSPACSSPEPLPPHDEDSCSIRIGPLKVRCIELSMALVYV 284 >ref|XP_003545057.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max] Length = 1328 Score = 211 bits (537), Expect = 5e-53 Identities = 103/169 (60%), Positives = 123/169 (72%) Frame = +1 Query: 1 LNLFCELSCSPRQSLFINVTSVSEVNGSLTVDGIDYFITDTFGEGLYDSCKEVKFGTMNT 180 LNLFCELSCSP QSLFINVTS+SEVNG++TVDGIDY+IT+TFGEGLY+SCK+VKFGTMNT Sbjct: 155 LNLFCELSCSPNQSLFINVTSISEVNGNMTVDGIDYYITETFGEGLYESCKDVKFGTMNT 214 Query: 181 RAIEFVGAGAENFKEWFAFLGLQADLGLPGSPYAINFRSSTPELSVMEHMNVSTYSCGDT 360 RAI+FVGAGA NFKEWFAFLG + G PGSPY+I F+++ + S M+ MN S YSC DT Sbjct: 215 RAIDFVGAGASNFKEWFAFLGQKVPPGFPGSPYSILFKTTILDSSPMKLMNASVYSCNDT 274 Query: 361 SLGXXXXXXXXXXXXXXXXXXXXXXXXXXFRIGFLEVKCVDMALVILYV 507 SLG RIG L+V+CVD ++ ILY+ Sbjct: 275 SLGCSCGDCPSSPVCSGSEPSPPRKDPCSIRIGSLKVRCVDFSMAILYI 323 >ref|XP_002312804.1| cholesterol transport protein [Populus trichocarpa] gi|222849212|gb|EEE86759.1| cholesterol transport protein [Populus trichocarpa] Length = 1223 Score = 208 bits (530), Expect = 3e-52 Identities = 105/170 (61%), Positives = 122/170 (71%), Gaps = 1/170 (0%) Frame = +1 Query: 1 LNLFCELSCSPRQSLFINVTSVSEVNGSLTVDGIDYFITDTFGEGLYDSCKEVKFGTMNT 180 LNLFCELSCSP QSLFINVTS+SEVNG+LTVDGI Y++TD FGE LYDSCK+VKFGTMNT Sbjct: 76 LNLFCELSCSPNQSLFINVTSISEVNGNLTVDGIAYYVTDDFGERLYDSCKDVKFGTMNT 135 Query: 181 RAIEFVGAGAENFKEWFAFLGLQADLGLPGSPYAINFRSSTPELSVMEHMNVSTYSCGDT 360 RAI+FVG GA NFKEWFAF+G +A G PGSPY I+F+S+ P+ S M MNVS YSCGDT Sbjct: 136 RAIDFVGGGANNFKEWFAFIGQKAPPGFPGSPYEIDFKSTIPDSSKMVPMNVSAYSCGDT 195 Query: 361 SLG-XXXXXXXXXXXXXXXXXXXXXXXXXXFRIGFLEVKCVDMALVILYV 507 SLG RIG L+VKC+D ++ ILY+ Sbjct: 196 SLGCSCGDCPLAPACSSSEPPSPPKKESCLIRIGPLKVKCLDFSVAILYI 245 >ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vinifera] Length = 1234 Score = 207 bits (527), Expect = 7e-52 Identities = 104/170 (61%), Positives = 125/170 (73%), Gaps = 1/170 (0%) Frame = +1 Query: 1 LNLFCELSCSPRQSLFINVTSVSEVNGSLTVDGIDYFITDTFGEGLYDSCKEVKFGTMNT 180 LNLFCELSCSP QSLFINVTS+++ N S TVDGID++++D FGEGLY+SCK+VKFGTMNT Sbjct: 76 LNLFCELSCSPNQSLFINVTSIAKGNCSSTVDGIDFYVSDAFGEGLYNSCKDVKFGTMNT 135 Query: 181 RAIEFVGAGAENFKEWFAFLGLQADLGLPGSPYAINFRSSTPELSVMEHMNVSTYSCGDT 360 RAI+F+GAGA NFKEWFAF+G QADLG+PGSPYAINF+ S PE S ME MNVS YSCGDT Sbjct: 136 RAIQFIGAGARNFKEWFAFIGQQADLGMPGSPYAINFK-SRPESSGMELMNVSIYSCGDT 194 Query: 361 SLG-XXXXXXXXXXXXXXXXXXXXXXXXXXFRIGFLEVKCVDMALVILYV 507 SLG +G ++VKC++ +L ILY+ Sbjct: 195 SLGCSCGDCPSSPVCSDYEPPSPQQKDACSISLGSVKVKCIEFSLAILYI 244