BLASTX nr result

ID: Panax21_contig00022198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022198
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   117   8e-25
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   117   8e-25
ref|XP_004135688.1| PREDICTED: zinc finger CCCH domain-containin...   100   9e-20
emb|CBI27968.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...    99   3e-19

>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score =  117 bits (294), Expect = 8e-25
 Identities = 64/130 (49%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
 Frame = -3

Query: 401 CEYAHGVFECWLHPARYRTQPCKDGTLCRRKVCFFAHTPDQXXXXXXXXXXXLGGFMTES 222
           CE+AHGVFECWLHPARYRTQPCKDG+ CRR+VCFFAHTP+Q            G    ES
Sbjct: 151 CEFAHGVFECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGS--AES 208

Query: 221 YDCSQSRLGIDSFLGKPSFGXXXXXXXXXXXXXXXXXXXXXXXPCGSL--GFNSVSELAG 48
           YD S  RL  D +L K SF                           S    FNS+SEL  
Sbjct: 209 YDGSPLRLAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVA 268

Query: 47  SMRSLQIGKA 18
           SMR+LQ+GKA
Sbjct: 269 SMRNLQVGKA 278


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  117 bits (294), Expect = 8e-25
 Identities = 64/130 (49%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
 Frame = -3

Query: 401 CEYAHGVFECWLHPARYRTQPCKDGTLCRRKVCFFAHTPDQXXXXXXXXXXXLGGFMTES 222
           CE+AHGVFECWLHPARYRTQPCKDG+ CRR+VCFFAHTP+Q            G    ES
Sbjct: 198 CEFAHGVFECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGS--AES 255

Query: 221 YDCSQSRLGIDSFLGKPSFGXXXXXXXXXXXXXXXXXXXXXXXPCGSL--GFNSVSELAG 48
           YD S  RL  D +L K SF                           S    FNS+SEL  
Sbjct: 256 YDGSPLRLAFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVA 315

Query: 47  SMRSLQIGKA 18
           SMR+LQ+GKA
Sbjct: 316 SMRNLQVGKA 325


>ref|XP_004135688.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Cucumis sativus]
          Length = 382

 Score =  100 bits (250), Expect = 9e-20
 Identities = 54/133 (40%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
 Frame = -3

Query: 401 CEYAHGVFECWLHPARYRTQPCKDGTLCRRKVCFFAHTPDQXXXXXXXXXXXLGGFMTES 222
           CE+AHGVFECWLHPARYRTQPCKDGT CRR+VCFFAHTP+Q                 +S
Sbjct: 154 CEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANS--PDS 211

Query: 221 YDCSQSRLGIDSFLGK--PSFGXXXXXXXXXXXXXXXXXXXXXXXPCGSLGFNSVSELAG 48
           YD S  R  +D    K  P                             SLG  S++E+  
Sbjct: 212 YDESPLRQSVDGSCSKTLPFLSSPVSVSPTATPVDSPPLSPMTRSLGRSLGSTSINEMVA 271

Query: 47  SMRSLQIGKASRM 9
           S+R+L + K   +
Sbjct: 272 SLRNLHLSKVKSL 284


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/127 (42%), Positives = 65/127 (51%)
 Frame = -3

Query: 401 CEYAHGVFECWLHPARYRTQPCKDGTLCRRKVCFFAHTPDQXXXXXXXXXXXLGGFMTES 222
           CE+AHGVFECWLHPARYRTQPCKDG  CRR+VCFFAHT +Q            G    ES
Sbjct: 136 CEFAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGS--VES 193

Query: 221 YDCSQSRLGIDSFLGKPSFGXXXXXXXXXXXXXXXXXXXXXXXPCGSLGFNSVSELAGSM 42
           YD S  R  +++   K                              SLG NS++E+  S+
Sbjct: 194 YDGSPLRQALEASCAK------------------TLPFMSSPGLSRSLGSNSINEMVASL 235

Query: 41  RSLQIGK 21
           R LQ+ K
Sbjct: 236 RQLQLSK 242


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/138 (41%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
 Frame = -3

Query: 401 CEYAHGVFECWLHPARYRTQPCKDGTLCRRKVCFFAHTPDQXXXXXXXXXXXLGGFMTES 222
           CEYAHGVFECWLHPARYRTQPCKDGT CRR+VCFFAHTPDQ                 +S
Sbjct: 134 CEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPR-----SADS 188

Query: 221 YDCSQSRLGIDS-------FLGKPSFGXXXXXXXXXXXXXXXXXXXXXXXPCGSLGFNSV 63
           YD S  R  I+S       F+  P                                  SV
Sbjct: 189 YDGSPLRHAIESSCAKSHPFVASPGSASSPVESPPMSPMTV-----------------SV 231

Query: 62  SELAGSMRSLQIGKASRM 9
           +E+  S+R+LQ+GK   +
Sbjct: 232 NEMVASLRNLQLGKVKSL 249


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