BLASTX nr result

ID: Panax21_contig00022238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022238
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   132   2e-29
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   128   5e-28
dbj|BAC42444.1| putative replication protein A1 [Arabidopsis tha...   124   8e-27
ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   2e-26
ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago tr...   119   3e-25

>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
           sativus]
          Length = 449

 Score =  132 bits (333), Expect = 2e-29
 Identities = 84/193 (43%), Positives = 94/193 (48%), Gaps = 49/193 (25%)
 Frame = +1

Query: 28  IEAASKYSTVDTLKQQYCFVPAKYK----------------------------------- 102
           IEAA+KYSTVDTLKQQYCF+PAKYK                                   
Sbjct: 211 IEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRN 270

Query: 103 --------------AKGLESLNKFKVGECSILVCTDLASRGLDIPXXXXXXXXXXXXXXX 240
                         AK L +LNKFK GEC+IL+CTD+ASRGLDIP               
Sbjct: 271 LGLRAIPISGQMTQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI--------- 321

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXNYNIPRNLKDYIHGVGRTARAG*SGVAISLVSQ 420
                                      NY+IP N KDYIH VGRTARAG SGVAISLV+Q
Sbjct: 322 ---------------------------NYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQ 354

Query: 421 YDLEWYLHIEKLI 459
           Y+LEWY+ IEKLI
Sbjct: 355 YELEWYIQIEKLI 367


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
           vinifera]
          Length = 470

 Score =  128 bits (321), Expect = 5e-28
 Identities = 84/193 (43%), Positives = 92/193 (47%), Gaps = 49/193 (25%)
 Frame = +1

Query: 28  IEAASKYSTVDTLKQQYCFVPAKYK----------------------------------- 102
           IE ASKYSTVDTLKQQY FVPAKYK                                   
Sbjct: 245 IEVASKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRN 304

Query: 103 --------------AKGLESLNKFKVGECSILVCTDLASRGLDIPXXXXXXXXXXXXXXX 240
                         AK L +LNKFK GEC+IL+CTD+ASRGLDIP               
Sbjct: 305 LGLRAIPISGHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVI--------- 355

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXNYNIPRNLKDYIHGVGRTARAG*SGVAISLVSQ 420
                                      NY+IP N KDYIH VGRTARAG SGVAISLV+Q
Sbjct: 356 ---------------------------NYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQ 388

Query: 421 YDLEWYLHIEKLI 459
           Y+LEWY+ IEKLI
Sbjct: 389 YELEWYIQIEKLI 401


>dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
           gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis
           thaliana]
          Length = 456

 Score =  124 bits (311), Expect = 8e-27
 Identities = 83/193 (43%), Positives = 91/193 (47%), Gaps = 49/193 (25%)
 Frame = +1

Query: 28  IEAASKYSTVDTLKQQYCFVPAKYK----------------------------------- 102
           IEAASKYSTVDTLKQQY FV AKYK                                   
Sbjct: 223 IEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRS 282

Query: 103 --------------AKGLESLNKFKVGECSILVCTDLASRGLDIPXXXXXXXXXXXXXXX 240
                         +K L +LNKFK GEC+ILVCTD+ASRGLDIP               
Sbjct: 283 LGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVI--------- 333

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXNYNIPRNLKDYIHGVGRTARAG*SGVAISLVSQ 420
                                      NY+IP N KDYIH VGRTARAG SGV ISLV+Q
Sbjct: 334 ---------------------------NYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366

Query: 421 YDLEWYLHIEKLI 459
           Y+LEWY+ IEKLI
Sbjct: 367 YELEWYIQIEKLI 379


>ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
           max]
          Length = 439

 Score =  122 bits (307), Expect = 2e-26
 Identities = 81/193 (41%), Positives = 93/193 (48%), Gaps = 49/193 (25%)
 Frame = +1

Query: 28  IEAASKYSTVDTLKQQYCFVPAKYK----------------------------------- 102
           IEA+SKYSTVDTLKQQY F+PAK+K                                   
Sbjct: 213 IEASSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDATRLLALILRN 272

Query: 103 --------------AKGLESLNKFKVGECSILVCTDLASRGLDIPXXXXXXXXXXXXXXX 240
                         +K L +LNKFK GEC+IL+CTD+ASRGLDIP               
Sbjct: 273 LGLKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVI--------- 323

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXNYNIPRNLKDYIHGVGRTARAG*SGVAISLVSQ 420
                                      NY+IP N KDYIH VGRTARAG SGVAISLV+Q
Sbjct: 324 ---------------------------NYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQ 356

Query: 421 YDLEWYLHIEKLI 459
           Y+LEWY+ IEKLI
Sbjct: 357 YELEWYIQIEKLI 369


>ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
            gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase
            dbp9 [Medicago truncatula]
          Length = 1155

 Score =  119 bits (297), Expect = 3e-25
 Identities = 79/193 (40%), Positives = 91/193 (47%), Gaps = 49/193 (25%)
 Frame = +1

Query: 28   IEAASKYSTVDTLKQQYCFVPAKYK----------------------------------- 102
            IE +SKYSTVDTLKQQY F+PAK+K                                   
Sbjct: 930  IETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEMAGSTSMVFTRTCDSTRLLALILRN 989

Query: 103  --------------AKGLESLNKFKVGECSILVCTDLASRGLDIPXXXXXXXXXXXXXXX 240
                           K L +LNKFK G+C+IL+CTD+ASRGLDIP               
Sbjct: 990  LGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVI--------- 1040

Query: 241  XXXXXXXXXXXXXXXXXXXXXXXXXXXNYNIPRNLKDYIHGVGRTARAG*SGVAISLVSQ 420
                                       NY+IP N KDYIH VGRTARAG SGVAISLV+Q
Sbjct: 1041 ---------------------------NYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQ 1073

Query: 421  YDLEWYLHIEKLI 459
            Y+LEWY+ IEKLI
Sbjct: 1074 YELEWYVQIEKLI 1086


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