BLASTX nr result

ID: Panax21_contig00022223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022223
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]   134   2e-29
ref|XP_002517598.1| racemase and epimerase, acting on amino acid...   126   6e-27
ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|2...   116   6e-24
ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249...   111   3e-22
ref|XP_004152211.1| PREDICTED: uncharacterized protein LOC101217...    93   7e-17

>emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
          Length = 330

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 3/126 (2%)
 Frame = +3

Query: 519 MSFHTLNYSSHVLGNLKTYRTLYGTRPIPVRAISPSSIIFESD---NLPDSKKSSGLDTP 689
           MSFH+L Y SH++GN+  +  L  T   P+ A+ PSS + ++D   NLP+SK SSG D  
Sbjct: 3   MSFHSLKYPSHMMGNVHKHXILXRTMKNPILAVPPSSTLLQTDESGNLPESKNSSGSDAA 62

Query: 690 SIISASGGFLLNQQNAVGIIGGVSVDSALNFVRKLVKWSSNDEEAGLSFVLCSDPLLNKD 869
           S  S S    +NQ   VGIIGGVSVDS LNF++KLV+WSS D    L FVLCSDP+LNK 
Sbjct: 63  STNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQ 122

Query: 870 LLQHER 887
           LL HER
Sbjct: 123 LLSHER 128


>ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
           putative [Ricinus communis] gi|223543230|gb|EEF44762.1|
           racemase and epimerase, acting on amino acids and
           derivatives, putative [Ricinus communis]
          Length = 330

 Score =  126 bits (317), Expect = 6e-27
 Identities = 70/126 (55%), Positives = 84/126 (66%), Gaps = 3/126 (2%)
 Frame = +3

Query: 519 MSFHTLNYSSHVLGNLKTYRTLYGTRPIPVRAISPSSIIF---ESDNLPDSKKSSGLDTP 689
           MSFH+LNY SH   N+ T++T Y  R   V+A+ PSS+I    ES     SKKSSG    
Sbjct: 8   MSFHSLNYPSHRFNNVNTHKTSYKARSNLVQAVPPSSVILHTDESGRFRGSKKSSGST-- 65

Query: 690 SIISASGGFLLNQQNAVGIIGGVSVDSALNFVRKLVKWSSNDEEAGLSFVLCSDPLLNKD 869
              S S   LLNQ N VGIIGG SV+ ALNF++KLV+WSS D +  L FVLCSDP+LNK+
Sbjct: 66  ---SDSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCSDPVLNKE 122

Query: 870 LLQHER 887
           LL HER
Sbjct: 123 LLSHER 128


>ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  116 bits (291), Expect = 6e-24
 Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 3/126 (2%)
 Frame = +3

Query: 519 MSFHTLNYSSHVLGNLKTYRTLYGTRPIPVRAISPSSIIF---ESDNLPDSKKSSGLDTP 689
           M FHTL +  H+LG++ T+R L+ +R  PV AI PSSI+    ES   PDSKK SGL   
Sbjct: 8   MPFHTL-HPCHLLGHVNTHRALHKSRLQPVLAIPPSSILLHTDESGKFPDSKKGSGLRGR 66

Query: 690 SIISASGGFLLNQQNAVGIIGGVSVDSALNFVRKLVKWSSNDEEAGLSFVLCSDPLLNKD 869
                S   LL+Q N VGIIGG+SV+SALNF++KLV+ SS + +    FVLCSDP+LNK+
Sbjct: 67  D----SSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLCSDPVLNKE 122

Query: 870 LLQHER 887
           LL HER
Sbjct: 123 LLSHER 128


>ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
          Length = 305

 Score =  111 bits (277), Expect = 3e-22
 Identities = 57/98 (58%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
 Frame = +3

Query: 603 PVRAISPSSIIFESD---NLPDSKKSSGLDTPSIISASGGFLLNQQNAVGIIGGVSVDSA 773
           P+ A+ PSS + ++D   NLP+SK SSG D  S  S S    +NQ   VGIIGGVSVDS 
Sbjct: 4   PILAVPPSSTLLQTDESGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDST 63

Query: 774 LNFVRKLVKWSSNDEEAGLSFVLCSDPLLNKDLLQHER 887
           LNF++KLV+WSS D    L FVLCSDP+LNK LL HER
Sbjct: 64  LNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHER 101


>ref|XP_004152211.1| PREDICTED: uncharacterized protein LOC101217164 [Cucumis sativus]
           gi|449532820|ref|XP_004173376.1| PREDICTED:
           uncharacterized protein LOC101225587 [Cucumis sativus]
          Length = 327

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 56/125 (44%), Positives = 80/125 (64%), Gaps = 7/125 (5%)
 Frame = +3

Query: 519 MSFHTLNYSSHVLGNLKTYRTLYGTRPIPVRAISPSSIIF--ESDNLPDSKKSSGLDTPS 692
           M+F  L+  S +   + T R     R  PV+A+ PS+++   ES++ P+SKK+SG    S
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFS--S 58

Query: 693 IISA---SGGFLLNQQNAVGIIGGVSVDSALNFVRKLVKWSSNDEE--AGLSFVLCSDPL 857
           ++     S G LL+Q N VGI+GG SV+S +NF+ KLVKWS+ D E  +GL FVLCSDP 
Sbjct: 59  VLKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPT 118

Query: 858 LNKDL 872
           L+ +L
Sbjct: 119 LSNEL 123


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