BLASTX nr result

ID: Panax21_contig00022262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022262
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago ...    59   8e-07

>ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 33/73 (45%), Positives = 41/73 (56%)
 Frame = +1

Query: 148 MEKRQLFLRSYHFSRKQSLSERIKKSFFGXXXXXXXXXXXXXXXXXXXWFRLKHGFFFYS 327
           MEKRQLFLRSY F RK++L+ERIK S                      W RL++   FY 
Sbjct: 54  MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKKVMWLRLRSARKIRRLVWSRLRYA--FYC 111

Query: 328 TRKRKFLRLQNNN 366
            R+R+FLRL N+N
Sbjct: 112 RRRRRFLRLINHN 124


>ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|222838651|gb|EEE77016.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 33/73 (45%), Positives = 41/73 (56%)
 Frame = +1

Query: 148 MEKRQLFLRSYHFSRKQSLSERIKKSFFGXXXXXXXXXXXXXXXXXXXWFRLKHGFFFYS 327
           MEKRQLFLRSY F RK++L+ERIK S                      W RL++   FY 
Sbjct: 1   MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKKVMWLRLRSARKIRRLVWSRLRYA--FYC 58

Query: 328 TRKRKFLRLQNNN 366
            R+R+FLRL N+N
Sbjct: 59  RRRRRFLRLINHN 71


>ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago truncatula]
           gi|355480329|gb|AES61532.1| hypothetical protein
           MTR_1g085240 [Medicago truncatula]
          Length = 114

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
 Frame = +1

Query: 127 PEMGYTDMEKRQLFLRSYHFSRKQSLSERIKKSFFGXXXXXXXXXXXXXXXXXXXWF--R 300
           P+  YT +EKRQLFLRSY F RK+SL+ERIK S                       F  R
Sbjct: 21  PDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRYARGLRRKLVFFPR 80

Query: 301 LKHGFFFYSTRKRKFLRLQNNNCCRSNGLSWPSSCFW 411
            K GF++   R+R+F +L NN+    +     SSC W
Sbjct: 81  FKCGFYY---RRRRFSQLLNNSGSSHHRKVDSSSCLW 114


Top