BLASTX nr result

ID: Panax21_contig00022209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022209
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5...   126   2e-27
emb|CBI21514.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002310031.1| ABC transporter family protein [Populus tric...   114   8e-24
ref|XP_002306353.1| ABC transporter family protein [Populus tric...   112   3e-23
ref|XP_003602495.1| ABC transporter F family member [Medicago tr...   111   5e-23

>ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5 [Vitis vinifera]
          Length = 718

 Score =  126 bits (316), Expect = 2e-27
 Identities = 73/146 (50%), Positives = 92/146 (63%)
 Frame = -2

Query: 440 ITPTNCSIKGITLFNPRNSQNNRILAKLXXXXXXXXXXXVKDDIESLFSDDSSEKVNYKR 261
           IT +N SIK   LFN R ++++ + +K             ++DIESLFS++S ++   KR
Sbjct: 50  ITGSNSSIKTSALFNSR-TRSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKR 108

Query: 260 GNRQXXXXXXXXXXXIRLENVSKSYKGVTVLKDINWEXXXXXXXXXXXXXGAGKTTQMRI 81
            N+Q           +RLENVSK YKGVTVLKD++WE             GAGKTTQ+RI
Sbjct: 109 VNKQSNSGASSISSGVRLENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRI 168

Query: 80  IAGLEEPDSGNVIKAKSNMKISFLSQ 3
           I GLEEPDSGNVIKAK NMKI+FLSQ
Sbjct: 169 ITGLEEPDSGNVIKAKMNMKIAFLSQ 194


>emb|CBI21514.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  124 bits (312), Expect = 6e-27
 Identities = 72/145 (49%), Positives = 91/145 (62%)
 Frame = -2

Query: 437 TPTNCSIKGITLFNPRNSQNNRILAKLXXXXXXXXXXXVKDDIESLFSDDSSEKVNYKRG 258
           T +N SIK   LFN R ++++ + +K             ++DIESLFS++S ++   KR 
Sbjct: 28  TGSNSSIKTSALFNSR-TRSSMVSSKAVAMDTSVAETMSREDIESLFSNNSVDEAYQKRV 86

Query: 257 NRQXXXXXXXXXXXIRLENVSKSYKGVTVLKDINWEXXXXXXXXXXXXXGAGKTTQMRII 78
           N+Q           +RLENVSK YKGVTVLKD++WE             GAGKTTQ+RII
Sbjct: 87  NKQSNSGASSISSGVRLENVSKGYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRII 146

Query: 77  AGLEEPDSGNVIKAKSNMKISFLSQ 3
            GLEEPDSGNVIKAK NMKI+FLSQ
Sbjct: 147 TGLEEPDSGNVIKAKMNMKIAFLSQ 171


>ref|XP_002310031.1| ABC transporter family protein [Populus trichocarpa]
           gi|222852934|gb|EEE90481.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 635

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/106 (58%), Positives = 72/106 (67%)
 Frame = -2

Query: 320 KDDIESLFSDDSSEKVNYKRGNRQXXXXXXXXXXXIRLENVSKSYKGVTVLKDINWEXXX 141
           K DIESLFS +S  + + KR N+Q           I+LEN+SKSYKGVTVLKD+ WE   
Sbjct: 6   KTDIESLFSSNSDVEFDRKRSNKQSNGGASGISSGIKLENISKSYKGVTVLKDVTWEVKK 65

Query: 140 XXXXXXXXXXGAGKTTQMRIIAGLEEPDSGNVIKAKSNMKISFLSQ 3
                     GAGKTTQ+RII G EEPDSGNVIKAK+NMKI+FLSQ
Sbjct: 66  GEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKANMKIAFLSQ 111


>ref|XP_002306353.1| ABC transporter family protein [Populus trichocarpa]
           gi|222855802|gb|EEE93349.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 722

 Score =  112 bits (280), Expect = 3e-23
 Identities = 67/144 (46%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
 Frame = -2

Query: 431 TNCSIKGITLFN-PRNSQNNRILAKLXXXXXXXXXXXVKDDIESLFSDDSSEKVNYKRGN 255
           T  +I     FN P    N++I A+L            + D ESLFS +S    +  R  
Sbjct: 36  TKFTINNTNSFNFPTRRPNSKIKARLSTATVETSVAEPETDTESLFSSNSDVDFDKNRLR 95

Query: 254 RQXXXXXXXXXXXIRLENVSKSYKGVTVLKDINWEXXXXXXXXXXXXXGAGKTTQMRIIA 75
           +Q           I+LEN+SKSYKGVTVLKD+ WE             GAGKTTQ+RI+ 
Sbjct: 96  KQSNRGASGISSGIKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIMT 155

Query: 74  GLEEPDSGNVIKAKSNMKISFLSQ 3
           GLEEPDSGNVIKAK+NMKI+FLSQ
Sbjct: 156 GLEEPDSGNVIKAKANMKIAFLSQ 179


>ref|XP_003602495.1| ABC transporter F family member [Medicago truncatula]
           gi|355491543|gb|AES72746.1| ABC transporter F family
           member [Medicago truncatula]
          Length = 700

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KDDIESLFSDDSSEKVNYKRGN-RQXXXXXXXXXXXIRLENVSKSYKGVTVLKDINWEXX 144
           +DDIESLF+D S+++   +RGN +Q           ++LEN+ K+YKGVTVLK++NWE  
Sbjct: 73  EDDIESLFTDTSADE---RRGNNKQSNTGASSVSSGVKLENIRKTYKGVTVLKEVNWEVK 129

Query: 143 XXXXXXXXXXXGAGKTTQMRIIAGLEEPDSGNVIKAKSNMKISFLSQ 3
                      GAGKTTQMRIIAGLEEPDSGNVIKAK NMKI+FLSQ
Sbjct: 130 KGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVIKAKPNMKIAFLSQ 176


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