BLASTX nr result

ID: Panax21_contig00022213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022213
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-52
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      211   2e-52
emb|CBI22103.3| unnamed protein product [Vitis vinifera]              206   1e-50
ref|XP_002454862.1| hypothetical protein SORBIDRAFT_03g000260 [S...   134   5e-29
emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]   134   5e-29

>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  212 bits (539), Expect = 1e-52
 Identities = 127/262 (48%), Positives = 163/262 (62%), Gaps = 21/262 (8%)
 Frame = +2

Query: 71  KFFNIPLSDAADTLGVCNSTLKKICHDNGLVRWPYRKFLSGKSIEDIIKEASREKKMEPA 250
           K F++PLSDAA+ LGVC S LKKIC DNGL RWPYRK+L+GKSIEDI + A+REK    A
Sbjct: 22  KHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIEDIRRYAAREKIKAIA 81

Query: 251 ELLKASKDQNDDVTKINVPTVGSTLQNKNTIPVHDISKARSITHQQGNKNIQNATQAI-- 424
           +L KA+               G   QN      H +        QQG K++    Q I  
Sbjct: 82  DLAKAANKS------------GIQQQNNENSKPHKL-------QQQGTKDVLVGRQHITL 122

Query: 425 ----------VDEFKYGFPSDGLSRTSNKWWGSSTTDSKK--DAHG----KEDNQQSEKP 556
                     +DEFKYGFPSDGLS  +NKWWGSS +D+++  D  G    ++D +QSE+ 
Sbjct: 123 TPGLAKGLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEK 182

Query: 557 VNDSPS---KDKVDSQSGKDESNNIPELSGTGLLTTVRKRAVDEGREALKLGVHQFSGIN 727
           V+   S    D+   ++GK ESN I +  GTGLLT+VRKRA +EGREALKLGV++  G+N
Sbjct: 183 VDAGTSVVIVDEEKGENGKMESNEI-DPQGTGLLTSVRKRAAEEGREALKLGVYRTYGVN 241

Query: 728 KPGKREQRLLLGIFGSSLPKDW 793
           K G++++ LLL IFGSSLPK W
Sbjct: 242 KLGRKQRALLLRIFGSSLPKQW 263


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  211 bits (538), Expect = 2e-52
 Identities = 127/262 (48%), Positives = 163/262 (62%), Gaps = 21/262 (8%)
 Frame = +2

Query: 71  KFFNIPLSDAADTLGVCNSTLKKICHDNGLVRWPYRKFLSGKSIEDIIKEASREKKMEPA 250
           K F++PLSDAA+ LGVC S LKKIC +NGL RWPYRK+L+GKSIEDI + A+REK    A
Sbjct: 22  KHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIEDIRRYAAREKIKAIA 81

Query: 251 ELLKASKDQNDDVTKINVPTVGSTLQNKNTIPVHDISKARSITHQQGNKNIQNATQAI-- 424
           +L KA+               G   QN      H +        QQG K++    Q I  
Sbjct: 82  DLAKAANKS------------GIQQQNNENSKPHKL-------QQQGTKDVLVGRQHIML 122

Query: 425 ----------VDEFKYGFPSDGLSRTSNKWWGSSTTDSKK--DAHG----KEDNQQSEKP 556
                     +DEFKYGFPSDGLS  +NKWWGSS +D+++  D  G    ++D  QSE+ 
Sbjct: 123 TPGLAKGLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEK 182

Query: 557 VNDSPS---KDKVDSQSGKDESNNIPELSGTGLLTTVRKRAVDEGREALKLGVHQFSGIN 727
           V+   S    D+   ++GK ESN I +  GTGLLT+VRKRAV+EGREALKLGV++  G+N
Sbjct: 183 VDAGTSVVIVDEEKGENGKMESNEI-DPQGTGLLTSVRKRAVEEGREALKLGVYRTYGVN 241

Query: 728 KPGKREQRLLLGIFGSSLPKDW 793
           K G++++ LLL IFGSSLPK W
Sbjct: 242 KLGRKQRALLLRIFGSSLPKQW 263


>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  206 bits (523), Expect = 1e-50
 Identities = 122/272 (44%), Positives = 163/272 (59%), Gaps = 28/272 (10%)
 Frame = +2

Query: 77  FNIPLSDAADTLGVCNSTLKKICHDNGLVRWPYRKFLSGKSIEDIIKEASREKKMEPAEL 256
           F++P+S+AA+ LGVC S LKKIC +NGL RWPYRKF SG S+E+I K A+RE+  E A+L
Sbjct: 22  FSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKYAARERNKELAQL 81

Query: 257 LKASKDQNDDVTKINVPTV-GSTLQNKNTIPVHDISKARS-----ITHQQGNKNIQN--- 409
            K     ND +T   V    GS  QN     +  +SK        +  QQG++NIQN   
Sbjct: 82  SKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQQQGSRNIQNGRP 141

Query: 410 ----------ATQAIVDEFKYGFPSDGLSRTSNKWWGSSTTDSKKDAHG------KEDNQ 541
                        A +DEFKYGFP+ GL+  SNKWWGSS+ D  +   G      +ED +
Sbjct: 142 QNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTIGNGVEIDEEDKK 201

Query: 542 QSEKPVNDSPS---KDKVDSQSGKDESNNIPELSGTGLLTTVRKRAVDEGREALKLGVHQ 712
           QSE+  ++  +    D   +++ K+E    P+  GTGLLT VRK  V+EGR+ LK+GV +
Sbjct: 202 QSEQLADNGANLLVMDGEKAENEKEEGTIGPQ--GTGLLTAVRKTTVEEGRKILKIGVGR 259

Query: 713 FSGINKPGKREQRLLLGIFGSSLPKDWWDGSS 808
             G+ K GK+E+RLLL IFGSSLP  W +GSS
Sbjct: 260 DHGVLKAGKKERRLLLQIFGSSLPSQWINGSS 291


>ref|XP_002454862.1| hypothetical protein SORBIDRAFT_03g000260 [Sorghum bicolor]
           gi|241926837|gb|EER99981.1| hypothetical protein
           SORBIDRAFT_03g000260 [Sorghum bicolor]
          Length = 289

 Score =  134 bits (336), Expect = 5e-29
 Identities = 80/254 (31%), Positives = 134/254 (52%), Gaps = 16/254 (6%)
 Frame = +2

Query: 71  KFFNIPLSDAADTLGVCNSTLKKICHDNGLVRWPYRKFLSGKSIEDIIKEASREKKMEPA 250
           K F++P+++AA  LGVC S LK+IC  +G+VRWPYRK +SGK+ +D  K   R+K  E  
Sbjct: 28  KLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKLVSGKAGDD-TKGPDRDKAKELL 86

Query: 251 ELLKASKDQNDDVTKINV----PTVGSTLQNKNTIPVHDISKARSITHQQGNKNIQNATQ 418
           EL K  K +    +  ++     + G+    + +     IS +     Q  + ++ + +Q
Sbjct: 87  ELSKIVKQKASSASGPSIVSSSTSQGAAKSQQGSSKAGQISVSPPAGKQNTSPSLAHGSQ 146

Query: 419 A-----IVDEFKYGFPSDGLSRTSNKWWGSST-------TDSKKDAHGKEDNQQSEKPVN 562
           A      +D+FKYGFPS GLS  + KWWG+S+        D   +AH    ++ S+   +
Sbjct: 147 AKAIPSYMDDFKYGFPSSGLSCETMKWWGTSSDTDCVPAKDGSHEAHDLTTHEPSKGMTD 206

Query: 563 DSPSKDKVDSQSGKDESNNIPELSGTGLLTTVRKRAVDEGREALKLGVHQFSGINKPGKR 742
           D       D    + E++       +  L ++R++AVD+GR+ L  G  +    ++  KR
Sbjct: 207 DDELDWGADEAEAEAEADGAVTAEASAQLCSLRRKAVDDGRKLLNGGNRRGQEFSRLNKR 266

Query: 743 EQRLLLGIFGSSLP 784
           ++ +L  +FG+SLP
Sbjct: 267 QKLVLAQVFGASLP 280


>emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]
          Length = 302

 Score =  134 bits (336), Expect = 5e-29
 Identities = 95/268 (35%), Positives = 132/268 (49%), Gaps = 63/268 (23%)
 Frame = +2

Query: 194 KSIEDIIKEASREKKMEPAELLKASKDQNDDVTKINVPT--------------------- 310
           +S+E+I K A+RE+  E A+L K     ND +T   V                       
Sbjct: 37  ESVEEIKKYAARERNKELAQLSKVDVQGNDALTSSAVSAAFFFIGWMSKCLGDLRGGPAG 96

Query: 311 ---------------VGSTLQNKNTIPVHDISKARS-----ITHQQGNKNIQNATQ---- 418
                          +GS  QN     +  +SK        +  QQG++NIQN       
Sbjct: 97  GLGASCLPRWPPDCHIGSQPQNDTKSSLWKMSKLHGAIPPHMLQQQGSRNIQNGRPQNLP 156

Query: 419 ---------AIVDEFKYGFPSDGLSRTSNKWWGSSTTDSKKDAHG------KEDNQQSEK 553
                    A +DEFKYGFP+ GL+  SNKWWGSS+ D  +   G      +ED +QSE+
Sbjct: 157 NASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTIGNGVEIDEEDKKQSEQ 216

Query: 554 PVNDSPS---KDKVDSQSGKDESNNIPELSGTGLLTTVRKRAVDEGREALKLGVHQFSGI 724
             ++  +    D   +++ K+E    P+  GTGLLT VRK  V+EGR+ LK+GV +  G+
Sbjct: 217 LADNGANLLVMDGEKAENEKEEGTIGPQ--GTGLLTAVRKTTVEEGRKILKIGVGRDHGV 274

Query: 725 NKPGKREQRLLLGIFGSSLPKDWWDGSS 808
            K GK+E+RLLL IFGSSLP  W +GSS
Sbjct: 275 LKAGKKERRLLLQIFGSSLPSQWINGSS 302


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