BLASTX nr result

ID: Panax21_contig00022215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022215
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23113.3| unnamed protein product [Vitis vinifera]              613   e-173
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    570   e-160
ref|XP_002519605.1| DNA mismatch repair protein muts2, putative ...   535   e-149
ref|XP_004137269.1| PREDICTED: mutS2 protein-like [Cucumis sativus]   509   e-142
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       505   e-140

>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  613 bits (1580), Expect = e-173
 Identities = 308/431 (71%), Positives = 368/431 (85%), Gaps = 4/431 (0%)
 Frame = +3

Query: 3    VDLDDIENLFKDMIRLDAINARATYSLSFGGTCPDLFFPADK----TMEGLSGDEATMAS 170
            +DL+DIE L   +I+LD INARATY LSFGGTCPDLF   +K    T   LSG   + AS
Sbjct: 291  MDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEAS 350

Query: 171  HPTQMKWKLYLPKAFHPLLLQQHRENLQKAMKDVSNAKSEIRRRKQKMGNMTRKEEADIS 350
            +P + +W L+LPKA+HPLL+QQHRENLQKA KDVS A SE RR+K +      KEE DI+
Sbjct: 351  YPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGEKFNVKEETDIN 410

Query: 351  LSSLELQVTNVEQAIPVPVDIFITKKTSVVIITGPNTGGKTICLKTVGLAAMMAKSGLYV 530
            LSSLE+QVT +EQ+ PVPVD FI ++T V++ITGPNTGGKTICLKTVGLAAMMA+SGL+V
Sbjct: 411  LSSLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHV 470

Query: 531  LSSEPVKIPWFDSVFADIGDEQSLSQSLSTFSGHLKQTSEIRSHSTNRSLVLLDEVGAGT 710
            L++EPV+IPWFD VFADIGDEQSLSQSLSTFSGHLKQ S+I++ STN+SLVLLDEVGAGT
Sbjct: 471  LAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGT 530

Query: 711  NPLEGAALGMSLLESFAESGALLTIATTHHGELKTLKYSNEAFENACMEFDDVNLKPTYR 890
            NPLEGAALGMSLLESFAE+GALLTIATTHH ELKTLKYSN+AFENACMEFD+VNLKPTY+
Sbjct: 531  NPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYK 590

Query: 891  ILWGVPGRSNAINIAERLGLPKIVLEDARGRYGPASAEINEAIVDMERFKQNFHEHIHEA 1070
            ILWG+PGRSNAINIAERLG+PK VL+ AR +YG ASAEINE I+DMERFKQ F E +++A
Sbjct: 591  ILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDA 650

Query: 1071 QHYLMLSRDLHEKLLVTRRKVIEHGIHERYRKRQEISQAAAIARSTLHKKLRQFRATAAQ 1250
            ++YLMLSRDL+E LLVT+RK++EHG ++RY K +E+S+AAA+ARS LHKK+RQ R++A +
Sbjct: 651  RYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATR 710

Query: 1251 PSKLTTTDISQ 1283
            PS+ T  D SQ
Sbjct: 711  PSQPTAADKSQ 721


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  570 bits (1469), Expect = e-160
 Identities = 293/431 (67%), Positives = 351/431 (81%), Gaps = 4/431 (0%)
 Frame = +3

Query: 3    VDLDDIENLFKDMIRLDAINARATYSLSFGGTCPDLFFPADK----TMEGLSGDEATMAS 170
            +DL+DIE L   +I+LD INARATY LSFGGTCPDLF   +K    T   LSG   + AS
Sbjct: 302  MDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEAS 361

Query: 171  HPTQMKWKLYLPKAFHPLLLQQHRENLQKAMKDVSNAKSEIRRRKQKMGNMTRKEEADIS 350
            +P + +W L+LPKA+HPLL+QQHRENLQKA KDVS A                     IS
Sbjct: 362  YPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLA---------------------IS 400

Query: 351  LSSLELQVTNVEQAIPVPVDIFITKKTSVVIITGPNTGGKTICLKTVGLAAMMAKSGLYV 530
            +S +      +EQ+ PVPVD FI ++T V++ITGPNTGGKTICLKTVGLAAMMA+SGL+V
Sbjct: 401  VSYV------LEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHV 454

Query: 531  LSSEPVKIPWFDSVFADIGDEQSLSQSLSTFSGHLKQTSEIRSHSTNRSLVLLDEVGAGT 710
            L++EPV+IPWFD VFADIGDEQSLSQSLSTFSGHLKQ S+I++ STN+SLVLLDEVGAGT
Sbjct: 455  LAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGT 514

Query: 711  NPLEGAALGMSLLESFAESGALLTIATTHHGELKTLKYSNEAFENACMEFDDVNLKPTYR 890
            NPLEGAALGMSLLESFAE+GALLTIATTHH ELKTLKYSN+AFENACMEFD+VNLKPTY+
Sbjct: 515  NPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYK 574

Query: 891  ILWGVPGRSNAINIAERLGLPKIVLEDARGRYGPASAEINEAIVDMERFKQNFHEHIHEA 1070
            ILWG+PGRSNAINIAERLG+PK VL+ AR +YG ASAEINE I+DMERFKQ F E +++A
Sbjct: 575  ILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDA 634

Query: 1071 QHYLMLSRDLHEKLLVTRRKVIEHGIHERYRKRQEISQAAAIARSTLHKKLRQFRATAAQ 1250
            ++YLMLSRDL+E LLVT+RK++EHG ++RY K +E+S+AAA+ARS LHKK+RQ R++A +
Sbjct: 635  RYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATR 694

Query: 1251 PSKLTTTDISQ 1283
            PS+ T  D SQ
Sbjct: 695  PSQPTAADKSQ 705


>ref|XP_002519605.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
            gi|223541195|gb|EEF42750.1| DNA mismatch repair protein
            muts2, putative [Ricinus communis]
          Length = 491

 Score =  535 bits (1377), Expect = e-149
 Identities = 276/401 (68%), Positives = 321/401 (80%), Gaps = 5/401 (1%)
 Frame = +3

Query: 51   DAINARATYSLSFGGTCPDLFFPADKTMEGLSGDEAT-----MASHPTQMKWKLYLPKAF 215
            + INARATYSLSFGG CPDL+ P D  M+GL   EA+       S+P + KW LY+ KA+
Sbjct: 48   EKINARATYSLSFGGACPDLYLPED--MDGLFTAEASEMRALKGSNPLERKWILYMRKAY 105

Query: 216  HPLLLQQHRENLQKAMKDVSNAKSEIRRRKQKMGNMTRKEEADISLSSLELQVTNVEQAI 395
            HPLLLQQHR+NLQKA KD   A S+    K +  N   + E D+  SS E++V+ +EQA 
Sbjct: 106  HPLLLQQHRQNLQKAQKDAKKATSQ----KLQGDNGMSRGETDLDSSSSEIKVSALEQAH 161

Query: 396  PVPVDIFITKKTSVVIITGPNTGGKTICLKTVGLAAMMAKSGLYVLSSEPVKIPWFDSVF 575
            PVPVD  I + + V++ITGPNTGGKTICLKTVGLAAMMAKSGLYVL SE V++PWFD + 
Sbjct: 162  PVPVDFLIAQNSRVLVITGPNTGGKTICLKTVGLAAMMAKSGLYVLCSESVQLPWFDYIL 221

Query: 576  ADIGDEQSLSQSLSTFSGHLKQTSEIRSHSTNRSLVLLDEVGAGTNPLEGAALGMSLLES 755
            ADIGDEQSLSQSLSTFSGHLKQ S+IRS STNRSLVLLDEVGAGTNPLEGAALGMSLLES
Sbjct: 222  ADIGDEQSLSQSLSTFSGHLKQISDIRSQSTNRSLVLLDEVGAGTNPLEGAALGMSLLES 281

Query: 756  FAESGALLTIATTHHGELKTLKYSNEAFENACMEFDDVNLKPTYRILWGVPGRSNAINIA 935
            FAE GALLTIATTHH ELK+LKYSN AFENACMEFD+VNLKPTY+I+WGVPGRSNAINI+
Sbjct: 282  FAEDGALLTIATTHHSELKSLKYSNSAFENACMEFDEVNLKPTYKIIWGVPGRSNAINIS 341

Query: 936  ERLGLPKIVLEDARGRYGPASAEINEAIVDMERFKQNFHEHIHEAQHYLMLSRDLHEKLL 1115
            E+LGLP  V+  AR  YG ASAEINE I+DMERFKQ   E ++EAQH + LS+DLHE LL
Sbjct: 342  EKLGLPDRVINIARELYGAASAEINEVIIDMERFKQEVQELLYEAQHQIRLSKDLHEALL 401

Query: 1116 VTRRKVIEHGIHERYRKRQEISQAAAIARSTLHKKLRQFRA 1238
            + RRK++EHG  +RY+  QEI + AA+ARS LHKK+RQ RA
Sbjct: 402  LARRKIMEHGSSQRYKMMQEIYEIAAMARSLLHKKVRQHRA 442


>ref|XP_004137269.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
          Length = 837

 Score =  509 bits (1310), Expect = e-142
 Identities = 267/436 (61%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
 Frame = +3

Query: 3    VDLDDIENLFKDMIRLDAINARATYSLSFGGTCPDLFFPADKTMEG---------LSGDE 155
            +D +DI  L   +I LD +NARA+Y LSFGGTCP+L       +EG         LSGD+
Sbjct: 323  MDFEDISKLIGCIIELDVVNARASYGLSFGGTCPNLVL-----LEGCNSSIANVCLSGDQ 377

Query: 156  ATMASHPTQMKWKLYLPKAFHPLLLQQHRENLQKAMKDVSNAKSEIRRRKQKMGNMTRKE 335
            +  ASH  + +W LYL    HPLLLQQ+RENL+ A +DV NA +E+ R K   GNM+ KE
Sbjct: 378  SE-ASHLKKNEWVLYLQNTHHPLLLQQYRENLKNAKRDVKNAFNEMGR-KPPGGNMSWKE 435

Query: 336  EADISLSSLELQVTNVEQAIPVPVDIFITKKTSVVIITGPNTGGKTICLKTVGLAAMMAK 515
            +  I +S  +++V  +EQA PV VD  I+++  V++ITGPNTGGKT+CLKT+GLAAMMAK
Sbjct: 436  KEVIDISLFKMKVDQLEQARPVSVDFSISRRIKVLVITGPNTGGKTVCLKTIGLAAMMAK 495

Query: 516  SGLYVLSSEPVKIPWFDSVFADIGDEQSLSQSLSTFSGHLKQTSEIRSHSTNRSLVLLDE 695
            SGL+VL+SE V+IPWFDS+FADIGDEQSL+QSLSTFSGHL++ S+I+S ST++SLVLLDE
Sbjct: 496  SGLHVLASESVQIPWFDSIFADIGDEQSLTQSLSTFSGHLRKISDIQSVSTSQSLVLLDE 555

Query: 696  VGAGTNPLEGAALGMSLLESFAESGALLTIATTHHGELKTLKYSNEAFENACMEFDDVNL 875
            VGAGTNPLEGAALGMSLLESFA+SGA LTIATTHHGELKTLKYSNE FENACMEFD+VNL
Sbjct: 556  VGAGTNPLEGAALGMSLLESFAKSGAALTIATTHHGELKTLKYSNEVFENACMEFDEVNL 615

Query: 876  KPTYRILWGVPGRSNAINIAERLGLPKIVLEDARGRYGPASAEINEAIVDMERFKQNFHE 1055
            KPTY+ILWG+PGRSNAINIAERLGLP  V++DAR  YG  SA+I+E I DME  K+ + +
Sbjct: 616  KPTYKILWGIPGRSNAINIAERLGLPSSVVDDARELYGAGSAQIDEVITDMECIKKKYGD 675

Query: 1056 HIHEAQHYLMLSRDLHEKLLVTRRKVIEHGIHERYRKRQEISQAAAIARSTLHKKLRQFR 1235
             + EAQ+ L  S++L+EKLL+ RR +IEHG  +R RK QE++ AA  ARS LH+K R+ R
Sbjct: 676  LLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVANAATTARSNLHQKGRELR 735

Query: 1236 ATAAQPSKLTTTDISQ 1283
            A+  + +  +  D  Q
Sbjct: 736  ASTIEYTSPSAIDRMQ 751


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  505 bits (1300), Expect = e-140
 Identities = 263/427 (61%), Positives = 320/427 (74%), Gaps = 4/427 (0%)
 Frame = +3

Query: 3    VDLDDIENLFKDMIRLDAINARATYSLSFGGTCPDLFFP---ADKTMEG-LSGDEATMAS 170
            +DLDDIE     ++ LD INARATY LSFGG+ P +F P   +  T E  L   E     
Sbjct: 303  LDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHIFLPDRSSSSTAEAFLPRSENLYGP 362

Query: 171  HPTQMKWKLYLPKAFHPLLLQQHRENLQKAMKDVSNAKSEIRRRKQKMGNMTRKEEADIS 350
             P++ +W LYL KA+HPLLLQ+H+E L+KA K+V+ A S+                    
Sbjct: 363  LPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAA------------------ 404

Query: 351  LSSLELQVTNVEQAIPVPVDIFITKKTSVVIITGPNTGGKTICLKTVGLAAMMAKSGLYV 530
                      ++ A PVPVD  +++KT V++ITGPNTGGKTICLKTVGLAAMMAKSGLYV
Sbjct: 405  ----------LDNAPPVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYV 454

Query: 531  LSSEPVKIPWFDSVFADIGDEQSLSQSLSTFSGHLKQTSEIRSHSTNRSLVLLDEVGAGT 710
            L+SE  +IPWFDSVFADIGDEQSLSQSLSTFSGHLKQ S I+S ST++SLVLLDEVGAGT
Sbjct: 455  LASESAQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGT 514

Query: 711  NPLEGAALGMSLLESFAESGALLTIATTHHGELKTLKYSNEAFENACMEFDDVNLKPTYR 890
            NPLEGAALGM+LLESFA+   LLT+ATTHHGELKTLKYS+EAFENACMEFD+VNLKPTY+
Sbjct: 515  NPLEGAALGMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYK 574

Query: 891  ILWGVPGRSNAINIAERLGLPKIVLEDARGRYGPASAEINEAIVDMERFKQNFHEHIHEA 1070
            +LWGVPGRSNAINIAERLGLP +V++ AR  YG ASAEI+E I DMER KQ + E + EA
Sbjct: 575  VLWGVPGRSNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEA 634

Query: 1071 QHYLMLSRDLHEKLLVTRRKVIEHGIHERYRKRQEISQAAAIARSTLHKKLRQFRATAAQ 1250
            +HYL  SR L+  LL TRRK+IE+  + R++K +++S+AAA+ARS LHKK+R+  A+A Q
Sbjct: 635  RHYLRHSRGLYNSLLNTRRKIIEYSTNLRFKKMRDVSEAAAMARSILHKKVRELDASAKQ 694

Query: 1251 PSKLTTT 1271
            PS+   T
Sbjct: 695  PSQNNKT 701


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