BLASTX nr result

ID: Panax21_contig00022229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022229
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   119   3e-25
ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   119   3e-25
ref|XP_002285291.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   118   6e-25
gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvu...   118   8e-25

>ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|222864872|gb|EEF02003.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/74 (78%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   DQCAHLLIPLNKCRQSELYLPWKCDNERHSYEKCEYELVMERMLQMQKIRQKQESHAKSK 182
           DQCAHLLIPLNKCRQSE +LPWKC+NERH YEKCEYELVMERMLQMQKIR+ +    +S 
Sbjct: 28  DQCAHLLIPLNKCRQSEFFLPWKCENERHVYEKCEYELVMERMLQMQKIREAEAKLKQSH 87

Query: 183 QQG-IPLIPNTANA 221
           +QG IPLIP TANA
Sbjct: 88  KQGTIPLIPKTANA 101


>ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 2 [Cucumis sativus]
           gi|449445266|ref|XP_004140394.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 3 [Cucumis sativus]
           gi|449445268|ref|XP_004140395.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 4 [Cucumis sativus]
           gi|449528433|ref|XP_004171209.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like [Cucumis sativus]
          Length = 96

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/72 (81%), Positives = 64/72 (88%)
 Frame = +3

Query: 3   DQCAHLLIPLNKCRQSELYLPWKCDNERHSYEKCEYELVMERMLQMQKIRQKQESHAKSK 182
           DQCAHLLIPLNKCRQSE YLPWKC++ERHSYEKCEYELVMERMLQMQKIR++Q   AK K
Sbjct: 28  DQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEQ---AKLK 84

Query: 183 QQGIPLIPNTAN 218
            +GI LIP TAN
Sbjct: 85  -KGIHLIPKTAN 95


>ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 1 [Cucumis sativus]
          Length = 100

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/72 (81%), Positives = 64/72 (88%)
 Frame = +3

Query: 3   DQCAHLLIPLNKCRQSELYLPWKCDNERHSYEKCEYELVMERMLQMQKIRQKQESHAKSK 182
           DQCAHLLIPLNKCRQSE YLPWKC++ERHSYEKCEYELVMERMLQMQKIR++Q   AK K
Sbjct: 28  DQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEQ---AKLK 84

Query: 183 QQGIPLIPNTAN 218
            +GI LIP TAN
Sbjct: 85  -KGIHLIPKTAN 95


>ref|XP_002285291.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7 [Vitis vinifera] gi|147777223|emb|CAN63291.1|
           hypothetical protein VITISV_025199 [Vitis vinifera]
          Length = 100

 Score =  118 bits (296), Expect = 6e-25
 Identities = 53/73 (72%), Positives = 63/73 (86%)
 Frame = +3

Query: 3   DQCAHLLIPLNKCRQSELYLPWKCDNERHSYEKCEYELVMERMLQMQKIRQKQESHAKSK 182
           DQCAHLLIPLNKCR +E YLPWKC+ ERH YEKCEYELVMERML+MQKI++++    +S+
Sbjct: 28  DQCAHLLIPLNKCRHAEFYLPWKCEAERHVYEKCEYELVMERMLKMQKIQEEEAKLKQSQ 87

Query: 183 QQGIPLIPNTANA 221
           +Q IPLIP TANA
Sbjct: 88  KQPIPLIPKTANA 100


>gb|ADQ43191.1| NADH-ubiquinone oxidoreductase B18 [Eutrema parvulum]
          Length = 102

 Score =  118 bits (295), Expect = 8e-25
 Identities = 54/75 (72%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   DQCAHLLIPLNKCRQSELYLPWKCDNERHSYEKCEYELVMERMLQMQKIRQKQESHAKSK 182
           DQCAHLLIPLNKCRQ+E +LPWKC++ERH YEKCEYELVMERML MQKIR+++    ++K
Sbjct: 28  DQCAHLLIPLNKCRQAEFFLPWKCEDERHVYEKCEYELVMERMLAMQKIREEEAKAKQNK 87

Query: 183 QQ--GIPLIPNTANA 221
            Q  G+PLIP TANA
Sbjct: 88  LQGNGVPLIPKTANA 102


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