BLASTX nr result

ID: Panax21_contig00022193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022193
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...   199   9e-49
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   163   9e-38
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   162   1e-37
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-37
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   157   4e-36

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  199 bits (507), Expect = 9e-49
 Identities = 124/403 (30%), Positives = 204/403 (50%), Gaps = 26/403 (6%)
 Frame = -2

Query: 1135 NSYSQWSDLPNELLDMILSKMSFISILNFRAVCPSWRTAAKSYILSSSYPQVHQVPWLML 956
            +S  +W  L  ++L  IL+++SF+ +   + VC  W + AK   L   Y + H++PWL++
Sbjct: 24   SSMPKWGQLVGDVLLQILNRLSFVDVQRAKTVCSHWNSVAKQLKL---YTKFHRIPWLLI 80

Query: 955  PPEQEDDN-----DFRFFSLEDKKVIKRLNRPQDLNVPQKFHNGLCLGSSHGWLVVLD-E 794
            PP+ E+ N     + + FS+ED ++             Q F    C+GSSHG+++ ++ E
Sbjct: 81   PPQDEESNASSDTNTKLFSIEDGQLYSSKYAASKEICCQSF----CVGSSHGYMISINCE 136

Query: 793  KVQPYLFDPFYLTQIQLPDIDTAEVFKFPKSDDNGYDVVPYYGSSGSILHI----ESVHD 626
            +   ++F+P    + +LP +DT         D+ G  ++ +   + S             
Sbjct: 137  RNNLFVFNPLTEKRTELPAMDTFLGRIIEDMDNGGEYLIKFAPEASSDSRFYRGWTCSRQ 196

Query: 625  LRGYFFSNAVISANPYHNNWQFYALMIASFGDLGSQLMFFRAGDFH--TWMLLGEVDDQY 452
            LR +F   A++S +P HN      L+        S++ F + GD    +WM L  +D  +
Sbjct: 197  LREHFIQKAILSCDPCHNKSYGVVLICCQ----NSRIAFCQCGDSGAMSWMYLEGMDAPF 252

Query: 451  CDIVCYNDRFYALNYPDKVEVWDTNIYT-PVKDSVVVAPLP-EIIMETRYSLRNYCTHRA 278
             DI+C+ ++ Y L     + VWD    + PV    + +      + +T     +  T R 
Sbjct: 253  VDIMCHENKLYVLANCGSLAVWDLGSDSFPVSTKTITSLFSCASLRQTLNVSSDLYTSRL 312

Query: 277  YLVQSCDDLLLVLRYLGEFVDEDGVAIHGED------------TYKTLLFLVFKLDFSTS 134
            YLV+S   +LLV+R +GEFVDE+G  +H  D             Y+TLLF +F++DF   
Sbjct: 313  YLVESSGGVLLVVRRIGEFVDEEGRVLHEGDLLTDKAAEPLVCAYRTLLFGLFRMDFDKE 372

Query: 133  QWVEVESLGDQVLFLGGIQSMSLSTRDVPACQANSIYFTDDYW 5
             WV + SL DQ +F+GG  S S+ T D+P C+ NS+YFTDDYW
Sbjct: 373  TWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYW 415


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  163 bits (412), Expect = 9e-38
 Identities = 122/381 (32%), Positives = 184/381 (48%), Gaps = 8/381 (2%)
 Frame = -2

Query: 1126 SQWSDLPNELLDMILSKMS-FISILNFRAVCPSWRTAAKSYILSSSYPQVHQVPWLMLPP 950
            + WS L  ELLD I  K   +   + FRAVC +WR +    +  + +    Q+PWLMLP 
Sbjct: 2    ADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS----VPKTPHHLPTQLPWLMLPQ 57

Query: 949  EQEDDNDFRFFSLEDKKVIKRLNRPQDLNVPQKFHNGLCLGSSHGWLVVLDEKVQPYLFD 770
             Q       FFSL        LN+   L +P+  H     GSSHGWL++LDE  + +L +
Sbjct: 58   SQPHHTHRPFFSLS-------LNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLN 110

Query: 769  PFYLTQIQLPDIDT-AEVFKFPKSDDNGYDVVPYYG---SSGSILHIESVHDLRGYFFSN 602
            P   +++ LP + T   V +F     N  DV   Y    SSG + +  S+  +R  F   
Sbjct: 111  PLTRSKVHLPPLSTFPNVVRF-----NFADVGREYALRTSSGDV-YTRSLKKMRDSFIKK 164

Query: 601  AVISANPYHNNWQFYALMIASFGDLGSQLMFFRAGDFHTWMLLGEVDDQYCDIVCYNDRF 422
             ++S++P + +     +++   GDL       R  D  +W  L +      D++ +   F
Sbjct: 165  TILSSSPANGSDFIAVVILNQTGDLA----LCRKSD-DSWTFLEDAQSYAEDVIFHRGLF 219

Query: 421  YALNYPDKVEVWDTNIYTPVKDSVVVAPLPEIIMETRYSLRNYCTHRAYLVQSCDDLLLV 242
            YA+N    + V D +  +P + S++  P            + +     YLV+S ++LLLV
Sbjct: 220  YAVNKYGSIAVCDVSGSSP-RVSIIEMP------------QQFGGDLQYLVESGEELLLV 266

Query: 241  LRYLGEFVDEDGVAIHGEDT---YKTLLFLVFKLDFSTSQWVEVESLGDQVLFLGGIQSM 71
             RYL    D     +  + T   Y+T  F V +LD    +W  V SLGD+ LFLG   S+
Sbjct: 267  TRYLDLTYD-----VEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSL 321

Query: 70   SLSTRDVPACQANSIYFTDDY 8
            SLS+ D P C+ N IY+TDDY
Sbjct: 322  SLSSVDFPGCKGNCIYYTDDY 342


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  162 bits (411), Expect = 1e-37
 Identities = 122/381 (32%), Positives = 184/381 (48%), Gaps = 8/381 (2%)
 Frame = -2

Query: 1126 SQWSDLPNELLDMILSKMS-FISILNFRAVCPSWRTAAKSYILSSSYPQVHQVPWLMLPP 950
            + WS L  ELLD I  K   +   + FRAVC +WR +    +  + +    Q+PWLMLP 
Sbjct: 2    ADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS----VPKTPHHLPTQLPWLMLPQ 57

Query: 949  EQEDDNDFRFFSLEDKKVIKRLNRPQDLNVPQKFHNGLCLGSSHGWLVVLDEKVQPYLFD 770
             Q       FFSL        LN+   L +P+  H     GSSHGWL++LDE  + +L +
Sbjct: 58   SQPHHTHRPFFSLS-------LNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLN 110

Query: 769  PFYLTQIQLPDIDT-AEVFKFPKSDDNGYDVVPYYG---SSGSILHIESVHDLRGYFFSN 602
            P   +++ LP + T   V +F     N  DV   Y    SSG + +  S+  +R  F   
Sbjct: 111  PLTRSKVHLPPLSTFPNVVRF-----NFADVGREYALRTSSGDV-YTRSLKKMRDSFIKK 164

Query: 601  AVISANPYHNNWQFYALMIASFGDLGSQLMFFRAGDFHTWMLLGEVDDQYCDIVCYNDRF 422
             ++S++P + +     +++   GDL       R  D  +W  L +      D++ +   F
Sbjct: 165  TILSSSPANGSDFIAVVILNQTGDLA----LCRKSD-DSWTFLEDAQSYSEDVIFHRGLF 219

Query: 421  YALNYPDKVEVWDTNIYTPVKDSVVVAPLPEIIMETRYSLRNYCTHRAYLVQSCDDLLLV 242
            YA+N    + V D +  +P + S++  P            + +     YLV+S ++LLLV
Sbjct: 220  YAVNKYGSIAVCDVSGSSP-RVSIIEMP------------QQFGGDLQYLVESGEELLLV 266

Query: 241  LRYLGEFVDEDGVAIHGEDT---YKTLLFLVFKLDFSTSQWVEVESLGDQVLFLGGIQSM 71
             RYL    D     +  + T   Y+T  F V +LD    +W  V SLGD+ LFLG   S+
Sbjct: 267  TRYLDLTYD-----VEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSL 321

Query: 70   SLSTRDVPACQANSIYFTDDY 8
            SLS+ D P C+ N IY+TDDY
Sbjct: 322  SLSSVDFPGCKGNCIYYTDDY 342


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  160 bits (404), Expect = 8e-37
 Identities = 124/379 (32%), Positives = 182/379 (48%), Gaps = 6/379 (1%)
 Frame = -2

Query: 1120 WSDLPNELLDMILSKMSFIS-ILNFRAVCPSWRTAAKSYILSSSYPQVHQVPWLMLPPEQ 944
            W+ LP EL+++I  K++  S  L+F+AVC +W    KS I  +      Q+PWL+LP  Q
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAW----KSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 943  EDDNDFR-FFSLEDKKVIKRLNRPQDLNVPQKFHNGLCLGSSHGWLVVLDEKVQPYLFDP 767
             + + +R FF+L   K          LN+P+  H     GSSHGWL++LD+     + +P
Sbjct: 61   SNQSSYRAFFNLSTYKF-------HSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINP 113

Query: 766  FYLTQIQLPDIDT-AEVFKFPKSD-DNGYDVVPYYGSSGSILHIESVHDLRGYFFSNAVI 593
                +I LP I +   V  F  ++    Y +V   G   +     S+  +R  F    V+
Sbjct: 114  LTRRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTA----SLRQMRDGFIKKVVM 169

Query: 592  SANPYHNNWQFYALM--IASFGDLGSQLMFFRAGDFHTWMLLGEVDDQYCDIVCYNDRFY 419
            S++P      F+  M  + S GDL     + + GD   W ++        D++ +N  FY
Sbjct: 170  SSSPLEKKGDFFVAMAILCSTGDLA----YCKNGD-ECWNIVENSRSFSEDVIYFNGLFY 224

Query: 418  ALNYPDKVEVWDTNIYTPVKDSVVVAPLPEIIMETRYSLRNYCTHRAYLVQSCDDLLLVL 239
            A+N   ++ V D N  +P K S +  P            R       YLV S D LLLV 
Sbjct: 225  AVNKAGQIVVCDVNGNSP-KVSFIETP------------RQIGGDMQYLVSSGDGLLLVT 271

Query: 238  RYLGEFVDEDGVAIHGEDTYKTLLFLVFKLDFSTSQWVEVESLGDQVLFLGGIQSMSLST 59
            RYL   V+ D         YKT  F VFKLD +  +W  V SLGD +LF+G   S++LS 
Sbjct: 272  RYLDLDVEFDIFI------YKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSA 325

Query: 58   RDVPACQANSIYFTDDYWA 2
              +  C  + IY+TDDY A
Sbjct: 326  SGLSGCMGDCIYYTDDYSA 344


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  157 bits (398), Expect = 4e-36
 Identities = 124/376 (32%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
 Frame = -2

Query: 1120 WSDLPNELLDMILSKMSFIS-ILNFRAVCPSWRTAAKSYILSSSYPQVHQVPWLMLPPEQ 944
            WS LP EL+++I   ++  S  L  RAVC +WR +    I  +      Q+PWLMLP  Q
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS----IPKTPNHLPPQLPWLMLPQSQ 60

Query: 943  EDDNDFR--FFSLEDKKVIKRLNRPQDLNVPQKFHNGLCLGSSHGWLVVLDEKVQPYLFD 770
               N  R  FFSL   K          LN+P+  +     GSSHGWL++LD+     L +
Sbjct: 61   SQSNQSRRAFFSLSTNKF-------HFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLIN 113

Query: 769  PFYLTQIQLPDIDT-AEVFKFPKSD-DNGYDVVPYYGSSGSILHIESVHDLRGYFFSNAV 596
            P    ++ LP + +   V  F  SD    Y +    G   ++    S+  +R  F    V
Sbjct: 114  PLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTV----SLRQMRDSFIRKVV 169

Query: 595  ISANPYHNNWQFYALMIASFGDLGSQLMFFRAGDFHTWMLLGEVDDQYCDIVCYNDRFYA 416
            +S++P  +N  F  + I +  D    L + R GD  +W L+        D++  N  FYA
Sbjct: 170  LSSSPLKDN-NFVVIAILNQTD---DLAYCRNGD-KSWSLVENARSFCEDVIFVNGMFYA 224

Query: 415  LNYPDKVEVWDTNIYTPVKDSVVVAPLPEIIMETRYSLRNYCTHRAYLVQSCDDLLLVLR 236
            +N   ++ + D +      DS  V+      MET    R       YLV S D+LLLV R
Sbjct: 225  VNKAGQIVICDIS-----SDSPRVS-----FMETP---RQAGGDMQYLVNSGDELLLVTR 271

Query: 235  YLGEFVDEDGVAIHGEDTYKTLLFLVFKLDFSTSQWVEVESLGDQVLFLGGIQSMSLSTR 56
            YL    + D   +     Y+T+ F VF+LD++  QW+ + +LGD+ LF+G   S+SLS  
Sbjct: 272  YLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSAT 331

Query: 55   DVPACQANSIYFTDDY 8
            D   C  N IY+TDDY
Sbjct: 332  DFSGCMGNCIYYTDDY 347


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