BLASTX nr result

ID: Panax21_contig00022169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00022169
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   313   1e-83
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   284   8e-75
ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2...   283   1e-74
ref|XP_003616828.1| Nuclear ribonuclease Z [Medicago truncatula]...   282   3e-74
ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arab...   280   2e-73

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
           gi|297739240|emb|CBI28891.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  313 bits (803), Expect = 1e-83
 Identities = 155/207 (74%), Positives = 171/207 (82%), Gaps = 1/207 (0%)
 Frame = +3

Query: 3   SPFHQPNWQPNFLIPKPNPYNNLSVTRNYNNAGLVDLQAVKGSGFLSAIGNAIEEEE-YR 179
           SP   P  QP   IPKP+P + ++   +            KGSG+LS IG AIEEEE YR
Sbjct: 16  SPLPNPTPQPPLTIPKPHPKSYITAHSS----------RPKGSGYLSLIGRAIEEEEEYR 65

Query: 180 KARAEVNRKGADLAGYSIEGISVGGHETCVIVPELKSAFDIGRCPAKAVQQNFLFISHAH 359
           KARAEV R G DL GYSIEGIS+GGHETCVI+PELKSAFDIGRCP++A+QQNFLFI+HAH
Sbjct: 66  KARAEVARNGVDLEGYSIEGISIGGHETCVIIPELKSAFDIGRCPSRAIQQNFLFITHAH 125

Query: 360 LDHIGGLPMYVATRGLYNLKPPTVFVPPCIKEDVEKLIDIHRVMGQVELNLDLVALDIGE 539
           LDHIGGLPMYVATRGLYNLKPPT+FVPPCIKEDVEKL DIHR + QVEL LDLVALD+GE
Sbjct: 126 LDHIGGLPMYVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGE 185

Query: 540 TYEMRNDLVVRPFKTHHVIPSQGYVIY 620
           TYEMRN+LVVRPFKTHHVIPSQGYVIY
Sbjct: 186 TYEMRNNLVVRPFKTHHVIPSQGYVIY 212


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
           gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
           putative [Ricinus communis]
          Length = 361

 Score =  284 bits (727), Expect = 8e-75
 Identities = 134/169 (79%), Positives = 154/169 (91%), Gaps = 1/169 (0%)
 Frame = +3

Query: 117 AVKGSGFLSAIGNAIEEEE-YRKARAEVNRKGADLAGYSIEGISVGGHETCVIVPELKSA 293
           ++K +G+LSAIG  IEEEE YRKARA V RKG DL GYSIEG+S+GG ETC+I+PE K A
Sbjct: 51  SLKSTGYLSAIGRVIEEEEEYRKARAAVIRKGIDLEGYSIEGLSIGGQETCLIIPEFKCA 110

Query: 294 FDIGRCPAKAVQQNFLFISHAHLDHIGGLPMYVATRGLYNLKPPTVFVPPCIKEDVEKLI 473
           FDIGRCP++A+ QNF+FI+HAHLDHIGGLPMYVA+RGLYNLKPPTVFVPPCIKEDVEKL 
Sbjct: 111 FDIGRCPSRAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLF 170

Query: 474 DIHRVMGQVELNLDLVALDIGETYEMRNDLVVRPFKTHHVIPSQGYVIY 620
           DIHR MGQVELNL+LVALD+GETYE+RN++VVRPF+T HVIPSQGYVIY
Sbjct: 171 DIHRSMGQVELNLELVALDVGETYELRNNVVVRPFRTQHVIPSQGYVIY 219


>ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  283 bits (725), Expect = 1e-74
 Identities = 133/168 (79%), Positives = 150/168 (89%), Gaps = 1/168 (0%)
 Frame = +3

Query: 120 VKGSGFLSAIGNAIEEEE-YRKARAEVNRKGADLAGYSIEGISVGGHETCVIVPELKSAF 296
           VK S FLS IG AIEEEE YRKARA V RKG DL GY+IEG+S+GG ETC+I+PE K AF
Sbjct: 57  VKASSFLSEIGRAIEEEEDYRKARAAVIRKGIDLGGYAIEGLSIGGQETCIIIPEFKCAF 116

Query: 297 DIGRCPAKAVQQNFLFISHAHLDHIGGLPMYVATRGLYNLKPPTVFVPPCIKEDVEKLID 476
           DIGRCP +A+ QNF+FI+HAHLDHIGGLPMYVA+RGLY+LKPPT+FVPPCIK+DVEKL D
Sbjct: 117 DIGRCPTRAIHQNFVFITHAHLDHIGGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFD 176

Query: 477 IHRVMGQVELNLDLVALDIGETYEMRNDLVVRPFKTHHVIPSQGYVIY 620
           IHR MGQVELN DLVALD+GETYE+RND+VVRPF+T HVIPSQGYVIY
Sbjct: 177 IHRAMGQVELNFDLVALDVGETYELRNDVVVRPFRTQHVIPSQGYVIY 224


>ref|XP_003616828.1| Nuclear ribonuclease Z [Medicago truncatula]
           gi|355518163|gb|AES99786.1| Nuclear ribonuclease Z
           [Medicago truncatula]
          Length = 357

 Score =  282 bits (722), Expect = 3e-74
 Identities = 132/210 (62%), Positives = 166/210 (79%), Gaps = 5/210 (2%)
 Frame = +3

Query: 6   PFHQPNWQPNFLIPK----PNPYNNLSVTRNYNNAGLVDLQAVKGSGFLSAIGNAIE-EE 170
           P   P ++P  + P     P+P   LS   N          ++KGSG+LS I  AI+ EE
Sbjct: 16  PLTNPTFKPPQIFPFHHTIPSPKQQLSFPTN----------SLKGSGYLSEISKAIDYEE 65

Query: 171 EYRKARAEVNRKGADLAGYSIEGISVGGHETCVIVPELKSAFDIGRCPAKAVQQNFLFIS 350
           +YR A+++V RKG DL GYSIEG+S+GGHETC+I+PE K AFDIGRCP +A+ QNF+FI+
Sbjct: 66  QYRVAKSQVQRKGLDLEGYSIEGVSIGGHETCIIIPEFKCAFDIGRCPTRAIHQNFVFIT 125

Query: 351 HAHLDHIGGLPMYVATRGLYNLKPPTVFVPPCIKEDVEKLIDIHRVMGQVELNLDLVALD 530
           HAHLDHIGGLPMY+ +RGLYNLKPPTVFVPPCIK+DV+KL+D+H+ +GQVELN +LVALD
Sbjct: 126 HAHLDHIGGLPMYIGSRGLYNLKPPTVFVPPCIKDDVQKLLDVHKTLGQVELNCELVALD 185

Query: 531 IGETYEMRNDLVVRPFKTHHVIPSQGYVIY 620
           +GETYE+RNDLVVRPF+T HVIPSQGY++Y
Sbjct: 186 VGETYEIRNDLVVRPFRTQHVIPSQGYIVY 215


>ref|XP_002883646.1| hypothetical protein ARALYDRAFT_480092 [Arabidopsis lyrata subsp.
           lyrata] gi|297329486|gb|EFH59905.1| hypothetical protein
           ARALYDRAFT_480092 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score =  280 bits (715), Expect = 2e-73
 Identities = 132/168 (78%), Positives = 151/168 (89%), Gaps = 1/168 (0%)
 Frame = +3

Query: 120 VKGSGFLSAIGNAIEEEE-YRKARAEVNRKGADLAGYSIEGISVGGHETCVIVPELKSAF 296
           VK SG+ S+I  AIEEEE YRKARA VNRKG +L  Y+IEGISVGGHETCVIVPELK  F
Sbjct: 44  VKVSGYFSSISRAIEEEEEYRKARAAVNRKGVELESYAIEGISVGGHETCVIVPELKCVF 103

Query: 297 DIGRCPAKAVQQNFLFISHAHLDHIGGLPMYVATRGLYNLKPPTVFVPPCIKEDVEKLID 476
           DIGRCP++A+QQ FLFI+HAHLDHIGGLPMYVA+RGLYNL+PP +FVPP IKEDVEKL++
Sbjct: 104 DIGRCPSRAIQQKFLFITHAHLDHIGGLPMYVASRGLYNLEPPKIFVPPSIKEDVEKLLE 163

Query: 477 IHRVMGQVELNLDLVALDIGETYEMRNDLVVRPFKTHHVIPSQGYVIY 620
           IHR MGQVELN++L+ LD+GETYE+RND+VVRPF THHVIPSQGYVIY
Sbjct: 164 IHRTMGQVELNVELIPLDVGETYELRNDIVVRPFATHHVIPSQGYVIY 211


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