BLASTX nr result
ID: Panax21_contig00022267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00022267
(550 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arab... 186 2e-45
dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana] 183 1e-44
ref|NP_001189905.1| Topless-related protein 4 [Arabidopsis thali... 183 1e-44
dbj|BAH20292.1| AT3G15880 [Arabidopsis thaliana] 183 1e-44
dbj|BAF01694.1| putative WD-repeat protein [Arabidopsis thaliana] 183 1e-44
>ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arabidopsis lyrata subsp.
lyrata] gi|297330953|gb|EFH61372.1| hypothetical protein
ARALYDRAFT_479043 [Arabidopsis lyrata subsp. lyrata]
Length = 1136
Score = 186 bits (473), Expect = 2e-45
Identities = 84/107 (78%), Positives = 98/107 (91%)
Frame = +3
Query: 228 SNVLNILISSGADAQLCVWSMDGWEKQATKFLQIPSGRTPSPLGQTRVQFHQDQTHVLVV 407
SNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +QIPSG +P+PL TRVQFHQDQTHVLVV
Sbjct: 937 SNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQTHVLVV 996
Query: 408 HETQIAIYEAPKLECIKQWVPGESSGAITDATYSCDSQSIYACFEDG 548
H +Q+AIYEAPKLE +KQW+P ESSG++TDA YSCDSQSIYA F+DG
Sbjct: 997 HASQLAIYEAPKLESMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDG 1043
Score = 136 bits (343), Expect = 2e-30
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1
Query: 1 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNILISSGADAQLCVWSMDGWEKQATKFLQ 180
IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +Q
Sbjct: 910 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ 969
Query: 181 IPSGRTPSPLGQTRV 225
IPSG +P+PL TRV
Sbjct: 970 IPSGHSPNPLAHTRV 984
>dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]
Length = 1128
Score = 183 bits (465), Expect = 1e-44
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +3
Query: 228 SNVLNILISSGADAQLCVWSMDGWEKQATKFLQIPSGRTPSPLGQTRVQFHQDQTHVLVV 407
SNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +QIPSG +P+PL TRVQFHQDQ HVLVV
Sbjct: 931 SNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVV 990
Query: 408 HETQIAIYEAPKLECIKQWVPGESSGAITDATYSCDSQSIYACFEDG 548
H +Q+AIYEAPKLE +KQW+P ESSG++TDA YSCDSQSIYA F+DG
Sbjct: 991 HASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDG 1037
Score = 136 bits (343), Expect = 2e-30
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1
Query: 1 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNILISSGADAQLCVWSMDGWEKQATKFLQ 180
IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +Q
Sbjct: 904 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ 963
Query: 181 IPSGRTPSPLGQTRV 225
IPSG +P+PL TRV
Sbjct: 964 IPSGHSPNPLAHTRV 978
>ref|NP_001189905.1| Topless-related protein 4 [Arabidopsis thaliana]
gi|332642221|gb|AEE75742.1| Topless-related protein 4
[Arabidopsis thaliana]
Length = 1125
Score = 183 bits (465), Expect = 1e-44
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +3
Query: 228 SNVLNILISSGADAQLCVWSMDGWEKQATKFLQIPSGRTPSPLGQTRVQFHQDQTHVLVV 407
SNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +QIPSG +P+PL TRVQFHQDQ HVLVV
Sbjct: 928 SNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVV 987
Query: 408 HETQIAIYEAPKLECIKQWVPGESSGAITDATYSCDSQSIYACFEDG 548
H +Q+AIYEAPKLE +KQW+P ESSG++TDA YSCDSQSIYA F+DG
Sbjct: 988 HASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDG 1034
Score = 136 bits (343), Expect = 2e-30
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1
Query: 1 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNILISSGADAQLCVWSMDGWEKQATKFLQ 180
IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +Q
Sbjct: 901 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ 960
Query: 181 IPSGRTPSPLGQTRV 225
IPSG +P+PL TRV
Sbjct: 961 IPSGHSPNPLAHTRV 975
>dbj|BAH20292.1| AT3G15880 [Arabidopsis thaliana]
Length = 348
Score = 183 bits (465), Expect = 1e-44
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +3
Query: 228 SNVLNILISSGADAQLCVWSMDGWEKQATKFLQIPSGRTPSPLGQTRVQFHQDQTHVLVV 407
SNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +QIPSG +P+PL TRVQFHQDQ HVLVV
Sbjct: 151 SNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVV 210
Query: 408 HETQIAIYEAPKLECIKQWVPGESSGAITDATYSCDSQSIYACFEDG 548
H +Q+AIYEAPKLE +KQW+P ESSG++TDA YSCDSQSIYA F+DG
Sbjct: 211 HASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDG 257
Score = 136 bits (343), Expect = 2e-30
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1
Query: 1 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNILISSGADAQLCVWSMDGWEKQATKFLQ 180
IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +Q
Sbjct: 124 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ 183
Query: 181 IPSGRTPSPLGQTRV 225
IPSG +P+PL TRV
Sbjct: 184 IPSGHSPNPLAHTRV 198
>dbj|BAF01694.1| putative WD-repeat protein [Arabidopsis thaliana]
Length = 744
Score = 183 bits (465), Expect = 1e-44
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +3
Query: 228 SNVLNILISSGADAQLCVWSMDGWEKQATKFLQIPSGRTPSPLGQTRVQFHQDQTHVLVV 407
SNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +QIPSG +P+PL TRVQFHQDQ HVLVV
Sbjct: 547 SNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVV 606
Query: 408 HETQIAIYEAPKLECIKQWVPGESSGAITDATYSCDSQSIYACFEDG 548
H +Q+AIYEAPKLE +KQW+P ESSG++TDA YSCDSQSIYA F+DG
Sbjct: 607 HASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSCDSQSIYAAFDDG 653
Score = 136 bits (343), Expect = 2e-30
Identities = 64/75 (85%), Positives = 71/75 (94%)
Frame = +1
Query: 1 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNILISSGADAQLCVWSMDGWEKQATKFLQ 180
IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLN+L+SSGAD+QLCVWSMDGWEKQA+K +Q
Sbjct: 520 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ 579
Query: 181 IPSGRTPSPLGQTRV 225
IPSG +P+PL TRV
Sbjct: 580 IPSGHSPNPLAHTRV 594