BLASTX nr result

ID: Panax21_contig00022216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022216
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...    89   1e-15
ref|XP_004146205.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...    86   6e-15
gb|AFK48908.1| unknown [Lotus japonicus]                               76   5e-12
ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...    74   3e-11
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...    72   1e-10

>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 40/71 (56%), Positives = 45/71 (63%)
 Frame = +1

Query: 415 SRLNEGEGTRVLPCMHEFHKACIGRWLDMCRKTCPVCRFSMADXXXXXXXXXXXXXXXMM 594
           SRL  GE  RVLPCMH FH+ CI RW ++CRKTCPVCRF+M                 M+
Sbjct: 68  SRLKGGENMRVLPCMHRFHRVCIDRWFNVCRKTCPVCRFAMGQ-EERTYKREEQLTEEMV 126

Query: 595 IWFSSFHAAGF 627
           IWFSSFH AGF
Sbjct: 127 IWFSSFHVAGF 137


>ref|XP_004146205.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis
           sativus]
          Length = 144

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = +1

Query: 424 NEGEGTRVLPCMHEFHKACIGRWLDMCRKTCPVCRFSMADXXXXXXXXXXXXXXXMMIWF 603
           ++G GT VLPC+HEFHK C+ RW + CR+TCP+CR+SM                 M+IWF
Sbjct: 77  DKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWF 136

Query: 604 SSFHAAGF 627
           SSFH +GF
Sbjct: 137 SSFHTSGF 144


>gb|AFK48908.1| unknown [Lotus japonicus]
          Length = 113

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 36/70 (51%), Positives = 42/70 (60%)
 Frame = +1

Query: 415 SRLNEGEGTRVLPCMHEFHKACIGRWLDMCRKTCPVCRFSMADXXXXXXXXXXXXXXXMM 594
           SRL + +  RVLPC+HEFHK C+ RWL    KTCP+CRFSM                 M+
Sbjct: 44  SRLKDRDEIRVLPCLHEFHKICVNRWLKGHHKTCPLCRFSMG-AAEEKSHRAEMFTDEMV 102

Query: 595 IWFSSFHAAG 624
           IWFSSFH AG
Sbjct: 103 IWFSSFHIAG 112


>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 35/70 (50%), Positives = 41/70 (58%)
 Frame = +1

Query: 415 SRLNEGEGTRVLPCMHEFHKACIGRWLDMCRKTCPVCRFSMADXXXXXXXXXXXXXXXMM 594
           SRL   +  RVLPC H+FHK+C+ RWL    KTCP+CRFSM                 M+
Sbjct: 65  SRLKAKDEIRVLPCSHKFHKSCVNRWLKGRHKTCPLCRFSMG--AEEKSHRAEMFTEEML 122

Query: 595 IWFSSFHAAG 624
           IWFSSFH AG
Sbjct: 123 IWFSSFHVAG 132


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 34/70 (48%), Positives = 40/70 (57%)
 Frame = +1

Query: 415 SRLNEGEGTRVLPCMHEFHKACIGRWLDMCRKTCPVCRFSMADXXXXXXXXXXXXXXXMM 594
           SRL   +  RVLPC H+FHK C+ +WL    KTCP+CRFSM                 M+
Sbjct: 33  SRLKAKDEIRVLPCSHKFHKICVNKWLKGRHKTCPLCRFSMG--AEEKSHRAEMFTEEML 90

Query: 595 IWFSSFHAAG 624
           IWFSSFH AG
Sbjct: 91  IWFSSFHVAG 100


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