BLASTX nr result

ID: Panax21_contig00022234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022234
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516943.1| conserved hypothetical protein [Ricinus comm...    78   7e-13
ref|XP_003550539.1| PREDICTED: uncharacterized protein LOC100798...    70   2e-10
ref|XP_002270026.1| PREDICTED: uncharacterized protein LOC100244...    69   3e-10
ref|XP_003528634.1| PREDICTED: uncharacterized protein LOC100802...    69   5e-10
ref|XP_002865709.1| hypothetical protein ARALYDRAFT_917876 [Arab...    67   2e-09

>ref|XP_002516943.1| conserved hypothetical protein [Ricinus communis]
           gi|223544031|gb|EEF45557.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/111 (45%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
 Frame = +1

Query: 7   IKERVKCAGLFSGFMITXXXXXXXXXXX--TAEDNNNHDTXXXXXXXXXXXXXXXXXXXX 180
           +KERVKC G+F GFMIT             ++    +H                      
Sbjct: 339 MKERVKCGGIFGGFMITSSSSSSSSSSYWVSSSAEEHHMNGKSTHGVAAAAGAGGPLAHG 398

Query: 181 RNKSWGWALASPIRAF-KPSS--GKRD-GAAAANKNSAPNLAAIPSLLAVR 321
           R++SWGWA ASP+RAF KPSS  GKRD    A+NKN+ PNL+AIPSLLAVR
Sbjct: 399 RSRSWGWAFASPMRAFSKPSSKDGKRDIIREASNKNTTPNLSAIPSLLAVR 449


>ref|XP_003550539.1| PREDICTED: uncharacterized protein LOC100798085 [Glycine max]
          Length = 444

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/111 (43%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = +1

Query: 7   IKERVKCAGLFSGFMITXXXXXXXXXXXTAEDNNNHDTXXXXXXXXXXXXXXXXXXXXRN 186
           IKERV+C GLFSGFM+T               + +                       R 
Sbjct: 339 IKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAVNGKSATVALSHN------RG 392

Query: 187 KSWGWALASPIRAF--KPS---SGKRDGAAAAN-KNSAPNLAAIPSLLAVR 321
           +SWGWA ASP+RAF  KPS   S +RD    AN KN+ PNL+AIPSLLAVR
Sbjct: 393 RSWGWAFASPMRAFSGKPSSKESNRRDIIRDANDKNATPNLSAIPSLLAVR 443


>ref|XP_002270026.1| PREDICTED: uncharacterized protein LOC100244834 [Vitis vinifera]
          Length = 420

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/113 (42%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
 Frame = +1

Query: 7   IKERVKCAGLFSGFMITXXXXXXXXXXX----TAEDNNNHDTXXXXXXXXXXXXXXXXXX 174
           IKERVKC G+F GF++T               T EDN N  +                  
Sbjct: 315 IKERVKCGGIFGGFIMTSSSSSSSSSSYWMSSTVEDNVNGKSTAAAAPGPLSHG------ 368

Query: 175 XXRNKSWGWALASPIRAF-KPSSGKRDGAAAANKN---SAPNLAAIPSLLAVR 321
             R+KSWGWA ASP+RA  KPSS K +   A  ++   + PNLAAIPSLLAVR
Sbjct: 369 --RSKSWGWAFASPMRALSKPSSSKVEYKDAGKRDITPNKPNLAAIPSLLAVR 419


>ref|XP_003528634.1| PREDICTED: uncharacterized protein LOC100802982 [Glycine max]
          Length = 420

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/111 (41%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
 Frame = +1

Query: 7   IKERVKCAGLFSGFMITXXXXXXXXXXXTAEDNNNHDTXXXXXXXXXXXXXXXXXXXXRN 186
           +KERV+C GLFSGFM+T               + +                       R 
Sbjct: 312 MKERVRCGGLFSGFMMTSSSSSSSSSSYWVSSSADDAAAAAAVNGKSATVALSHN---RG 368

Query: 187 KSWGWALASPIRAF--KPS---SGKRD-GAAAANKNSAPNLAAIPSLLAVR 321
           +SWGWA ASP+RAF  KPS   S +RD    A++KN+ PNL+AIPSLLAVR
Sbjct: 369 RSWGWAFASPMRAFSGKPSSKESNRRDIIRGASDKNATPNLSAIPSLLAVR 419


>ref|XP_002865709.1| hypothetical protein ARALYDRAFT_917876 [Arabidopsis lyrata subsp.
           lyrata] gi|297311544|gb|EFH41968.1| hypothetical protein
           ARALYDRAFT_917876 [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1   DSIKERVKCAGLFSGFMITXXXXXXXXXXXTAEDNNNHDTXXXXXXXXXXXXXXXXXXXX 180
           + ++E V+C G+F GFMI            ++  +++                       
Sbjct: 282 NGVREMVRCGGIFGGFMIMTS---------SSSSSSSSSWVSSSSAEHHHHNHNMGHGGG 332

Query: 181 RNKSWGWALASPIRAFKPSS--GKRDG--AAAANKNSAPNLAAIPSLLAVRN 324
           RN+SWGWA ASP+RAF  SS  GKR    + + +KN+ PNL AIPSLL+VR+
Sbjct: 333 RNRSWGWAFASPMRAFSSSSSFGKRGRTISDSTSKNTTPNLGAIPSLLSVRS 384


Top